RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 GRID2O43424 1007 aa19.58■□□□□ 0.72
COL9A3-204ENST00000463487 NUAK1O60285 661 aa19.58■□□□□ 0.72
COL9A3-204ENST00000463487 SEC31AO94979 1220 aaKnown RBP19.58■□□□□ 0.72
COL9A3-204ENST00000463487 CEACAM1P13688 526 aa19.58■□□□□ 0.72
COL9A3-204ENST00000463487 VCLP18206 1134 aa19.58■□□□□ 0.72
COL9A3-204ENST00000463487 IVDP26440 423 aa19.58■□□□□ 0.72
COL9A3-204ENST00000463487 CRADDP78560 199 aa19.58■□□□□ 0.72
COL9A3-204ENST00000463487 ACVR1Q04771 509 aa19.58■□□□□ 0.72
COL9A3-204ENST00000463487 TMEM115Q12893 351 aaPredicted RBP19.58■□□□□ 0.72
COL9A3-204ENST00000463487 C1orf61Q13536 156 aa19.58■□□□□ 0.72
COL9A3-204ENST00000463487 PYCR3Q53H96 274 aa19.58■□□□□ 0.72
COL9A3-204ENST00000463487 AARS2Q5JTZ9 985 aaKnown RBP19.58■□□□□ 0.72
COL9A3-204ENST00000463487 DNTTIP2Q5QJE6 756 aaKnown RBP19.58■□□□□ 0.72
COL9A3-204ENST00000463487 ZCCHC8Q6NZY4 707 aaKnown RBP19.58■□□□□ 0.72
COL9A3-204ENST00000463487 CERS6Q6ZMG9 384 aa19.58■□□□□ 0.72
COL9A3-204ENST00000463487 TAS2R42Q7RTR8 314 aa19.58■□□□□ 0.72
COL9A3-204ENST00000463487 TAF8Q7Z7C8 310 aa19.58■□□□□ 0.72
COL9A3-204ENST00000463487 ADGRG6Q86SQ4 1221 aa19.58■□□□□ 0.72
COL9A3-204ENST00000463487 LRRTM4Q86VH4 590 aa19.58■□□□□ 0.72
COL9A3-204ENST00000463487 NXPE1Q8N323 547 aa19.58■□□□□ 0.72
COL9A3-204ENST00000463487 SLC25A45Q8N413 288 aa19.58■□□□□ 0.72
COL9A3-204ENST00000463487 HDAC10Q969S8 669 aa19.58■□□□□ 0.72
COL9A3-204ENST00000463487 COPS8Q99627 209 aa19.58■□□□□ 0.72
COL9A3-204ENST00000463487 TMEM168Q9H0V1 697 aa19.58■□□□□ 0.72
COL9A3-204ENST00000463487 PNMA8BQ9ULN7 279 aaPredicted RBP19.58■□□□□ 0.72
COL9A3-204ENST00000463487 MAD1L1Q9Y6D9 718 aa19.58■□□□□ 0.72
COL9A3-204ENST00000463487 MYLKQ15746 1914 aa19.58■□□□□ 0.72
COL9A3-204ENST00000463487 TDRD6O60522 2096 aaKnown RBP19.58■□□□□ 0.72
COL9A3-204ENST00000463487 LRP4O75096 1905 aa19.57■□□□□ 0.72
COL9A3-204ENST00000463487 LAMA1P25391 3075 aa19.57■□□□□ 0.72
COL9A3-204ENST00000463487 F8W8V4 182 aa19.57■□□□□ 0.72
COL9A3-204ENST00000463487 CCL22O00626 93 aa19.57■□□□□ 0.72
COL9A3-204ENST00000463487 TM4SF5O14894 197 aa19.57■□□□□ 0.72
COL9A3-204ENST00000463487 KMOO15229 486 aa19.57■□□□□ 0.72
COL9A3-204ENST00000463487 AVILO75366 819 aa19.57■□□□□ 0.72
COL9A3-204ENST00000463487 LDOC1O95751 146 aaPredicted RBP19.57■□□□□ 0.72
COL9A3-204ENST00000463487 RPIAP49247 311 aa19.57■□□□□ 0.72
COL9A3-204ENST00000463487 NOVA1P51513 510 aaKnown RBP19.57■□□□□ 0.72
COL9A3-204ENST00000463487 ITGA8P53708 1063 aa19.57■□□□□ 0.72
COL9A3-204ENST00000463487 FASTKD1Q53R41 847 aaKnown RBP19.57■□□□□ 0.72
COL9A3-204ENST00000463487 HIBCHQ6NVY1 386 aaPredicted RBP19.57■□□□□ 0.72
COL9A3-204ENST00000463487 TRAPPC5Q8IUR0 188 aa19.57■□□□□ 0.72
COL9A3-204ENST00000463487 DEFB124Q8NES8 71 aa19.57■□□□□ 0.72
COL9A3-204ENST00000463487 OR13J1Q8NGT2 312 aa19.57■□□□□ 0.72
COL9A3-204ENST00000463487 SGSM3Q96HU1 749 aa19.57■□□□□ 0.72
COL9A3-204ENST00000463487 NAT9Q9BTE0 207 aa19.57■□□□□ 0.72
COL9A3-204ENST00000463487 ARFGAP3Q9NP61 516 aa19.57■□□□□ 0.72
COL9A3-204ENST00000463487 ZDHHC3Q9NYG2 299 aa19.57■□□□□ 0.72
COL9A3-204ENST00000463487 WHRNQ9P202 907 aa19.57■□□□□ 0.72
COL9A3-204ENST00000463487 FAM237BA0A1B0GVD1 139 aa19.56■□□□□ 0.72
COL9A3-204ENST00000463487 CCDC162PA2VCL2 907 aa19.56■□□□□ 0.72
COL9A3-204ENST00000463487 AGAP14A8MT82 685 aa19.56■□□□□ 0.72
COL9A3-204ENST00000463487 CHUKO15111 745 aa19.56■□□□□ 0.72
COL9A3-204ENST00000463487 PFDN6O15212 129 aa19.56■□□□□ 0.72
COL9A3-204ENST00000463487 DNAJC6O75061 913 aa19.56■□□□□ 0.72
COL9A3-204ENST00000463487 MTX2O75431 263 aa19.56■□□□□ 0.72
COL9A3-204ENST00000463487 ZNF8P17098 575 aaPredicted RBP19.56■□□□□ 0.72
COL9A3-204ENST00000463487 MAGEA3P43357 314 aa19.56■□□□□ 0.72
COL9A3-204ENST00000463487 ARL4CP56559 192 aa19.56■□□□□ 0.72
COL9A3-204ENST00000463487 HIF1AQ16665 826 aa19.56■□□□□ 0.72
COL9A3-204ENST00000463487 DEFB133Q30KQ1 61 aa19.56■□□□□ 0.72
COL9A3-204ENST00000463487 CHST15Q7LFX5 561 aaPredicted RBP19.56■□□□□ 0.72
COL9A3-204ENST00000463487 CCNJLQ8IV13 435 aa19.56■□□□□ 0.72
COL9A3-204ENST00000463487 OR4L1Q8NH43 312 aa19.56■□□□□ 0.72
COL9A3-204ENST00000463487 GABPB2Q8TAK5 448 aaPredicted RBP19.56■□□□□ 0.72
COL9A3-204ENST00000463487 GPBAR1Q8TDU6 330 aa19.56■□□□□ 0.72
COL9A3-204ENST00000463487 STAMBPL1Q96FJ0 436 aa19.56■□□□□ 0.72
COL9A3-204ENST00000463487 CLPBQ9H078 707 aa19.56■□□□□ 0.72
COL9A3-204ENST00000463487 VPS37BQ9H9H4 285 aa19.56■□□□□ 0.72
COL9A3-204ENST00000463487 TREX1Q9NSU2 369 aa19.56■□□□□ 0.72
COL9A3-204ENST00000463487 SLC2A6Q9UGQ3 507 aa19.56■□□□□ 0.72
COL9A3-204ENST00000463487 BTBD3Q9Y2F9 522 aa19.56■□□□□ 0.72
COL9A3-204ENST00000463487 SNX24Q9Y343 169 aa19.56■□□□□ 0.72
COL9A3-204ENST00000463487 TRBV5-4A0A0C4DH59 114 aa19.55■□□□□ 0.72
COL9A3-204ENST00000463487 KLHL33A6NCF5 533 aa19.55■□□□□ 0.72
COL9A3-204ENST00000463487 QSOX1O00391 747 aa19.55■□□□□ 0.72
COL9A3-204ENST00000463487 YY2O15391 372 aa19.55■□□□□ 0.72
COL9A3-204ENST00000463487 GPR39O43194 453 aa19.55■□□□□ 0.72
COL9A3-204ENST00000463487 TNFSF14O43557 240 aa19.55■□□□□ 0.72
COL9A3-204ENST00000463487 GOT2P00505 430 aaKnown RBP19.55■□□□□ 0.72
COL9A3-204ENST00000463487 POLBP06746 335 aa19.55■□□□□ 0.72
COL9A3-204ENST00000463487 KCNA4P22459 653 aa19.55■□□□□ 0.72
COL9A3-204ENST00000463487 ACRV1P26436 265 aa19.55■□□□□ 0.72
COL9A3-204ENST00000463487 RPL21P46778 160 aaKnown RBP19.55■□□□□ 0.72
COL9A3-204ENST00000463487 DUSP3P51452 185 aaPredicted RBP19.55■□□□□ 0.72
COL9A3-204ENST00000463487 ARSDP51689 593 aa19.55■□□□□ 0.72
COL9A3-204ENST00000463487 DAB2P98082 770 aa19.55■□□□□ 0.72
COL9A3-204ENST00000463487 CAV1Q03135 178 aa19.55■□□□□ 0.72
COL9A3-204ENST00000463487 ITIH4Q14624 930 aa19.55■□□□□ 0.72
COL9A3-204ENST00000463487 TRIP6Q15654 476 aaKnown RBP19.55■□□□□ 0.72
COL9A3-204ENST00000463487 INSCQ1MX18 579 aa19.55■□□□□ 0.72
COL9A3-204ENST00000463487 C6orf132Q5T0Z8 1188 aa19.55■□□□□ 0.72
COL9A3-204ENST00000463487 SERPINA9Q86WD7 417 aa19.55■□□□□ 0.72
COL9A3-204ENST00000463487 MMGT1Q8N4V1 131 aa19.55■□□□□ 0.72
COL9A3-204ENST00000463487 LRRC39Q96DD0 335 aa19.55■□□□□ 0.72
COL9A3-204ENST00000463487 CNDP2Q96KP4 475 aaKnown RBP19.55■□□□□ 0.72
COL9A3-204ENST00000463487 ZNF778Q96MU6 729 aa19.55■□□□□ 0.72
COL9A3-204ENST00000463487 CAMK1GQ96NX5 476 aa19.55■□□□□ 0.72
COL9A3-204ENST00000463487 DPH5Q9H2P9 285 aa19.55■□□□□ 0.72
COL9A3-204ENST00000463487 FAM96AQ9H5X1 160 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms