RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 TRMT1LQ7Z2T5 733 aaKnown RBP5.44□□□□□ -1.54
CCDC39-202ENST00000471307 TMPRSS12Q86WS5 348 aa5.44□□□□□ -1.54
CCDC39-202ENST00000471307 DHX40Q8IX18 779 aaKnown RBP5.44□□□□□ -1.54
CCDC39-202ENST00000471307 HUS1BQ8NHY5 278 aa5.44□□□□□ -1.54
CCDC39-202ENST00000471307 MAELQ96JY0 434 aaKnown RBP5.44□□□□□ -1.54
CCDC39-202ENST00000471307 FAM110AQ9BQ89 295 aa5.44□□□□□ -1.54
CCDC39-202ENST00000471307 MIS18AQ9NYP9 233 aa5.44□□□□□ -1.54
CCDC39-202ENST00000471307 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.44□□□□□ -1.54
CCDC39-202ENST00000471307 POU2F3Q9UKI9 436 aa5.44□□□□□ -1.54
CCDC39-202ENST00000471307 AMDHD2Q9Y303 409 aa5.44□□□□□ -1.54
CCDC39-202ENST00000471307 WNK3Q9BYP7 1800 aa5.44□□□□□ -1.54
CCDC39-202ENST00000471307 KDM6AO15550 1401 aaPredicted RBP5.43□□□□□ -1.54
CCDC39-202ENST00000471307 TNS2Q63HR2 1409 aa5.43□□□□□ -1.54
CCDC39-202ENST00000471307 TEX13CA0A0J9YWL9 993 aa5.43□□□□□ -1.54
CCDC39-202ENST00000471307 CCDC196A0A1B0GTZ2 297 aa5.43□□□□□ -1.54
CCDC39-202ENST00000471307 P2RY10O00398 339 aa5.43□□□□□ -1.54
CCDC39-202ENST00000471307 TSPAN4O14817 238 aa5.43□□□□□ -1.54
CCDC39-202ENST00000471307 FGF17O60258 216 aa5.43□□□□□ -1.54
CCDC39-202ENST00000471307 HOXB7P09629 217 aa5.43□□□□□ -1.54
CCDC39-202ENST00000471307 EIF2S3P41091 472 aaKnown RBP5.43□□□□□ -1.54
CCDC39-202ENST00000471307 FUT6P51993 359 aa5.43□□□□□ -1.54
CCDC39-202ENST00000471307 RARSP54136 660 aaKnown RBP5.43□□□□□ -1.54
CCDC39-202ENST00000471307 TRPC3Q13507 836 aa5.43□□□□□ -1.54
CCDC39-202ENST00000471307 TDGQ13569 410 aa5.43□□□□□ -1.54
CCDC39-202ENST00000471307 GPR68Q15743 365 aa5.43□□□□□ -1.54
CCDC39-202ENST00000471307 TWISTNBQ3B726 338 aaPredicted RBP5.43□□□□□ -1.54
CCDC39-202ENST00000471307 ALDH1L2Q3SY69 923 aa5.43□□□□□ -1.54
CCDC39-202ENST00000471307 ZNF790Q6PG37 636 aa5.43□□□□□ -1.54
CCDC39-202ENST00000471307 LCTLQ6UWM7 567 aa5.43□□□□□ -1.54
CCDC39-202ENST00000471307 SLC36A4Q6YBV0 504 aa5.43□□□□□ -1.54
CCDC39-202ENST00000471307 RND1Q92730 232 aa5.43□□□□□ -1.54
CCDC39-202ENST00000471307 USP13Q92995 863 aaPredicted RBP5.43□□□□□ -1.54
CCDC39-202ENST00000471307 CDCA5Q96FF9 252 aa5.43□□□□□ -1.54
CCDC39-202ENST00000471307 NAP1L4Q99733 375 aaKnown RBP5.43□□□□□ -1.54
CCDC39-202ENST00000471307 PLEKHA5Q9HAU0 1116 aa5.43□□□□□ -1.54
CCDC39-202ENST00000471307 TMEM30AQ9NV96 361 aa5.43□□□□□ -1.54
CCDC39-202ENST00000471307 TMOD3Q9NYL9 352 aa5.43□□□□□ -1.54
CCDC39-202ENST00000471307 A4GNTQ9UNA3 340 aa5.43□□□□□ -1.54
CCDC39-202ENST00000471307 ERVK-11Q9UQG0 969 aa5.43□□□□□ -1.54
CCDC39-202ENST00000471307 UTYO14607 1347 aa5.43□□□□□ -1.54
CCDC39-202ENST00000471307 RNF123Q5XPI4 1314 aa5.43□□□□□ -1.54
CCDC39-202ENST00000471307 SHANK3Q9BYB0 1731 aa5.43□□□□□ -1.54
CCDC39-202ENST00000471307 LRRC37A3O60309 1634 aa5.42□□□□□ -1.54
CCDC39-202ENST00000471307 ASPDHA6ND91 283 aa5.42□□□□□ -1.54
CCDC39-202ENST00000471307 ATP1A1P05023 1023 aaKnown RBP5.42□□□□□ -1.54
CCDC39-202ENST00000471307 S1PR1P21453 382 aa5.42□□□□□ -1.54
CCDC39-202ENST00000471307 HNRNPH2P55795 449 aaKnown RBP5.42□□□□□ -1.54
CCDC39-202ENST00000471307 PITX1P78337 314 aaPredicted RBP5.42□□□□□ -1.54
CCDC39-202ENST00000471307 RELQ04864 619 aaPredicted RBP5.42□□□□□ -1.54
CCDC39-202ENST00000471307 SLC20A2Q08357 652 aa5.42□□□□□ -1.54
CCDC39-202ENST00000471307 BAK1Q16611 211 aa5.42□□□□□ -1.54
CCDC39-202ENST00000471307 GGNBP1Q5YKI7 109 aa5.42□□□□□ -1.54
CCDC39-202ENST00000471307 TTC5Q8N0Z6 440 aa5.42□□□□□ -1.54
CCDC39-202ENST00000471307 METTL27Q8N6F8 245 aaPredicted RBP5.42□□□□□ -1.54
CCDC39-202ENST00000471307 TSPYL6Q8N831 410 aa5.42□□□□□ -1.54
CCDC39-202ENST00000471307 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.42□□□□□ -1.54
CCDC39-202ENST00000471307 PIGBQ92521 554 aa5.42□□□□□ -1.54
CCDC39-202ENST00000471307 ZBTB10Q96DT7 871 aa5.42□□□□□ -1.54
CCDC39-202ENST00000471307 APOPT1Q96IL0 206 aa5.42□□□□□ -1.54
CCDC39-202ENST00000471307 SLC41A2Q96JW4 573 aa5.42□□□□□ -1.54
CCDC39-202ENST00000471307 HEMGNQ9BXL5 484 aa5.42□□□□□ -1.54
CCDC39-202ENST00000471307 ZFP57Q9NU63 452 aa5.42□□□□□ -1.54
CCDC39-202ENST00000471307 ABCF3Q9NUQ8 709 aa5.42□□□□□ -1.54
CCDC39-202ENST00000471307 KCNS2Q9ULS6 477 aa5.42□□□□□ -1.54
CCDC39-202ENST00000471307 TTC7AQ9ULT0 858 aaPredicted RBP5.42□□□□□ -1.54
CCDC39-202ENST00000471307 PSAT1Q9Y617 370 aa5.42□□□□□ -1.54
CCDC39-202ENST00000471307 SCINQ9Y6U3 715 aa5.42□□□□□ -1.54
CCDC39-202ENST00000471307 MRC1P22897 1456 aa5.42□□□□□ -1.54
CCDC39-202ENST00000471307 CACNA1FO60840 1977 aa5.42□□□□□ -1.54
CCDC39-202ENST00000471307 SIPA1L3O60292 1781 aaPredicted RBP5.42□□□□□ -1.54
CCDC39-202ENST00000471307 GLI3P10071 1580 aa5.42□□□□□ -1.54
CCDC39-202ENST00000471307 HEG1Q9ULI3 1381 aa5.42□□□□□ -1.54
CCDC39-202ENST00000471307 BCL9O00512 1426 aa5.41□□□□□ -1.54
CCDC39-202ENST00000471307 THSD7AQ9UPZ6 1657 aa5.41□□□□□ -1.54
CCDC39-202ENST00000471307 FAM72CH0Y354 149 aa5.41□□□□□ -1.54
CCDC39-202ENST00000471307 C16orf97H3BN30 126 aa5.41□□□□□ -1.54
CCDC39-202ENST00000471307 TNPO2O14787 897 aaKnown RBP5.41□□□□□ -1.54
CCDC39-202ENST00000471307 IPO8O15397 1037 aaKnown RBP5.41□□□□□ -1.54
CCDC39-202ENST00000471307 CYC1P08574 325 aa5.41□□□□□ -1.54
CCDC39-202ENST00000471307 G6PDP11413 515 aa5.41□□□□□ -1.54
CCDC39-202ENST00000471307 CDH1P12830 882 aa5.41□□□□□ -1.54
CCDC39-202ENST00000471307 HLA-DOBP13765 273 aa5.41□□□□□ -1.54
CCDC39-202ENST00000471307 CD53P19397 219 aa5.41□□□□□ -1.54
CCDC39-202ENST00000471307 GLIPR1P48060 266 aa5.41□□□□□ -1.54
CCDC39-202ENST00000471307 RPP30P78346 268 aaKnown RBP5.41□□□□□ -1.54
CCDC39-202ENST00000471307 SLC39A6Q13433 755 aa5.41□□□□□ -1.54
CCDC39-202ENST00000471307 MRGPRG-AS1Q2M3A8 158 aa5.41□□□□□ -1.54
CCDC39-202ENST00000471307 FAM72AQ5TYM5 149 aa5.41□□□□□ -1.54
CCDC39-202ENST00000471307 CCDC30Q5VVM6 783 aa5.41□□□□□ -1.54
CCDC39-202ENST00000471307 FAM72DQ6L9T8 149 aa5.41□□□□□ -1.54
CCDC39-202ENST00000471307 RGMBQ6NW40 437 aa5.41□□□□□ -1.54
CCDC39-202ENST00000471307 FBXO46Q6PJ61 603 aaPredicted RBP5.41□□□□□ -1.54
CCDC39-202ENST00000471307 TMED8Q6PL24 325 aaPredicted RBP5.41□□□□□ -1.54
CCDC39-202ENST00000471307 GFRALQ6UXV0 394 aa5.41□□□□□ -1.54
CCDC39-202ENST00000471307 NFE4Q86UQ8 179 aa5.41□□□□□ -1.54
CCDC39-202ENST00000471307 FAM72BQ86X60 149 aa5.41□□□□□ -1.54
CCDC39-202ENST00000471307 KMT5CQ86Y97 462 aa5.41□□□□□ -1.54
CCDC39-202ENST00000471307 TDRPQ86YL5 185 aa5.41□□□□□ -1.54
CCDC39-202ENST00000471307 RNF113BQ8IZP6 322 aaKnown RBP5.41□□□□□ -1.54
CCDC39-202ENST00000471307 SPATA6LQ8N4H0 392 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms