RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 LUC7LQ9NQ29 371 aaKnown RBP20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 KCNK6Q9Y257 313 aa20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 SPO11Q9Y5K1 396 aa20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 ATMQ13315 3056 aa20.3■□□□□ 0.84
PDLIM4-205ENST00000463615 B4E171 279 aa20.29■□□□□ 0.84
PDLIM4-205ENST00000463615 DUX1O43812 170 aa20.29■□□□□ 0.84
PDLIM4-205ENST00000463615 VEGFDO43915 354 aa20.29■□□□□ 0.84
PDLIM4-205ENST00000463615 PMPCBO75439 489 aa20.29■□□□□ 0.84
PDLIM4-205ENST00000463615 TSPAN7P41732 249 aa20.29■□□□□ 0.84
PDLIM4-205ENST00000463615 XRCC4Q13426 336 aa20.29■□□□□ 0.84
PDLIM4-205ENST00000463615 SPA17Q15506 151 aa20.29■□□□□ 0.84
PDLIM4-205ENST00000463615 ZDHHC20Q5W0Z9 365 aa20.29■□□□□ 0.84
PDLIM4-205ENST00000463615 BBS12Q6ZW61 710 aa20.29■□□□□ 0.84
PDLIM4-205ENST00000463615 B4GALNT4Q76KP1 1039 aa20.29■□□□□ 0.84
PDLIM4-205ENST00000463615 ARHGAP22Q7Z5H3 698 aa20.29■□□□□ 0.84
PDLIM4-205ENST00000463615 RCBTB1Q8NDN9 531 aa20.29■□□□□ 0.84
PDLIM4-205ENST00000463615 CCDC112Q8NEF3 446 aa20.29■□□□□ 0.84
PDLIM4-205ENST00000463615 QKIQ96PU8 341 aaKnown RBP eCLIP20.29■□□□□ 0.84
PDLIM4-205ENST00000463615 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.29■□□□□ 0.84
PDLIM4-205ENST00000463615 OR2AG1Q9H205 316 aa20.29■□□□□ 0.84
PDLIM4-205ENST00000463615 GOLPH3Q9H4A6 298 aa20.29■□□□□ 0.84
PDLIM4-205ENST00000463615 EFR3BQ9Y2G0 817 aa20.29■□□□□ 0.84
PDLIM4-205ENST00000463615 LILRA5A6NI73 299 aa20.28■□□□□ 0.84
PDLIM4-205ENST00000463615 NFKB1P19838 968 aa20.28■□□□□ 0.84
PDLIM4-205ENST00000463615 CYLC1P35663 651 aaPredicted RBP20.28■□□□□ 0.84
PDLIM4-205ENST00000463615 MARCKSL1P49006 195 aa20.28■□□□□ 0.84
PDLIM4-205ENST00000463615 ARSDP51689 593 aa20.28■□□□□ 0.84
PDLIM4-205ENST00000463615 WNT3AP56704 352 aa20.28■□□□□ 0.84
PDLIM4-205ENST00000463615 COPS2P61201 443 aa20.28■□□□□ 0.84
PDLIM4-205ENST00000463615 UBE2IP63279 158 aaKnown RBP20.28■□□□□ 0.84
PDLIM4-205ENST00000463615 ALS2CLQ60I27 953 aa20.28■□□□□ 0.84
PDLIM4-205ENST00000463615 KAZNQ674X7 775 aa20.28■□□□□ 0.84
PDLIM4-205ENST00000463615 ZFAND4Q86XD8 727 aa20.28■□□□□ 0.84
PDLIM4-205ENST00000463615 ZNF567Q8N184 647 aa20.28■□□□□ 0.84
PDLIM4-205ENST00000463615 TTC30BQ8N4P2 665 aa20.28■□□□□ 0.84
PDLIM4-205ENST00000463615 HTR3CQ8WXA8 447 aa20.28■□□□□ 0.84
PDLIM4-205ENST00000463615 MRGPRX2Q96LB1 330 aa20.28■□□□□ 0.84
PDLIM4-205ENST00000463615 PANX2Q96RD6 677 aa20.28■□□□□ 0.84
PDLIM4-205ENST00000463615 TIMM29Q9BSF4 260 aa20.28■□□□□ 0.84
PDLIM4-205ENST00000463615 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.28■□□□□ 0.84
PDLIM4-205ENST00000463615 HACD3Q9P035 362 aa20.28■□□□□ 0.84
PDLIM4-205ENST00000463615 TMEM9Q9P0T7 183 aa20.28■□□□□ 0.84
PDLIM4-205ENST00000463615 CPNE7Q9UBL6 633 aa20.28■□□□□ 0.84
PDLIM4-205ENST00000463615 TRHDEQ9UKU6 1024 aa20.28■□□□□ 0.84
PDLIM4-205ENST00000463615 TMPRSS11EQ9UL52 423 aa20.28■□□□□ 0.84
PDLIM4-205ENST00000463615 GCN1Q92616 2671 aaKnown RBP20.28■□□□□ 0.84
PDLIM4-205ENST00000463615 TRBV23OR9-2A0A075B6M9 112 aa20.27■□□□□ 0.84
PDLIM4-205ENST00000463615 APOC4-APOC2K7ER74 178 aa20.27■□□□□ 0.84
PDLIM4-205ENST00000463615 AURKAO14965 403 aa20.27■□□□□ 0.84
PDLIM4-205ENST00000463615 KMOO15229 486 aa20.27■□□□□ 0.84
PDLIM4-205ENST00000463615 APOC2P02655 101 aa20.27■□□□□ 0.84
PDLIM4-205ENST00000463615 XRCC1P18887 633 aaPredicted RBP20.27■□□□□ 0.84
PDLIM4-205ENST00000463615 CSTF2P33240 577 aaKnown RBP eCLIP20.27■□□□□ 0.84
PDLIM4-205ENST00000463615 MPP3Q13368 585 aa20.27■□□□□ 0.84
PDLIM4-205ENST00000463615 XKR5Q6UX68 686 aa20.27■□□□□ 0.84
PDLIM4-205ENST00000463615 WASH2PQ6VEQ5 465 aa20.27■□□□□ 0.84
PDLIM4-205ENST00000463615 BMPERQ8N8U9 685 aa20.27■□□□□ 0.84
PDLIM4-205ENST00000463615 SGF29Q96ES7 293 aa20.27■□□□□ 0.84
PDLIM4-205ENST00000463615 AHCYL2Q96HN2 611 aaKnown RBP20.27■□□□□ 0.84
PDLIM4-205ENST00000463615 OXNAD1Q96HP4 312 aaPredicted RBP20.27■□□□□ 0.84
PDLIM4-205ENST00000463615 MRFAP1L1Q96HT8 127 aa20.27■□□□□ 0.84
PDLIM4-205ENST00000463615 ASPSCR1Q9BZE9 553 aa20.27■□□□□ 0.84
PDLIM4-205ENST00000463615 WASH6PQ9NQA3 447 aa20.27■□□□□ 0.84
PDLIM4-205ENST00000463615 KLC4Q9NSK0 619 aa20.27■□□□□ 0.84
PDLIM4-205ENST00000463615 UBP1Q9NZI7 540 aa20.27■□□□□ 0.84
PDLIM4-205ENST00000463615 PCDHB11Q9Y5F2 797 aa20.27■□□□□ 0.84
PDLIM4-205ENST00000463615 ZNF462Q96JM2 2506 aa20.27■□□□□ 0.84
PDLIM4-205ENST00000463615 BTNL10A8MVZ5 291 aa20.26■□□□□ 0.83
PDLIM4-205ENST00000463615 STMND1H3BQB6 276 aa20.26■□□□□ 0.83
PDLIM4-205ENST00000463615 ITGB2P05107 769 aa20.26■□□□□ 0.83
PDLIM4-205ENST00000463615 ZNF7P17097 686 aaPredicted RBP20.26■□□□□ 0.83
PDLIM4-205ENST00000463615 HLA-DPA1P20036 260 aa20.26■□□□□ 0.83
PDLIM4-205ENST00000463615 CTNNA1P35221 906 aaKnown RBP20.26■□□□□ 0.83
PDLIM4-205ENST00000463615 PTPN7P35236 360 aa20.26■□□□□ 0.83
PDLIM4-205ENST00000463615 RAB15P59190 212 aa20.26■□□□□ 0.83
PDLIM4-205ENST00000463615 SIRPB2Q5JXA9 342 aa20.26■□□□□ 0.83
PDLIM4-205ENST00000463615 ZNF648Q5T619 568 aaPredicted RBP20.26■□□□□ 0.83
PDLIM4-205ENST00000463615 KIAA1614Q5VZ46 1190 aa20.26■□□□□ 0.83
PDLIM4-205ENST00000463615 ABRAXAS1Q6UWZ7 409 aa20.26■□□□□ 0.83
PDLIM4-205ENST00000463615 LRRTM4Q86VH4 590 aa20.26■□□□□ 0.83
PDLIM4-205ENST00000463615 ZC3H18Q86VM9 953 aaKnown RBP20.26■□□□□ 0.83
PDLIM4-205ENST00000463615 ZNF761Q86XN6 746 aaPredicted RBP20.26■□□□□ 0.83
PDLIM4-205ENST00000463615 ZNF547Q8IVP9 402 aa20.26■□□□□ 0.83
PDLIM4-205ENST00000463615 KRT35Q92764 455 aa20.26■□□□□ 0.83
PDLIM4-205ENST00000463615 PRDM8Q9NQV8 689 aa20.26■□□□□ 0.83
PDLIM4-205ENST00000463615 IL17CQ9P0M4 197 aa20.26■□□□□ 0.83
PDLIM4-205ENST00000463615 KLHL8Q9P2G9 620 aaPredicted RBP20.26■□□□□ 0.83
PDLIM4-205ENST00000463615 SLC23A2Q9UGH3 650 aa20.26■□□□□ 0.83
PDLIM4-205ENST00000463615 EPN1Q9Y6I3 576 aaPredicted RBP20.26■□□□□ 0.83
PDLIM4-205ENST00000463615 SDK2Q58EX2 2172 aa20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 SNX2O60749 519 aa20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 KCNJ13O60928 360 aa20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 PPFIA2O75334 1257 aa20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 CDK14O94921 469 aa20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 NDUFA10O95299 355 aa20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 NFATC2Q13469 925 aa20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 NOMO1Q15155 1222 aa20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 LLGL1Q15334 1064 aa20.25■□□□□ 0.83
PDLIM4-205ENST00000463615 SLC1A5Q15758 541 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms