RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 SPATA13Q96N96 652 aa13.94□□□□□ -0.18
CCHCR1-211ENST00000467553 DPYSL5Q9BPU6 564 aa13.94□□□□□ -0.18
CCHCR1-211ENST00000467553 FICDQ9BVA6 458 aa13.94□□□□□ -0.18
CCHCR1-211ENST00000467553 SPATA16Q9BXB7 569 aa13.94□□□□□ -0.18
CCHCR1-211ENST00000467553 SUFUQ9UMX1 484 aa13.94□□□□□ -0.18
CCHCR1-211ENST00000467553 AAR2Q9Y312 384 aaKnown RBP13.94□□□□□ -0.18
CCHCR1-211ENST00000467553 ZNF462Q96JM2 2506 aa13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 C5orf60A6NFR6 353 aa13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 FADS2P1A8MWK0 482 aa13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 CPNE6O95741 557 aa13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 ATP1A1P05023 1023 aaKnown RBP13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 IVLP07476 585 aa13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 LIPCP11150 499 aa13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 HLA-DPA1P20036 260 aa13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 HENMT1Q5T8I9 393 aaKnown RBP13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 TMEM164Q5U3C3 297 aa13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 ARHGEF18Q6ZSZ5 1173 aa13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 ZNF438Q7Z4V0 828 aa13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 B3GNT8Q7Z7M8 397 aa13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 PIM3Q86V86 326 aa13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 TRIM58Q8NG06 486 aa13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 SLC35B2Q8TB61 432 aa13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 BLOC1S5Q8TDH9 187 aa13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 C1orf54Q8WWF1 131 aa13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 ATG4AQ8WYN0 398 aa13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 MED8Q96G25 268 aa13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 APOL2Q9BQE5 337 aa13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 TMEM121Q9BTD3 319 aa13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 RAD18Q9NS91 495 aa13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 ZNHIT2Q9UHR6 403 aa13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 CNOT6Q9ULM6 557 aaKnown RBP13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 SLC17A4Q9Y2C5 497 aa13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 LOXL2Q9Y4K0 774 aa13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 RNF215Q9Y6U7 377 aa13.93□□□□□ -0.18
CCHCR1-211ENST00000467553 AHCTF1Q8WYP5 2266 aa13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 B4DGG1 531 aa13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 HGSO14964 777 aaPredicted RBP13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 BUD23O43709 281 aaKnown RBP13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 ZNF189O75820 626 aaPredicted RBP13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 FGF1P05230 155 aa13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 PLA2G2AP14555 144 aa13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 BPIP17213 487 aa13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 AK4P27144 223 aaPredicted RBP13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 B4GALNT1Q00973 533 aa13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 SQSTM1Q13501 440 aa13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 OLIG2Q13516 323 aa13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 TRA2AQ13595 282 aaKnown RBP eCLIP13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 SNX1Q13596 522 aa13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 SPARCL1Q14515 664 aa13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 PARP6Q2NL67 630 aa13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 TAB3Q8N5C8 712 aaPredicted RBP13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 ZDHHC1Q8WTX9 485 aa13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 SCARF2Q96GP6 870 aaPredicted RBP13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 COX14Q96I36 57 aa13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 GORASP1Q9BQQ3 440 aa13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 FOXP3Q9BZS1 431 aa13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 CARD9Q9H257 536 aa13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 TRABDQ9H4I3 376 aa13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 ARFGAP3Q9NP61 516 aa13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 HACD3Q9P035 362 aa13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 ZNF148Q9UQR1 794 aa13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 PLEKHM1Q9Y4G2 1056 aa13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 PCDHB11Q9Y5F2 797 aa13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 OAS3Q9Y6K5 1087 aaKnown RBP13.92□□□□□ -0.18
CCHCR1-211ENST00000467553 RHPN2P1A8MT19 583 aa13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 SLC25A14O95258 325 aaPredicted RBP13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 ITGB2P05107 769 aa13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 SFTPCP11686 197 aa13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 ADCY8P40145 1251 aa13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 GDF10P55107 478 aa13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 CTBSQ01459 385 aa13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 ZNF648Q5T619 568 aaPredicted RBP13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 RANBP10Q6VN20 620 aa13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 GLT6D1Q7Z4J2 308 aa13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 NRROSQ86YC3 692 aa13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 JAMLQ86YT9 394 aa13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 SLITRK4Q8IW52 837 aa13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 TTC30BQ8N4P2 665 aa13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 TRAM1L1Q8N609 369 aa13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 Q8N9G6 341 aaPredicted RBP13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 ZSCAN1Q8NBB4 408 aa13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 LRRC45Q96CN5 670 aa13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 PPP1R2P1Q96PQ5 205 aa13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 TBL1YQ9BQ87 522 aa13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 ZSCAN5AQ9BUG6 496 aa13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 TLR10Q9BXR5 811 aa13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 CDH19Q9H159 772 aa13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 SPATS2LQ9NUQ6 558 aaKnown RBP13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 TAAR2Q9P1P5 351 aa13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 PRKAB1Q9Y478 270 aa13.91□□□□□ -0.18
CCHCR1-211ENST00000467553 B8ZZF3 427 aa13.9□□□□□ -0.18
CCHCR1-211ENST00000467553 J3QKU1 62 aa13.9□□□□□ -0.18
CCHCR1-211ENST00000467553 LIASO43766 372 aa13.9□□□□□ -0.18
CCHCR1-211ENST00000467553 CEP104O60308 925 aa13.9□□□□□ -0.18
CCHCR1-211ENST00000467553 METTL18O95568 372 aa13.9□□□□□ -0.18
CCHCR1-211ENST00000467553 STIP1P31948 543 aaKnown RBP13.9□□□□□ -0.18
CCHCR1-211ENST00000467553 CXCR5P32302 372 aa13.9□□□□□ -0.18
CCHCR1-211ENST00000467553 ADRA1AP35348 466 aa13.9□□□□□ -0.18
CCHCR1-211ENST00000467553 HMGCLP35914 325 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms