RNA–Protein interactions for RNA: ENST00000470357.1

VAMP3-202, Transcript of vesicle associated membrane protein 3, humanhuman

TSL 3 BASIC

Gene VAMP3, Length 954 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-202ENST00000470357 TMEM196Q5HYL7 178 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 AARS2Q5JTZ9 985 aaKnown RBP6.62□□□□□ -1.35
VAMP3-202ENST00000470357 MRNIPQ6NTE8 343 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 ERAP2Q6P179 960 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 BEND4Q6ZU67 534 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 TPRG1Q6ZUI0 275 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 GALNT7Q86SF2 657 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 KCNMB4Q86W47 210 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 RASSF3Q86WH2 238 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 CAMK1DQ8IU85 385 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 CTAGE3PQ8IX95 158 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 CHPFQ8IZ52 775 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 ARFGAP2Q8N6H7 521 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 ZNF513Q8N8E2 541 aaPredicted RBP6.62□□□□□ -1.35
VAMP3-202ENST00000470357 ST13P5Q8NFI4 369 aaPredicted RBP6.62□□□□□ -1.35
VAMP3-202ENST00000470357 UHMK1Q8TAS1 419 aaKnown RBP6.62□□□□□ -1.35
VAMP3-202ENST00000470357 PIH1D2Q8WWB5 315 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 SLC44A1Q8WWI5 657 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 SORCS1Q8WY21 1168 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 PTPRN2Q92932 1015 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.62□□□□□ -1.35
VAMP3-202ENST00000470357 RAB7BQ96AH8 199 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 SCRN2Q96FV2 425 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 SGSM3Q96HU1 749 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 SHDQ96IW2 340 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 ATP6V1G3Q96LB4 118 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 MCCC1Q96RQ3 725 aaPredicted RBP6.62□□□□□ -1.35
VAMP3-202ENST00000470357 PAFAH2Q99487 392 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 TTC1Q99614 292 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 CPNE1Q99829 537 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 WDR83Q9BRX9 315 aaKnown RBP6.62□□□□□ -1.35
VAMP3-202ENST00000470357 RTKNQ9BST9 563 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 GPR63Q9BZJ6 419 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 CDH19Q9H159 772 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 CENPHQ9H3R5 247 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 TMBIM4Q9HC24 238 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 CHRAC1Q9NRG0 131 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 TREX1Q9NSU2 369 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 C20orf96Q9NUD7 363 aaPredicted RBP6.62□□□□□ -1.35
VAMP3-202ENST00000470357 NLE1Q9NVX2 485 aaPredicted RBP6.62□□□□□ -1.35
VAMP3-202ENST00000470357 PIH1D1Q9NWS0 290 aaKnown RBP6.62□□□□□ -1.35
VAMP3-202ENST00000470357 KCTD5Q9NXV2 234 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 OGFRQ9NZT2 677 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 FBXO4Q9UKT5 387 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 MRPS17Q9Y2R5 130 aaKnown RBP6.62□□□□□ -1.35
VAMP3-202ENST00000470357 ZNF711Q9Y462 761 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 PCDHGA2Q9Y5H1 932 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 ACTL7BQ9Y614 415 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 PIAS3Q9Y6X2 628 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 PKD1L2Q7Z442 2459 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 ATG2BQ96BY7 2078 aa6.62□□□□□ -1.35
VAMP3-202ENST00000470357 KANSL1LA0AUZ9 987 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 RGSL1A5PLK6 1076 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 SHISA7A6NL88 538 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 A6NNZ2 444 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 UPK3BL1B0FP48 263 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 UPK3BL2E5RIL1 263 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 H7C0S8 307 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 AGPSO00116 658 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 KPNA3O00505 521 aaPredicted RBP6.61□□□□□ -1.35
VAMP3-202ENST00000470357 FBXO24O75426 580 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 LEFTY1O75610 366 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 RPP40O75818 363 aaKnown RBP6.61□□□□□ -1.35
VAMP3-202ENST00000470357 VAPBO95292 243 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 PIGNO95427 931 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 UGT2B4P06133 528 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 EPHX1P07099 455 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 PDHA1P08559 390 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 SNRPAP09012 282 aaKnown RBP6.61□□□□□ -1.35
VAMP3-202ENST00000470357 KRT15P19012 456 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 OGNP20774 298 aaKnown RBP6.61□□□□□ -1.35
VAMP3-202ENST00000470357 NMBRP28336 390 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 NTSR1P30989 418 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 VIPR1P32241 457 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 SPRP35270 261 aaPredicted RBP6.61□□□□□ -1.35
VAMP3-202ENST00000470357 GP5P40197 560 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 KIR2DL1P43626 348 aaPredicted RBP6.61□□□□□ -1.35
VAMP3-202ENST00000470357 POLD2P49005 469 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 ZNF140P52738 457 aaPredicted RBP6.61□□□□□ -1.35
VAMP3-202ENST00000470357 PRKCQQ04759 706 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 ELP6Q0PNE2 266 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 MSLNQ13421 630 aaPredicted RBP6.61□□□□□ -1.35
VAMP3-202ENST00000470357 OLIG2Q13516 323 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 CAMK2GQ13555 558 aaPredicted RBP6.61□□□□□ -1.35
VAMP3-202ENST00000470357 ARHGEF7Q14155 803 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 IHHQ14623 411 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 CNGA3Q16281 694 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 TUBB8Q3ZCM7 444 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 EOGTQ5NDL2 527 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 FAM182AQ5T1J6 154 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 C9orf64Q5T6V5 341 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 RNF187Q5TA31 235 aaPredicted RBP6.61□□□□□ -1.35
VAMP3-202ENST00000470357 GRTP1Q5TC63 336 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 EGFLAMQ63HQ2 1017 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 NEPROQ6NW34 567 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 AFTPHQ6ULP2 937 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 CCDC91Q7Z6B0 441 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 SDCCAG8Q86SQ7 713 aaPredicted RBP6.61□□□□□ -1.35
VAMP3-202ENST00000470357 CNTN4Q8IWV2 1026 aa6.61□□□□□ -1.35
VAMP3-202ENST00000470357 CBARPQ8N350 705 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms