RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 H3BRJ5 948 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 GRID2O43424 1007 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 VPS4BO75351 444 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 RNF8O76064 485 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 UBXN7O94888 489 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 GPR89BP0CG08 455 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 RARAP10276 462 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 FERP16591 822 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 DESP17661 470 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 CES1P23141 567 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 ARSEP51690 589 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 FOXM1Q08050 763 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 NIPAL4Q0D2K0 466 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 GALNT2Q10471 571 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 NADK2Q4G0N4 442 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 ABRAXAS1Q6UWZ7 409 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 WASH2PQ6VEQ5 465 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 RBM43Q6ZSC3 357 aaKnown RBP12.01□□□□□ -0.49
UBR4-211ENST00000467272 ZNF547Q8IVP9 402 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 BBS5Q8N3I7 341 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 ATPAF2Q8N5M1 289 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 ADAMTS17Q8TE56 1095 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 TEKT4Q8WW24 435 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 RSC1A1Q92681 617 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 RUFY1Q96T51 708 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 GPR87Q9BY21 358 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 POLR1EQ9GZS1 481 aaKnown RBP12.01□□□□□ -0.49
UBR4-211ENST00000467272 TWSG1Q9GZX9 223 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 FAM83DQ9H4H8 585 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 ACTL8Q9H568 366 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 PCDH18Q9HCL0 1135 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 NT5MQ9NPB1 228 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 WASH6PQ9NQA3 447 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 SEPT11Q9NVA2 429 aaKnown RBP12.01□□□□□ -0.49
UBR4-211ENST00000467272 DTLQ9NZJ0 730 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 NFKBIL1Q9UBC1 381 aaPredicted RBP12.01□□□□□ -0.49
UBR4-211ENST00000467272 AMACRQ9UHK6 382 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 VPS4AQ9UN37 437 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 NF1P21359 2839 aa12.01□□□□□ -0.49
UBR4-211ENST00000467272 ZNF106Q9H2Y7 1883 aaKnown RBP12□□□□□ -0.49
UBR4-211ENST00000467272 PIPSLA2A3N6 862 aa12□□□□□ -0.49
UBR4-211ENST00000467272 TTLL8A6PVC2 850 aa12□□□□□ -0.49
UBR4-211ENST00000467272 MATN3O15232 486 aa12□□□□□ -0.49
UBR4-211ENST00000467272 SNX2O60749 519 aa12□□□□□ -0.49
UBR4-211ENST00000467272 ASMTLO95671 621 aa12□□□□□ -0.49
UBR4-211ENST00000467272 CLDN1O95832 211 aa12□□□□□ -0.49
UBR4-211ENST00000467272 DDAH2O95865 285 aa12□□□□□ -0.49
UBR4-211ENST00000467272 MT-ND3P03897 115 aa12□□□□□ -0.49
UBR4-211ENST00000467272 MMP2P08253 660 aa12□□□□□ -0.49
UBR4-211ENST00000467272 MAPK9P45984 424 aa12□□□□□ -0.49
UBR4-211ENST00000467272 DSC2Q02487 901 aa12□□□□□ -0.49
UBR4-211ENST00000467272 SLC25A11Q02978 314 aaKnown RBP12□□□□□ -0.49
UBR4-211ENST00000467272 QPCTQ16769 361 aa12□□□□□ -0.49
UBR4-211ENST00000467272 AGAP9Q5VTM2 703 aa12□□□□□ -0.49
UBR4-211ENST00000467272 CPZQ66K79 652 aa12□□□□□ -0.49
UBR4-211ENST00000467272 E4F1Q66K89 784 aaPredicted RBP12□□□□□ -0.49
UBR4-211ENST00000467272 PWWP2BQ6NUJ5 590 aa12□□□□□ -0.49
UBR4-211ENST00000467272 C11orf96Q7Z7L8 435 aa12□□□□□ -0.49
UBR4-211ENST00000467272 ADGRG6Q86SQ4 1221 aa12□□□□□ -0.49
UBR4-211ENST00000467272 NDUFAF2Q8N183 169 aa12□□□□□ -0.49
UBR4-211ENST00000467272 THAP4Q8WY91 577 aa12□□□□□ -0.49
UBR4-211ENST00000467272 RNF31Q96EP0 1072 aa12□□□□□ -0.49
UBR4-211ENST00000467272 STAMBPL1Q96FJ0 436 aa12□□□□□ -0.49
UBR4-211ENST00000467272 TGM7Q96PF1 710 aa12□□□□□ -0.49
UBR4-211ENST00000467272 TSGA13Q96PP4 275 aa12□□□□□ -0.49
UBR4-211ENST00000467272 ZMYND15Q9H091 742 aa12□□□□□ -0.49
UBR4-211ENST00000467272 STAU2Q9NUL3 570 aaKnown RBP eCLIP12□□□□□ -0.49
UBR4-211ENST00000467272 RCOR3Q9P2K3 495 aaPredicted RBP12□□□□□ -0.49
UBR4-211ENST00000467272 CHKBQ9Y259 395 aa12□□□□□ -0.49
UBR4-211ENST00000467272 CELSR1Q9NYQ6 3014 aa12□□□□□ -0.49
UBR4-211ENST00000467272 CSMD2Q7Z408 3487 aa12□□□□□ -0.49
UBR4-211ENST00000467272 POLQO75417 2590 aa12□□□□□ -0.49
UBR4-211ENST00000467272 ENO4A6NNW6 628 aa11.99□□□□□ -0.49
UBR4-211ENST00000467272 TCP11X1B4DZS4 312 aa11.99□□□□□ -0.49
UBR4-211ENST00000467272 DDX3XO00571 662 aaKnown RBP eCLIP11.99□□□□□ -0.49
UBR4-211ENST00000467272 KATNA1O75449 491 aa11.99□□□□□ -0.49
UBR4-211ENST00000467272 FTLP02792 175 aaPredicted RBP11.99□□□□□ -0.49
UBR4-211ENST00000467272 TYRP1P17643 537 aa11.99□□□□□ -0.49
UBR4-211ENST00000467272 LPOP22079 712 aaPredicted RBP11.99□□□□□ -0.49
UBR4-211ENST00000467272 PTPN4P29074 926 aa11.99□□□□□ -0.49
UBR4-211ENST00000467272 SERPINB6P35237 376 aa11.99□□□□□ -0.49
UBR4-211ENST00000467272 ARL4AP40617 200 aa11.99□□□□□ -0.49
UBR4-211ENST00000467272 PRKCIP41743 596 aa11.99□□□□□ -0.49
UBR4-211ENST00000467272 DCDC1P59894 354 aa11.99□□□□□ -0.49
UBR4-211ENST00000467272 IL10RAQ13651 578 aa11.99□□□□□ -0.49
UBR4-211ENST00000467272 PAFAH1B3Q15102 231 aaKnown RBP11.99□□□□□ -0.49
UBR4-211ENST00000467272 SMTNL2Q2TAL5 461 aa11.99□□□□□ -0.49
UBR4-211ENST00000467272 ZNF571Q7Z3V5 609 aaPredicted RBP11.99□□□□□ -0.49
UBR4-211ENST00000467272 PPP1R3BQ86XI6 285 aa11.99□□□□□ -0.49
UBR4-211ENST00000467272 PHYKPLQ8IUZ5 450 aa11.99□□□□□ -0.49
UBR4-211ENST00000467272 NIPA2Q8N8Q9 360 aa11.99□□□□□ -0.49
UBR4-211ENST00000467272 SEC14L1Q92503 715 aa11.99□□□□□ -0.49
UBR4-211ENST00000467272 TCTN2Q96GX1 697 aa11.99□□□□□ -0.49
UBR4-211ENST00000467272 TRIB3Q96RU7 358 aa11.99□□□□□ -0.49
UBR4-211ENST00000467272 TIMM29Q9BSF4 260 aa11.99□□□□□ -0.49
UBR4-211ENST00000467272 ISCUQ9H1K1 167 aa11.99□□□□□ -0.49
UBR4-211ENST00000467272 OR2AG1Q9H205 316 aa11.99□□□□□ -0.49
UBR4-211ENST00000467272 TRIM39Q9HCM9 518 aa11.99□□□□□ -0.49
UBR4-211ENST00000467272 KLC4Q9NSK0 619 aa11.99□□□□□ -0.49
UBR4-211ENST00000467272 POT1Q9NUX5 634 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms