RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 MTERF1Q99551 399 aaKnown RBP4.21□□□□□ -1.74
LRCH3-211ENST00000466054 PIGMQ9H3S5 423 aa4.21□□□□□ -1.74
LRCH3-211ENST00000466054 ADD3Q9UEY8 706 aaKnown RBP4.21□□□□□ -1.74
LRCH3-211ENST00000466054 NENFQ9UMX5 172 aa4.21□□□□□ -1.74
LRCH3-211ENST00000466054 VDAC3Q9Y277 283 aa4.21□□□□□ -1.74
LRCH3-211ENST00000466054 hCG_1807616A0A1W2PRN6 198 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 LILRA5A6NI73 299 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 EIF4E1BA6NMX2 242 aaKnown RBP4.2□□□□□ -1.74
LRCH3-211ENST00000466054 ERI2A8K979 691 aaKnown RBP4.2□□□□□ -1.74
LRCH3-211ENST00000466054 B4DLN1 442 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 FAM90A26D6RGX4 464 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 TMCC2O75069 709 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 TPPPO94811 219 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 ZBTB11O95625 1053 aaPredicted RBP4.2□□□□□ -1.74
LRCH3-211ENST00000466054 PORP16435 677 aaPredicted RBP4.2□□□□□ -1.74
LRCH3-211ENST00000466054 S1PR1P21453 382 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 BDNFP23560 247 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 MRPL12P52815 198 aaKnown RBP4.2□□□□□ -1.74
LRCH3-211ENST00000466054 MRPS5P82675 430 aaKnown RBP4.2□□□□□ -1.74
LRCH3-211ENST00000466054 PDE1BQ01064 536 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 GRSF1Q12849 480 aaKnown RBP eCLIP4.2□□□□□ -1.74
LRCH3-211ENST00000466054 SLC39A14Q15043 492 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 SF3B4Q15427 424 aaKnown RBP eCLIP4.2□□□□□ -1.743e-9■■■■□ 22.6
LRCH3-211ENST00000466054 MRGPRG-AS1Q2M3A8 158 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 C18orf63Q68DL7 685 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 C16orf82Q7Z2V1 217 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 GPR180Q86V85 440 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 RNF113BQ8IZP6 322 aaKnown RBP4.2□□□□□ -1.74
LRCH3-211ENST00000466054 KCNH5Q8NCM2 988 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 LILRB1Q8NHL6 650 aaPredicted RBP4.2□□□□□ -1.74
LRCH3-211ENST00000466054 SPATA22Q8NHS9 363 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 HM13Q8TCT9 377 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 CALML4Q96GE6 196 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 TMEM19Q96HH6 336 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 FEM1CQ96JP0 617 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 DACH2Q96NX9 599 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 CMKLR1Q99788 373 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 TEX12Q9BXU0 123 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 TMEM30AQ9NV96 361 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 SEC63Q9UGP8 760 aaKnown RBP4.2□□□□□ -1.74
LRCH3-211ENST00000466054 FBXL2Q9UKC9 423 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 TMEM5Q9Y2B1 443 aa4.2□□□□□ -1.74
LRCH3-211ENST00000466054 TMEM184BQ9Y519 407 aaPredicted RBP4.2□□□□□ -1.74
LRCH3-211ENST00000466054 DENND3A2RUS2 1198 aa4.19□□□□□ -1.74
LRCH3-211ENST00000466054 MITFO75030 526 aaPredicted RBP4.19□□□□□ -1.74
LRCH3-211ENST00000466054 PPP1R3DO95685 299 aa4.19□□□□□ -1.74
LRCH3-211ENST00000466054 LDHCP07864 332 aa4.19□□□□□ -1.74
LRCH3-211ENST00000466054 USP8P40818 1118 aa4.19□□□□□ -1.74
LRCH3-211ENST00000466054 TMPOP42166 694 aaKnown RBP4.19□□□□□ -1.74
LRCH3-211ENST00000466054 MSH2P43246 934 aa4.19□□□□□ -1.74
LRCH3-211ENST00000466054 SLC15A1P46059 708 aa4.19□□□□□ -1.74
LRCH3-211ENST00000466054 PDLIM4P50479 330 aa4.19□□□□□ -1.74
LRCH3-211ENST00000466054 BRWD1-AS2P59051 145 aa4.19□□□□□ -1.74
LRCH3-211ENST00000466054 C9orf57Q5W0N0 161 aa4.19□□□□□ -1.74
LRCH3-211ENST00000466054 NSUN5P2Q63ZY6 315 aa4.19□□□□□ -1.74
LRCH3-211ENST00000466054 TPRG1Q6ZUI0 275 aa4.19□□□□□ -1.74
LRCH3-211ENST00000466054 ZNF34Q8IZ26 560 aa4.19□□□□□ -1.74
LRCH3-211ENST00000466054 TAGAPQ8N103 731 aa4.19□□□□□ -1.74
LRCH3-211ENST00000466054 C17orf53Q8N3J3 647 aaPredicted RBP4.19□□□□□ -1.74
LRCH3-211ENST00000466054 SLC38A9Q8NBW4 561 aa4.19□□□□□ -1.74
LRCH3-211ENST00000466054 FIG4Q92562 907 aa4.19□□□□□ -1.74
LRCH3-211ENST00000466054 PIGTQ969N2 578 aa4.19□□□□□ -1.74
LRCH3-211ENST00000466054 LRRC59Q96AG4 307 aaKnown RBP4.19□□□□□ -1.74
LRCH3-211ENST00000466054 SAT2Q96F10 170 aaPredicted RBP4.19□□□□□ -1.74
LRCH3-211ENST00000466054 NUDT16L1Q9BRJ7 211 aaKnown RBP4.19□□□□□ -1.74
LRCH3-211ENST00000466054 SRSF8Q9BRL6 282 aaKnown RBP4.19□□□□□ -1.74
LRCH3-211ENST00000466054 DDX31Q9H8H2 851 aaKnown RBP4.19□□□□□ -1.74
LRCH3-211ENST00000466054 EBF2Q9HAK2 575 aa4.19□□□□□ -1.74
LRCH3-211ENST00000466054 TRMT1Q9NXH9 659 aaKnown RBP4.19□□□□□ -1.74
LRCH3-211ENST00000466054 DBNLQ9UJU6 430 aaKnown RBP4.19□□□□□ -1.74
LRCH3-211ENST00000466054 KLHL20Q9Y2M5 609 aa4.19□□□□□ -1.74
LRCH3-211ENST00000466054 PTPRCP08575 1304 aa4.19□□□□□ -1.74
LRCH3-211ENST00000466054 A0A0G2JPF8 293 aa4.18□□□□□ -1.74
LRCH3-211ENST00000466054 A0A1W2PQ09 198 aa4.18□□□□□ -1.74
LRCH3-211ENST00000466054 LRRC72A6NJI9 287 aa4.18□□□□□ -1.74
LRCH3-211ENST00000466054 HNRNPCL3B7ZW38 293 aa4.18□□□□□ -1.74
LRCH3-211ENST00000466054 H3BQ06 376 aaPredicted RBP4.18□□□□□ -1.74
LRCH3-211ENST00000466054 ANKRD28O15084 1053 aa4.18□□□□□ -1.74
LRCH3-211ENST00000466054 SLC16A5O15375 505 aa4.18□□□□□ -1.74
LRCH3-211ENST00000466054 HNRNPCL4P0DMR1 293 aa4.18□□□□□ -1.74
LRCH3-211ENST00000466054 GCH1P30793 250 aa4.18□□□□□ -1.74
LRCH3-211ENST00000466054 CORO1AP31146 461 aaKnown RBP4.18□□□□□ -1.74
LRCH3-211ENST00000466054 MFAP4P55083 255 aa4.18□□□□□ -1.74
LRCH3-211ENST00000466054 CLDN20P56880 219 aa4.18□□□□□ -1.74
LRCH3-211ENST00000466054 SNX16P57768 344 aa4.18□□□□□ -1.74
LRCH3-211ENST00000466054 CDC16Q13042 620 aa4.18□□□□□ -1.74
LRCH3-211ENST00000466054 ARMC9Q7Z3E5 817 aa4.18□□□□□ -1.74
LRCH3-211ENST00000466054 CCDC190Q86UF4 302 aa4.18□□□□□ -1.74
LRCH3-211ENST00000466054 SFR1Q86XK3 245 aa4.18□□□□□ -1.74
LRCH3-211ENST00000466054 C1orf87Q8N0U7 546 aa4.18□□□□□ -1.74
LRCH3-211ENST00000466054 GCSAMQ8N6F7 178 aa4.18□□□□□ -1.74
LRCH3-211ENST00000466054 ABTB1Q969K4 478 aaPredicted RBP4.18□□□□□ -1.74
LRCH3-211ENST00000466054 JAKMIP2Q96AA8 810 aa4.18□□□□□ -1.74
LRCH3-211ENST00000466054 CDCA5Q96FF9 252 aa4.18□□□□□ -1.74
LRCH3-211ENST00000466054 IGSF21Q96ID5 467 aa4.18□□□□□ -1.74
LRCH3-211ENST00000466054 GAD1Q99259 594 aa4.18□□□□□ -1.74
LRCH3-211ENST00000466054 KRTAP4-3Q9BYR4 195 aa4.18□□□□□ -1.74
LRCH3-211ENST00000466054 HRH4Q9H3N8 390 aa4.18□□□□□ -1.74
LRCH3-211ENST00000466054 UBTD1Q9HAC8 227 aa4.18□□□□□ -1.74
LRCH3-211ENST00000466054 PADI3Q9ULW8 664 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms