RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 PTGIRP43119 386 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 GLRBP48167 497 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 PEX5P50542 639 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 SNRPD1P62314 119 aaKnown RBP5.81□□□□□ -1.48
VARS-222ENST00000470953 RPL7AP62424 266 aaKnown RBP5.81□□□□□ -1.48
VARS-222ENST00000470953 RAD51Q06609 339 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 PTP4A2Q12974 167 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 MAMLD1Q13495 774 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 EIF4EBP2Q13542 120 aaPredicted RBP5.81□□□□□ -1.48
VARS-222ENST00000470953 DNASE1L3Q13609 305 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 LAMB3Q13751 1172 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 DSG2Q14126 1118 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 KRT81Q14533 505 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 ZNF235Q14590 738 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 CLPPQ16740 277 aaPredicted RBP5.81□□□□□ -1.48
VARS-222ENST00000470953 UGT8Q16880 541 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 ODF2Q5BJF6 829 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 FIGNQ5HY92 759 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 FAM69BQ5VUD6 431 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 PLEKHA7Q6IQ23 1121 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 TMEM71Q6P5X7 295 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 FAM199XQ6PEV8 388 aaPredicted RBP5.81□□□□□ -1.48
VARS-222ENST00000470953 PODNL1Q6PEZ8 512 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 RPTNQ6XPR3 784 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 LYSMD3Q7Z3D4 306 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 ZNF571Q7Z3V5 609 aaPredicted RBP5.81□□□□□ -1.48
VARS-222ENST00000470953 PCDH20Q8N6Y1 951 aaKnown RBP5.81□□□□□ -1.48
VARS-222ENST00000470953 RTL3Q8N8U3 475 aaKnown RBP5.81□□□□□ -1.48
VARS-222ENST00000470953 ZDHHC1Q8WTX9 485 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 PTCD2Q8WV60 388 aaKnown RBP5.81□□□□□ -1.48
VARS-222ENST00000470953 SCARF2Q96GP6 870 aaPredicted RBP5.81□□□□□ -1.48
VARS-222ENST00000470953 ELMO2Q96JJ3 720 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 GDAP1L1Q96MZ0 367 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 TREX2Q9BQ50 279 aaPredicted RBP5.81□□□□□ -1.48
VARS-222ENST00000470953 HEPHQ9BQS7 1158 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 XPO4Q9C0E2 1151 aaKnown RBP5.81□□□□□ -1.48
VARS-222ENST00000470953 CEP44Q9C0F1 390 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 MAGEH1Q9H213 219 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 ZWILCHQ9H900 591 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 SP110Q9HB58 689 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 AGPAT4Q9NRZ5 378 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 TMEM248Q9NWD8 314 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 SIDT1Q9NXL6 827 aaKnown RBP5.81□□□□□ -1.48
VARS-222ENST00000470953 AIPL1Q9NZN9 384 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 PCSK1NQ9UHG2 260 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 ANAPC7Q9UJX3 599 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 B3GNT3Q9Y2A9 372 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 FCF1Q9Y324 198 aaKnown RBP5.81□□□□□ -1.48
VARS-222ENST00000470953 DGKBQ9Y6T7 804 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 ANKRD36A6QL64 1941 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 PIKFYVEQ9Y2I7 2098 aa5.81□□□□□ -1.48
VARS-222ENST00000470953 ARHGAP42A6NI28 874 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 DRGXA6NNA5 263 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 TMEM110-MUSTN1A8MSY1 372 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 EIF3CLB5ME19 914 aaKnown RBP5.8□□□□□ -1.48
VARS-222ENST00000470953 I6L893 689 aaPredicted RBP5.8□□□□□ -1.48
VARS-222ENST00000470953 DFFAO00273 331 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 DDX3XO00571 662 aaKnown RBP eCLIP5.8□□□□□ -1.48
VARS-222ENST00000470953 TOR1BO14657 336 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 PROM1O43490 865 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 TIAF1O95411 115 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 RECKO95980 971 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 GYPCP04921 128 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 GZMAP12544 262 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 AK4P27144 223 aaPredicted RBP5.8□□□□□ -1.48
VARS-222ENST00000470953 HTR7P34969 479 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 CA5AP35218 305 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 ACVRL1P37023 503 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 PBX1P40424 430 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 CCNHP51946 323 aaPredicted RBP5.8□□□□□ -1.48
VARS-222ENST00000470953 RHOAP61586 193 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 SH3BP2P78314 561 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 ADORA2A-AS1P86434 159 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 NRG1Q02297 640 aaPredicted RBP5.8□□□□□ -1.48
VARS-222ENST00000470953 SLC20A2Q08357 652 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 NR1I3Q14994 352 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 LRRC14Q15048 493 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 PARP15Q460N3 678 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 C5orf22Q49AR2 442 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 RAB6CQ53S08 254 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 CCDC122Q5T0U0 273 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 MANEALQ5VSG8 457 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 E4F1Q66K89 784 aaPredicted RBP5.8□□□□□ -1.48
VARS-222ENST00000470953 LEKR1Q6ZMV7 388 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 IRF2BP2Q7Z5L9 587 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 CUZD1Q86UP6 607 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 HPS6Q86YV9 775 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 KRTAP1-3Q8IUG1 177 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 ZNF683Q8IZ20 524 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 CNPY4Q8N129 248 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 PYROXD2Q8N2H3 581 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 PELI3Q8N2H9 469 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 OR56A4Q8NGH8 313 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 NSMCE1Q8WV22 266 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 CTNNBL1Q8WYA6 563 aaPredicted RBP5.8□□□□□ -1.48
VARS-222ENST00000470953 HSPH1Q92598 858 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 SYN2Q92777 582 aaPredicted RBP5.8□□□□□ -1.48
VARS-222ENST00000470953 TRIM44Q96DX7 344 aaPredicted RBP5.8□□□□□ -1.48
VARS-222ENST00000470953 COX4I2Q96KJ9 171 aa5.8□□□□□ -1.48
VARS-222ENST00000470953 WDR92Q96MX6 357 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms