RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 ERVW-1Q9UQF0 538 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 PAPPAQ13219 1627 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 DHRS12A0PJE2 317 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 OR51F1A6NGY5 319 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 OR2AG2A6NM03 316 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 SNAP91O60641 907 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 PRAMEF11O60813 436 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 SMNDC1O75940 238 aaKnown RBP eCLIP13.69□□□□□ -0.22
BRAT1-203ENST00000467558 AHSGP02765 367 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 PCSK2P16519 638 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 IDH3AP50213 366 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 CBX2Q14781 532 aaPredicted RBP13.69□□□□□ -0.22
BRAT1-203ENST00000467558 UBXN11Q5T124 520 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 DSELQ8IZU8 1212 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 OR2AP1Q8NGE2 309 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 ZNF317Q96PQ6 595 aaPredicted RBP13.69□□□□□ -0.22
BRAT1-203ENST00000467558 GPR22Q99680 433 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 KIFC1Q9BW19 673 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 ACAT2Q9BWD1 397 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 EPS8L2Q9H6S3 715 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 TBC1D23Q9NUY8 699 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 OXSMQ9NWU1 459 aa13.69□□□□□ -0.22
BRAT1-203ENST00000467558 ANKRD66B4E2M5 251 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 FAM72CH0Y354 149 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 PITPNM1O00562 1244 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 PPIBP23284 216 aaKnown RBP13.68□□□□□ -0.22
BRAT1-203ENST00000467558 KRT20P35900 424 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 MARCH8Q5T0T0 291 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 FAM72AQ5TYM5 149 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 FAM72DQ6L9T8 149 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 FAM72BQ86X60 149 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 NRAPQ86VF7 1730 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 ISM1B1AKI9 464 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 E7ESA3 106 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 KLF11O14901 512 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 CNOT3O75175 753 aaKnown RBP13.68□□□□□ -0.22
BRAT1-203ENST00000467558 FGF18O76093 207 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 OAZ2O95190 189 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 EDN1P05305 212 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 PSMD8P48556 350 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 ZNF252P-AS1Q0IIN9 211 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 NAE1Q13564 534 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 RALGPS1Q5JS13 557 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 ANXA8L1Q5VT79 327 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 BHLHB9Q6PI77 547 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 TMC5Q6UXY8 1006 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 TIFABQ6ZNK6 161 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 C11orf74Q86VG3 221 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 PGAM4Q8N0Y7 254 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 SIDT2Q8NBJ9 832 aaKnown RBP13.68□□□□□ -0.22
BRAT1-203ENST00000467558 TSSK3Q96PN8 268 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 MYOCQ99972 504 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 ADAM7Q9H2U9 754 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 FLRT1Q9NZU1 646 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 MYH4Q9Y623 1939 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 SOCS7O14512 581 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 RNASEH2AO75792 299 aaKnown RBP13.68□□□□□ -0.22
BRAT1-203ENST00000467558 TNNI3P19429 210 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 SLC16A1P53985 500 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 PRKCQQ04759 706 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 SIX1Q15475 284 aaPredicted RBP13.68□□□□□ -0.22
BRAT1-203ENST00000467558 GPRIN1Q7Z2K8 1008 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 C14orf80Q86SX3 495 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 UMODL1-AS1Q8N2C9 162 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 TERB1Q8NA31 727 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 ZFRQ96KR1 1074 aaKnown RBP13.68□□□□□ -0.22
BRAT1-203ENST00000467558 APOLD1Q96LR9 279 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 WRAP53Q9BUR4 548 aaKnown RBP13.68□□□□□ -0.22
BRAT1-203ENST00000467558 CACNA2D2Q9NY47 1150 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 CD84Q9UIB8 345 aa13.68□□□□□ -0.22
BRAT1-203ENST00000467558 KDELR3O43731 214 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 KRT75O95678 551 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 CYP11A1P05108 521 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 GJA1P17302 382 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 WASP42768 502 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 TJAP1Q5JTD0 557 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 TTC23Q5W5X9 447 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 TMCO5AQ8N6Q1 288 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 DCBLD1Q8N8Z6 715 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 DCAF4L2Q8NA75 395 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 C10orf82Q8WW14 230 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 ARNTL2Q8WYA1 636 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 FERD3LQ96RJ6 166 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 AARSD1Q9BTE6 412 aaKnown RBP13.67□□□□□ -0.22
BRAT1-203ENST00000467558 NUSAP1Q9BXS6 441 aaKnown RBP13.67□□□□□ -0.22
BRAT1-203ENST00000467558 ATG10Q9H0Y0 220 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 TDP1Q9NUW8 608 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 ZBTB42B2RXF5 422 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 DCLK1O15075 740 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 C8GP07360 202 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 DNAJB1P25685 340 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 HNF4AP41235 474 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 IRF9Q00978 393 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 GPM6BQ13491 265 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 PWP1Q13610 501 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 GTF2H2Q13888 395 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 FBXO48Q5FWF7 155 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 GTF2H2CQ6P1K8 395 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 PAQR3Q6TCH7 311 aa13.67□□□□□ -0.22
BRAT1-203ENST00000467558 CDK20Q8IZL9 346 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms