RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 ATP1A1P05023 1023 aaKnown RBP11.8□□□□□ -0.52
LSM2-209ENST00000470083 STSP08842 583 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 HTR7P34969 479 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 GLRBP48167 497 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 CLCNKAP51800 687 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 GPS2Q13227 327 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 ATP1A4Q13733 1029 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 ZNF235Q14590 738 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 KCNAB1Q14722 419 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 PTPRRQ15256 657 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 KYNUQ16719 465 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 MIIPQ5JXC2 388 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 IRGCQ6NXR0 463 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 Q6ZS92 163 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 CUZD1Q86UP6 607 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 KCNMB4Q86W47 210 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 TRIM48Q8IWZ4 208 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 ZBTB2Q8N680 514 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 AOPEPQ8N6M6 819 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 ENDOVQ8N8Q3 282 aaKnown RBP11.8□□□□□ -0.52
LSM2-209ENST00000470083 TM9SF4Q92544 642 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 UBXN4Q92575 508 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 SGSM3Q96HU1 749 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 ZNF514Q96K75 400 aaPredicted RBP11.8□□□□□ -0.52
LSM2-209ENST00000470083 LRFN5Q96NI6 719 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 NLNQ9BYT8 704 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 TRIM8Q9BZR9 551 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 RAB33BQ9H082 229 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 CHST11Q9NPF2 352 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 FGF21Q9NSA1 209 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 SCHIP1Q9P0W5 487 aaPredicted RBP11.8□□□□□ -0.52
LSM2-209ENST00000470083 KIAA1468Q9P260 1216 aa11.8□□□□□ -0.52
LSM2-209ENST00000470083 IGHV5-51A0A0C4DH38 117 aa11.79□□□□□ -0.52
LSM2-209ENST00000470083 A0A0U1RQS6 177 aa11.79□□□□□ -0.52
LSM2-209ENST00000470083 TTC24A2A3L6 582 aaPredicted RBP11.79□□□□□ -0.52
LSM2-209ENST00000470083 SCRG1O75711 98 aa11.79□□□□□ -0.52
LSM2-209ENST00000470083 JCHAINP01591 159 aa11.79□□□□□ -0.52
LSM2-209ENST00000470083 KLK3P07288 261 aaPredicted RBP11.79□□□□□ -0.52
LSM2-209ENST00000470083 EDN3P14138 238 aa11.79□□□□□ -0.52
LSM2-209ENST00000470083 COX6B1P14854 86 aa11.79□□□□□ -0.52
LSM2-209ENST00000470083 MMP8P22894 467 aa11.79□□□□□ -0.52
LSM2-209ENST00000470083 RFC1P35251 1148 aaPredicted RBP11.79□□□□□ -0.52
LSM2-209ENST00000470083 SLC19A1P41440 591 aa11.79□□□□□ -0.52
LSM2-209ENST00000470083 AIF1P55008 147 aa11.79□□□□□ -0.52
LSM2-209ENST00000470083 STX17P56962 302 aa11.79□□□□□ -0.52
LSM2-209ENST00000470083 GSDMDP57764 484 aa11.79□□□□□ -0.52
LSM2-209ENST00000470083 TPI1P60174 286 aa11.79□□□□□ -0.52
LSM2-209ENST00000470083 IL10RBQ08334 325 aa11.79□□□□□ -0.52
LSM2-209ENST00000470083 TRAF2Q12933 501 aa11.79□□□□□ -0.52
LSM2-209ENST00000470083 MYBPC3Q14896 1274 aa11.79□□□□□ -0.52
LSM2-209ENST00000470083 FAM69BQ5VUD6 431 aa11.79□□□□□ -0.52
LSM2-209ENST00000470083 LRRC66Q68CR7 880 aa11.79□□□□□ -0.52
LSM2-209ENST00000470083 ISM2Q6H9L7 571 aa11.79□□□□□ -0.52
LSM2-209ENST00000470083 NOP9Q86U38 636 aaKnown RBP11.79□□□□□ -0.52
LSM2-209ENST00000470083 FJX1Q86VR8 437 aa11.79□□□□□ -0.52
LSM2-209ENST00000470083 RIOK2Q9BVS4 552 aaKnown RBP11.79□□□□□ -0.52
LSM2-209ENST00000470083 POT1Q9NUX5 634 aa11.79□□□□□ -0.52
LSM2-209ENST00000470083 ZNF624Q9P2J8 865 aaPredicted RBP11.79□□□□□ -0.52
LSM2-209ENST00000470083 MAN1B1Q9UKM7 699 aa11.79□□□□□ -0.52
LSM2-209ENST00000470083 CNOT6Q9ULM6 557 aaKnown RBP11.79□□□□□ -0.52
LSM2-209ENST00000470083 FZD10Q9ULW2 581 aa11.79□□□□□ -0.52
LSM2-209ENST00000470083 PPIL1Q9Y3C6 166 aa11.79□□□□□ -0.52
LSM2-209ENST00000470083 KLHL41O60662 606 aa11.78□□□□□ -0.52
LSM2-209ENST00000470083 IPO13O94829 963 aaKnown RBP11.78□□□□□ -0.52
LSM2-209ENST00000470083 PGLSO95336 258 aa11.78□□□□□ -0.52
LSM2-209ENST00000470083 FGFR1OPO95684 399 aaKnown RBP11.78□□□□□ -0.52
LSM2-209ENST00000470083 MMEP08473 750 aa11.78□□□□□ -0.52
LSM2-209ENST00000470083 EBLN1P0CF75 366 aa11.78□□□□□ -0.52
LSM2-209ENST00000470083 KRT3P12035 628 aa11.78□□□□□ -0.52
LSM2-209ENST00000470083 ZNF30P17039 623 aa11.78□□□□□ -0.52
LSM2-209ENST00000470083 HOXB4P17483 251 aaPredicted RBP11.78□□□□□ -0.52
LSM2-209ENST00000470083 HSPA9P38646 679 aaKnown RBP11.78□□□□□ -0.52
LSM2-209ENST00000470083 TUBB4BP68371 445 aa11.78□□□□□ -0.52
LSM2-209ENST00000470083 PTSQ03393 145 aa11.78□□□□□ -0.52
LSM2-209ENST00000470083 TUBB2AQ13885 445 aa11.78□□□□□ -0.52
LSM2-209ENST00000470083 LBRQ14739 615 aaKnown RBP11.78□□□□□ -0.52
LSM2-209ENST00000470083 LLGL1Q15334 1064 aa11.78□□□□□ -0.52
LSM2-209ENST00000470083 SCYL2Q6P3W7 929 aa11.78□□□□□ -0.52
LSM2-209ENST00000470083 ARHGAP36Q6ZRI8 547 aa11.78□□□□□ -0.52
LSM2-209ENST00000470083 KMT5CQ86Y97 462 aa11.78□□□□□ -0.52
LSM2-209ENST00000470083 TMEM126BQ8IUX1 230 aa11.78□□□□□ -0.52
LSM2-209ENST00000470083 ARHGAP12Q8IWW6 846 aa11.78□□□□□ -0.52
LSM2-209ENST00000470083 RBM12BQ8IXT5 1001 aaKnown RBP11.78□□□□□ -0.52
LSM2-209ENST00000470083 NXPE1Q8N323 547 aa11.78□□□□□ -0.52
LSM2-209ENST00000470083 ZADH2Q8N4Q0 377 aa11.78□□□□□ -0.52
LSM2-209ENST00000470083 SLC38A9Q8NBW4 561 aa11.78□□□□□ -0.52
LSM2-209ENST00000470083 ITLN2Q8WWU7 325 aaPredicted RBP11.78□□□□□ -0.52
LSM2-209ENST00000470083 NUDCD1Q96RS6 583 aa11.78□□□□□ -0.52
LSM2-209ENST00000470083 MLPHQ9BV36 600 aaPredicted RBP11.78□□□□□ -0.52
LSM2-209ENST00000470083 TUBB2BQ9BVA1 445 aa11.78□□□□□ -0.52
LSM2-209ENST00000470083 OSGEPL1Q9H4B0 414 aa11.78□□□□□ -0.52
LSM2-209ENST00000470083 NOD2Q9HC29 1040 aa11.78□□□□□ -0.52
LSM2-209ENST00000470083 HOOK1Q9UJC3 728 aaKnown RBP11.78□□□□□ -0.52
LSM2-209ENST00000470083 PCSK5Q92824 1860 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 MEN1O00255 615 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 DFFAO00273 331 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 GRID2O43424 1007 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 NUAK1O60285 661 aa11.77□□□□□ -0.53
LSM2-209ENST00000470083 HSP90AA1P07900 732 aaKnown RBP11.77□□□□□ -0.53
LSM2-209ENST00000470083 SNRPB2P08579 225 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms