RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 PYGO2Q9BRQ0 406 aa4.3□□□□□ -1.72
CD46-213ENST00000471987 OR14J1Q9UGF5 321 aa4.3□□□□□ -1.72
CD46-213ENST00000471987 INTS6Q9UL03 887 aaKnown RBP4.3□□□□□ -1.72
CD46-213ENST00000471987 H0YIN7 160 aa4.29□□□□□ -1.72
CD46-213ENST00000471987 HOXC11O43248 304 aaPredicted RBP4.29□□□□□ -1.72
CD46-213ENST00000471987 CD48P09326 243 aa4.29□□□□□ -1.72
CD46-213ENST00000471987 CCT5P48643 541 aa4.29□□□□□ -1.72
CD46-213ENST00000471987 TBX2Q13207 712 aaPredicted RBP4.29□□□□□ -1.72
CD46-213ENST00000471987 LPAL2Q16609 132 aa4.29□□□□□ -1.72
CD46-213ENST00000471987 ASPRV1Q53RT3 343 aa4.29□□□□□ -1.72
CD46-213ENST00000471987 ZNF790Q6PG37 636 aa4.29□□□□□ -1.72
CD46-213ENST00000471987 ANO5Q75V66 913 aa4.29□□□□□ -1.72
CD46-213ENST00000471987 LONP2Q86WA8 852 aa4.29□□□□□ -1.72
CD46-213ENST00000471987 UTP15Q8TED0 518 aaKnown RBP4.29□□□□□ -1.72
CD46-213ENST00000471987 INTS10Q9NVR2 710 aaKnown RBP4.29□□□□□ -1.72
CD46-213ENST00000471987 UBA2Q9UBT2 640 aaPredicted RBP4.29□□□□□ -1.72
CD46-213ENST00000471987 STK39Q9UEW8 545 aa4.29□□□□□ -1.72
CD46-213ENST00000471987 GJD2Q9UKL4 321 aa4.29□□□□□ -1.72
CD46-213ENST00000471987 CAMK2AQ9UQM7 478 aa4.29□□□□□ -1.72
CD46-213ENST00000471987 A0A0G2JNG1 304 aa4.28□□□□□ -1.72
CD46-213ENST00000471987 C5orf60A6NFR6 353 aa4.28□□□□□ -1.72
CD46-213ENST00000471987 EIF3CLB5ME19 914 aaKnown RBP4.28□□□□□ -1.72
CD46-213ENST00000471987 TMEM178BH3BS89 294 aa4.28□□□□□ -1.72
CD46-213ENST00000471987 IFRD1O00458 451 aaPredicted RBP4.28□□□□□ -1.72
CD46-213ENST00000471987 F9P00740 461 aa4.28□□□□□ -1.72
CD46-213ENST00000471987 TSHBP01222 138 aa4.28□□□□□ -1.72
CD46-213ENST00000471987 IL7RP16871 459 aa4.28□□□□□ -1.72
CD46-213ENST00000471987 ZNF26P17031 533 aaPredicted RBP4.28□□□□□ -1.72
CD46-213ENST00000471987 CLK1P49759 484 aaKnown RBP4.28□□□□□ -1.72
CD46-213ENST00000471987 MBTD1Q05BQ5 628 aa4.28□□□□□ -1.72
CD46-213ENST00000471987 KIR2DS5Q14953 304 aa4.28□□□□□ -1.72
CD46-213ENST00000471987 ZFP69Q49AA0 526 aa4.28□□□□□ -1.72
CD46-213ENST00000471987 LCN10Q6JVE6 187 aa4.28□□□□□ -1.72
CD46-213ENST00000471987 TSSK4Q6SA08 328 aa4.28□□□□□ -1.72
CD46-213ENST00000471987 PLXDC2Q6UX71 529 aa4.28□□□□□ -1.72
CD46-213ENST00000471987 OXNAD1Q96HP4 312 aaPredicted RBP4.28□□□□□ -1.72
CD46-213ENST00000471987 LINC00479Q96M42 142 aa4.28□□□□□ -1.72
CD46-213ENST00000471987 SCLT1Q96NL6 688 aa4.28□□□□□ -1.72
CD46-213ENST00000471987 OPRPNQ99935 248 aaPredicted RBP4.28□□□□□ -1.72
CD46-213ENST00000471987 SLC25A18Q9H1K4 315 aa4.28□□□□□ -1.72
CD46-213ENST00000471987 RAD21L1Q9H4I0 556 aa4.28□□□□□ -1.72
CD46-213ENST00000471987 ERVMER34-1Q9H9K5 563 aa4.28□□□□□ -1.72
CD46-213ENST00000471987 FGF22Q9HCT0 170 aa4.28□□□□□ -1.72
CD46-213ENST00000471987 TRPC7Q9HCX4 862 aa4.28□□□□□ -1.72
CD46-213ENST00000471987 ZDHHC18Q9NUE0 388 aa4.28□□□□□ -1.72
CD46-213ENST00000471987 ABI3Q9P2A4 366 aa4.28□□□□□ -1.72
CD46-213ENST00000471987 DGKBQ9Y6T7 804 aa4.28□□□□□ -1.72
CD46-213ENST00000471987 MAU2Q9Y6X3 613 aa4.28□□□□□ -1.72
CD46-213ENST00000471987 CACNA1FO60840 1977 aa4.27□□□□□ -1.73
CD46-213ENST00000471987 DUXAA6NLW8 204 aa4.27□□□□□ -1.73
CD46-213ENST00000471987 SH2B2O14492 632 aaPredicted RBP4.27□□□□□ -1.73
CD46-213ENST00000471987 ARHGEF9O43307 516 aa4.27□□□□□ -1.73
CD46-213ENST00000471987 CRLF1O75462 422 aa4.27□□□□□ -1.73
CD46-213ENST00000471987 ZNF821O75541 412 aaPredicted RBP4.27□□□□□ -1.73
CD46-213ENST00000471987 JRKO75564 520 aa4.27□□□□□ -1.73
CD46-213ENST00000471987 MSH3P20585 1137 aa4.27□□□□□ -1.73
CD46-213ENST00000471987 ZNF10P21506 573 aaPredicted RBP4.27□□□□□ -1.73
CD46-213ENST00000471987 PDE1CQ14123 709 aaPredicted RBP4.27□□□□□ -1.73
CD46-213ENST00000471987 PACS1Q6VY07 963 aa4.27□□□□□ -1.73
CD46-213ENST00000471987 Q75L30 129 aa4.27□□□□□ -1.73
CD46-213ENST00000471987 OR1J2Q8NGS2 313 aa4.27□□□□□ -1.73
CD46-213ENST00000471987 PPP4R1Q8TF05 950 aa4.27□□□□□ -1.73
CD46-213ENST00000471987 ZNF473Q8WTR7 871 aaKnown RBP4.27□□□□□ -1.73
CD46-213ENST00000471987 HTRA1Q92743 480 aa4.27□□□□□ -1.73
CD46-213ENST00000471987 ZNF653Q96CK0 615 aa4.27□□□□□ -1.73
CD46-213ENST00000471987 SENP5Q96HI0 755 aaPredicted RBP4.27□□□□□ -1.73
CD46-213ENST00000471987 NR1H4Q96RI1 486 aaPredicted RBP4.27□□□□□ -1.73
CD46-213ENST00000471987 ATOH8Q96SQ7 321 aa4.27□□□□□ -1.73
CD46-213ENST00000471987 UBXN6Q9BZV1 441 aa4.27□□□□□ -1.73
CD46-213ENST00000471987 PDZD7Q9H5P4 517 aa4.27□□□□□ -1.73
CD46-213ENST00000471987 MAGIXQ9H6Y5 334 aa4.27□□□□□ -1.73
CD46-213ENST00000471987 KLHL9Q9P2J3 617 aa4.27□□□□□ -1.73
CD46-213ENST00000471987 CYP46A1Q9Y6A2 500 aa4.27□□□□□ -1.73
CD46-213ENST00000471987 CAPN7Q9Y6W3 813 aa4.27□□□□□ -1.73
CD46-213ENST00000471987 TP53BP1Q12888 1972 aaPredicted RBP4.27□□□□□ -1.73
CD46-213ENST00000471987 A0A1W2PRG0 241 aa4.26□□□□□ -1.73
CD46-213ENST00000471987 NDUFAF8A1L188 74 aa4.26□□□□□ -1.73
CD46-213ENST00000471987 A6NL46 340 aa4.26□□□□□ -1.73
CD46-213ENST00000471987 EIF4E1BA6NMX2 242 aaKnown RBP4.26□□□□□ -1.73
CD46-213ENST00000471987 KRTAP16-1A8MUX0 517 aa4.26□□□□□ -1.73
CD46-213ENST00000471987 TCERG1O14776 1098 aaKnown RBP4.26□□□□□ -1.73
CD46-213ENST00000471987 NKX2-2O95096 273 aa4.26□□□□□ -1.73
CD46-213ENST00000471987 TFAP2AP05549 437 aa4.26□□□□□ -1.73
CD46-213ENST00000471987 IGHV4-38-2P0DP08 117 aa4.26□□□□□ -1.73
CD46-213ENST00000471987 GNAZP19086 355 aa4.26□□□□□ -1.73
CD46-213ENST00000471987 MAP2K2P36507 400 aa4.26□□□□□ -1.73
CD46-213ENST00000471987 NOVP48745 357 aa4.26□□□□□ -1.73
CD46-213ENST00000471987 SPOCK1Q08629 439 aa4.26□□□□□ -1.73
CD46-213ENST00000471987 KIAA1644Q3SXP7 199 aa4.26□□□□□ -1.73
CD46-213ENST00000471987 CDONQ4KMG0 1287 aa4.26□□□□□ -1.73
CD46-213ENST00000471987 FAAP20Q6NZ36 180 aa4.26□□□□□ -1.73
CD46-213ENST00000471987 CDC73Q6P1J9 531 aa4.26□□□□□ -1.73
CD46-213ENST00000471987 ATG9AQ7Z3C6 839 aa4.26□□□□□ -1.73
CD46-213ENST00000471987 DDHD1Q8NEL9 900 aa4.26□□□□□ -1.73
CD46-213ENST00000471987 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
CD46-213ENST00000471987 GGA3Q9NZ52 723 aa4.26□□□□□ -1.73
CD46-213ENST00000471987 MKLN1Q9UL63 735 aa4.26□□□□□ -1.73
CD46-213ENST00000471987 PRAG1Q86YV5 1406 aa4.26□□□□□ -1.73
CD46-213ENST00000471987 C1orf226A1L170 272 aa4.25□□□□□ -1.73
CD46-213ENST00000471987 PLA2G4BP0C869 781 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms