RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 CNTN4Q8IWV2 1026 aa13.84□□□□□ -0.19
TGFBR3-204ENST00000465892 FAM83FQ8NEG4 500 aaPredicted RBP13.84□□□□□ -0.19
TGFBR3-204ENST00000465892 HDAC2Q92769 488 aaKnown RBP13.84□□□□□ -0.19
TGFBR3-204ENST00000465892 MBOAT4Q96T53 435 aa13.84□□□□□ -0.19
TGFBR3-204ENST00000465892 PLEKHA5Q9HAU0 1116 aa13.84□□□□□ -0.19
TGFBR3-204ENST00000465892 NEK6Q9HC98 313 aa13.84□□□□□ -0.19
TGFBR3-204ENST00000465892 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.84□□□□□ -0.192e-6■□□□□ 10.4
TGFBR3-204ENST00000465892 FBXO10Q9UK96 956 aa13.84□□□□□ -0.19
TGFBR3-204ENST00000465892 CST1P01037 141 aa13.84□□□□□ -0.19
TGFBR3-204ENST00000465892 FTH1P02794 183 aa13.84□□□□□ -0.19
TGFBR3-204ENST00000465892 PCMT1P22061 227 aa13.84□□□□□ -0.19
TGFBR3-204ENST00000465892 ALDH7A1P49419 539 aaKnown RBP13.84□□□□□ -0.19
TGFBR3-204ENST00000465892 TKTL1P51854 596 aa13.84□□□□□ -0.19
TGFBR3-204ENST00000465892 HNRNPFP52597 415 aaKnown RBP13.84□□□□□ -0.19
TGFBR3-204ENST00000465892 ILF2Q12905 390 aaKnown RBP13.84□□□□□ -0.19
TGFBR3-204ENST00000465892 SULT1C3Q6IMI6 304 aa13.84□□□□□ -0.19
TGFBR3-204ENST00000465892 CCDC103Q8IW40 242 aa13.84□□□□□ -0.19
TGFBR3-204ENST00000465892 OR13J1Q8NGT2 312 aa13.84□□□□□ -0.19
TGFBR3-204ENST00000465892 BPIFB1Q8TDL5 484 aa13.84□□□□□ -0.19
TGFBR3-204ENST00000465892 AFG1LQ8WV93 481 aa13.84□□□□□ -0.19
TGFBR3-204ENST00000465892 FAR1Q8WVX9 515 aa13.84□□□□□ -0.19
TGFBR3-204ENST00000465892 RORBQ92753 470 aa13.84□□□□□ -0.19
TGFBR3-204ENST00000465892 SLC52A3Q9NQ40 469 aa13.84□□□□□ -0.19
TGFBR3-204ENST00000465892 BOLA1Q9Y3E2 137 aa13.84□□□□□ -0.19
TGFBR3-204ENST00000465892 SPO11Q9Y5K1 396 aa13.84□□□□□ -0.19
TGFBR3-204ENST00000465892 NRCAMQ92823 1304 aa13.83□□□□□ -0.19
TGFBR3-204ENST00000465892 TNPO2O14787 897 aaKnown RBP13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 GOT2P00505 430 aaKnown RBP13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 FYNP06241 537 aa13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 CDH1P12830 882 aa13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 CBX2Q14781 532 aaPredicted RBP13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 AASDHQ4L235 1098 aaPredicted RBP13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 RSBN1Q5VWQ0 802 aaPredicted RBP13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 CYP2U1Q7Z449 544 aa13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 SLC22A9Q8IVM8 553 aa13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 MCOLN3Q8TDD5 553 aa13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 RNF34Q969K3 372 aa13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 VMP1Q96GC9 406 aa13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 TRIM54Q9BYV2 358 aa13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 IL37Q9NZH6 218 aa13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 TBC1D14Q9P2M4 693 aa13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 NOTOA8MTQ0 251 aa13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 A8MV72 311 aaPredicted RBP13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 USP2O75604 605 aaPredicted RBP13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 RFPL2O75678 378 aa13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 MFN2O95140 757 aa13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 FADS2O95864 444 aaKnown RBP13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 CHRNA1P02708 482 aa13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 ENO2P09104 434 aaPredicted RBP13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 INSRRP14616 1297 aa13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 IGFBP6P24592 240 aaPredicted RBP13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 ATP4BP51164 291 aa13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 HERVK_113P63132 956 aa13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 RACK1P63244 317 aaKnown RBP13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 CHRNB3Q05901 458 aa13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 SIM2Q14190 667 aaPredicted RBP13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 DESI1Q6ICB0 168 aa13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 TMC5Q6UXY8 1006 aa13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 RIMKLAQ8IXN7 391 aa13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 PAPD5Q8NDF8 572 aaKnown RBP13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 UBXN10Q96LJ8 280 aa13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 ERVK-6Q9BXR3 956 aa13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 C6orf62Q9GZU0 229 aaPredicted RBP13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 TKTL2Q9H0I9 626 aa13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 WDR6Q9NNW5 1121 aaKnown RBP13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 HACD3Q9P035 362 aa13.83□□□□□ -0.2
TGFBR3-204ENST00000465892 SCN4AP35499 1836 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 NUAK1O60285 661 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 MITFO75030 526 aaPredicted RBP13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 USP17L7P0C7H9 530 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 YWHAHQ04917 246 aaPredicted RBP13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 PTPRCAPQ14761 206 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 TRIP4Q15650 581 aaPredicted RBP13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 NKG7Q16617 165 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 TTC23Q5W5X9 447 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 STEAP3Q658P3 488 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 PTRH1Q86Y79 214 aaKnown RBP13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 GATAD2AQ86YP4 633 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 SYTL1Q8IYJ3 562 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 MED10Q9BTT4 135 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 TBCDQ9BTW9 1192 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 ULBP1Q9BZM6 244 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 MYOZ2Q9NPC6 264 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 GPR45Q9Y5Y3 372 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 LOC100130705A0A1B0GUX0 176 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 ILVBLA1L0T0 632 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 TTC34A8MYJ7 566 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 RAD51BO15315 384 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 DAB1O75553 588 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 UMPSP11172 480 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 IL12AP29459 219 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 TRPC1P48995 793 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 VAC14Q08AM6 782 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 SMN1Q16637 294 aaKnown RBP13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 FSCN1Q16658 493 aaKnown RBP13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 FKBP1CQ5VVH2 108 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 PPP2R2DQ66LE6 453 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 TMEM179BQ7Z7N9 219 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 P2RY8Q86VZ1 359 aa13.82□□□□□ -0.2
TGFBR3-204ENST00000465892 LYSMD2Q8IV50 215 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms