RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 TRIP13Q15645 432 aaPredicted RBP16.85■□□□□ 0.29
VPS52-215ENST00000464425 KHDC1Q4VXA5 237 aaKnown RBP16.85■□□□□ 0.29
VPS52-215ENST00000464425 PERM1Q5SV97 790 aa16.85■□□□□ 0.29
VPS52-215ENST00000464425 CCNI2Q6ZMN8 369 aaPredicted RBP16.85■□□□□ 0.29
VPS52-215ENST00000464425 CHST15Q7LFX5 561 aaPredicted RBP16.85■□□□□ 0.29
VPS52-215ENST00000464425 ADGRG6Q86SQ4 1221 aa16.85■□□□□ 0.29
VPS52-215ENST00000464425 LINC00523Q86TU6 105 aa16.85■□□□□ 0.29
VPS52-215ENST00000464425 TMPRSS12Q86WS5 348 aa16.85■□□□□ 0.29
VPS52-215ENST00000464425 PHYKPLQ8IUZ5 450 aa16.85■□□□□ 0.29
VPS52-215ENST00000464425 OR52K1Q8NGK4 314 aa16.85■□□□□ 0.29
VPS52-215ENST00000464425 OR13C4Q8NGS5 318 aa16.85■□□□□ 0.29
VPS52-215ENST00000464425 MAPK15Q8TD08 544 aa16.85■□□□□ 0.29
VPS52-215ENST00000464425 CNTNAP3BQ96NU0 1288 aa16.85■□□□□ 0.29
VPS52-215ENST00000464425 CNTNAP3Q9BZ76 1288 aa16.85■□□□□ 0.29
VPS52-215ENST00000464425 FAM221BA6H8Z2 402 aa16.84■□□□□ 0.29
VPS52-215ENST00000464425 GAPDHSO14556 408 aaPredicted RBP16.84■□□□□ 0.29
VPS52-215ENST00000464425 CASC3O15234 703 aaKnown RBP16.84■□□□□ 0.29
VPS52-215ENST00000464425 GRID2O43424 1007 aa16.84■□□□□ 0.29
VPS52-215ENST00000464425 OPA1O60313 960 aa16.84■□□□□ 0.29
VPS52-215ENST00000464425 NOBOXO60393 691 aa16.84■□□□□ 0.29
VPS52-215ENST00000464425 PPFIA2O75334 1257 aa16.84■□□□□ 0.29
VPS52-215ENST00000464425 GP1BAP07359 652 aa16.84■□□□□ 0.29
VPS52-215ENST00000464425 ACP5P13686 325 aa16.84■□□□□ 0.29
VPS52-215ENST00000464425 ACTR1BP42025 376 aa16.84■□□□□ 0.29
VPS52-215ENST00000464425 MAGEA6P43360 314 aa16.84■□□□□ 0.29
VPS52-215ENST00000464425 ACTR1AP61163 376 aa16.84■□□□□ 0.29
VPS52-215ENST00000464425 C2orf54Q08AI8 447 aa16.84■□□□□ 0.29
VPS52-215ENST00000464425 SEPT6Q14141 434 aa16.84■□□□□ 0.29
VPS52-215ENST00000464425 POU6F1Q14863 301 aa16.84■□□□□ 0.29
VPS52-215ENST00000464425 OGFOD3Q6PK18 319 aa16.84■□□□□ 0.29
VPS52-215ENST00000464425 CRTC3Q6UUV7 619 aa16.84■□□□□ 0.29
VPS52-215ENST00000464425 JAMLQ86YT9 394 aa16.84■□□□□ 0.29
VPS52-215ENST00000464425 CEP112Q8N8E3 955 aa16.84■□□□□ 0.29
VPS52-215ENST00000464425 GPR156Q8NFN8 814 aa16.84■□□□□ 0.29
VPS52-215ENST00000464425 ZNF398Q8TD17 642 aa16.84■□□□□ 0.29
VPS52-215ENST00000464425 ZDHHC1Q8WTX9 485 aa16.84■□□□□ 0.29
VPS52-215ENST00000464425 NAT6Q93015 286 aa16.84■□□□□ 0.29
VPS52-215ENST00000464425 VPS35Q96QK1 796 aa16.84■□□□□ 0.29
VPS52-215ENST00000464425 RMI1Q9H9A7 625 aa16.84■□□□□ 0.29
VPS52-215ENST00000464425 FKBPLQ9UIM3 349 aa16.84■□□□□ 0.29
VPS52-215ENST00000464425 CEP295Q9C0D2 2601 aa16.84■□□□□ 0.29
VPS52-215ENST00000464425 CTAGE15A4D2H0 777 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 FAM187AA6NFU0 413 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 C1QTNF9BB2RNN3 333 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 CCL22O00626 93 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 LDB2O43679 373 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 CDK14O94921 469 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 PRAMEF1O95521 474 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 APRTP07741 180 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 C1QTNF9P0C862 333 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 CTAGE8P0CG41 777 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 TPSB2P20231 275 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 PTPRBP23467 1997 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 GRIA1P42261 906 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 ZNF140P52738 457 aaPredicted RBP16.83■□□□□ 0.28
VPS52-215ENST00000464425 BASP1P80723 227 aaKnown RBP16.83■□□□□ 0.28
VPS52-215ENST00000464425 PDE1BQ01064 536 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 TARDBPQ13148 414 aaKnown RBP eCLIP16.83■□□□□ 0.28
VPS52-215ENST00000464425 TPSAB1Q15661 275 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 C14orf28Q4W4Y0 310 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 DNTTIP2Q5QJE6 756 aaKnown RBP16.83■□□□□ 0.28
VPS52-215ENST00000464425 PPP1R21Q6ZMI0 780 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 CTAGE6Q86UF2 777 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 CTAGE4Q8IX94 777 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 DNAAF3Q8N9W5 541 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 CCDC74AQ96AQ1 378 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 ARHGEF17Q96PE2 2063 aaPredicted RBP16.83■□□□□ 0.28
VPS52-215ENST00000464425 CCDC3Q9BQI4 270 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 L2HGDHQ9H9P8 463 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 RABGEF1Q9UJ41 708 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 CLCA2Q9UQC9 943 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 KCNK6Q9Y257 313 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 CHD8Q9HCK8 2581 aa16.83■□□□□ 0.28
VPS52-215ENST00000464425 RP1P56715 2156 aa16.82■□□□□ 0.28
VPS52-215ENST00000464425 TRBV23OR9-2A0A075B6M9 112 aa16.82■□□□□ 0.28
VPS52-215ENST00000464425 CCDC78A2IDD5 438 aa16.82■□□□□ 0.28
VPS52-215ENST00000464425 AP3B1O00203 1094 aa16.82■□□□□ 0.28
VPS52-215ENST00000464425 TTI1O43156 1089 aa16.82■□□□□ 0.28
VPS52-215ENST00000464425 SRP72O76094 671 aaKnown RBP16.82■□□□□ 0.28
VPS52-215ENST00000464425 MT-CO3P00414 261 aa16.82■□□□□ 0.28
VPS52-215ENST00000464425 VPS41P49754 854 aa16.82■□□□□ 0.28
VPS52-215ENST00000464425 TERF1P54274 439 aa16.82■□□□□ 0.28
VPS52-215ENST00000464425 MAZP56270 477 aaKnown RBP16.82■□□□□ 0.28
VPS52-215ENST00000464425 TMEM115Q12893 351 aaPredicted RBP16.82■□□□□ 0.28
VPS52-215ENST00000464425 ITGA9Q13797 1035 aa16.82■□□□□ 0.28
VPS52-215ENST00000464425 LRP8Q14114 963 aa16.82■□□□□ 0.28
VPS52-215ENST00000464425 KCNJ11Q14654 390 aa16.82■□□□□ 0.28
VPS52-215ENST00000464425 PLA2G4EQ3MJ16 856 aa16.82■□□□□ 0.28
VPS52-215ENST00000464425 CERCAMQ5T4B2 595 aa16.82■□□□□ 0.28
VPS52-215ENST00000464425 GPRC6AQ5T6X5 926 aa16.82■□□□□ 0.28
VPS52-215ENST00000464425 MICALCLQ6ZW33 695 aa16.82■□□□□ 0.28
VPS52-215ENST00000464425 PCGF5Q86SE9 256 aa16.82■□□□□ 0.28
VPS52-215ENST00000464425 MMGT1Q8N4V1 131 aa16.82■□□□□ 0.28
VPS52-215ENST00000464425 Q8N9G6 341 aaPredicted RBP16.82■□□□□ 0.28
VPS52-215ENST00000464425 DTX3LQ8TDB6 740 aa16.82■□□□□ 0.28
VPS52-215ENST00000464425 PATE1Q8WXA2 126 aa16.82■□□□□ 0.28
VPS52-215ENST00000464425 GATA6Q92908 595 aa16.82■□□□□ 0.28
VPS52-215ENST00000464425 DNAJC1Q96KC8 554 aaKnown RBP16.82■□□□□ 0.28
VPS52-215ENST00000464425 FAM96AQ9H5X1 160 aa16.82■□□□□ 0.28
VPS52-215ENST00000464425 ASB8Q9H765 288 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms