RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 SYVN1Q86TM6 617 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 IGFN1Q86VF2 1251 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 LRRTM3Q86VH5 581 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 OR13C4Q8NGS5 318 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 BLOC1S5Q8TDH9 187 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 SLC22A17Q8WUG5 538 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 CDCA5Q96FF9 252 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 ACOX2Q99424 681 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 ADNPQ9H2P0 1102 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 TFB2MQ9H5Q4 396 aaKnown RBP18.31■□□□□ 0.52
HPS3-204ENST00000462030 PALMDQ9NP74 551 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 GMIPQ9P107 970 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 RGS17Q9UGC6 210 aaPredicted RBP18.31■□□□□ 0.52
HPS3-204ENST00000462030 ZNF225Q9UK10 706 aa18.31■□□□□ 0.52
HPS3-204ENST00000462030 NCF1BA6NI72 391 aaPredicted RBP18.3■□□□□ 0.52
HPS3-204ENST00000462030 NCF1CA8MVU1 366 aaPredicted RBP18.3■□□□□ 0.52
HPS3-204ENST00000462030 ABCB7O75027 752 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 VPS4BO75351 444 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 CLPXO76031 633 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 PIRTP0C851 137 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 NCF1P14598 390 aaPredicted RBP18.3■□□□□ 0.52
HPS3-204ENST00000462030 NR4A1P22736 598 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 RXRGP48443 463 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 AGTR2P50052 363 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 ALDH3A2P51648 485 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 GSTM4Q03013 218 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 SELPLGQ14242 412 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 RGS21Q2M5E4 152 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 PRAMEF19Q5SWL8 479 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 FAM171BQ6P995 826 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 NCCRP1Q6ZVX7 275 aaPredicted RBP18.3■□□□□ 0.52
HPS3-204ENST00000462030 R3HCC1LQ7Z5L2 792 aaKnown RBP18.3■□□□□ 0.52
HPS3-204ENST00000462030 ZNF467Q7Z7K2 595 aaPredicted RBP18.3■□□□□ 0.52
HPS3-204ENST00000462030 PGBD5Q8N414 524 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 PSMG2Q969U7 264 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 NSMCE2Q96MF7 247 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 ABCC13Q9NSE7 274 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 EVLQ9UI08 416 aaPredicted RBP18.3■□□□□ 0.52
HPS3-204ENST00000462030 PSME2Q9UL46 239 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 RNF112Q9ULX5 631 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 KERAO60938 352 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 ALPLP05186 524 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 SCNN1GP51170 649 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 EMX2Q04743 252 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 DAG1Q14118 895 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 GTF2IRD2BQ6EKJ0 949 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 UGT3A1Q6NUS8 523 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 NIPAL1Q6NVV3 410 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 SCD5Q86SK9 330 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 GTF2IRD2Q86UP8 949 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 NAT16Q8N8M0 369 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 LEMD2Q8NC56 503 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 PDZD8Q8NEN9 1154 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 ARRDC2Q8TBH0 407 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 RAB2BQ8WUD1 216 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 NMUR1Q9HB89 426 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 FAM50BQ9Y247 325 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 ANKRD36A6QL64 1941 aa18.3■□□□□ 0.52
HPS3-204ENST00000462030 ENPP3O14638 875 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 ECI2O75521 394 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 DDNO94850 711 aaPredicted RBP18.29■□□□□ 0.52
HPS3-204ENST00000462030 THRBP10828 461 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 CDH1P12830 882 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 CDH3P22223 829 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 CRHBPP24387 322 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 BRCC3P46736 316 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 PLA2G16P53816 162 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 CBX2Q14781 532 aaPredicted RBP18.29■□□□□ 0.52
HPS3-204ENST00000462030 TSNQ15631 228 aaKnown RBP18.29■□□□□ 0.52
HPS3-204ENST00000462030 FXNQ16595 210 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 XKR7Q5GH72 579 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 HABP4Q5JVS0 413 aaKnown RBP18.29■□□□□ 0.52
HPS3-204ENST00000462030 ANKS6Q68DC2 871 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 PAQR3Q6TCH7 311 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 STK32CQ86UX6 486 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 PROSER1Q86XN7 944 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 LRRC49Q8IUZ0 686 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 CLEC4FQ8N1N0 589 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 SCML4Q8N228 414 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 DTWD1Q8N5C7 304 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 DCBLD1Q8N8Z6 715 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 OR10T2Q8NGX3 314 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 HASPINQ8TF76 798 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 NUDT8Q8WV74 236 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 ISG20Q96AZ6 181 aaKnown RBP18.29■□□□□ 0.52
HPS3-204ENST00000462030 AARSD1Q9BTE6 412 aaKnown RBP18.29■□□□□ 0.52
HPS3-204ENST00000462030 BRINP2Q9C0B6 783 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 ABHD16BQ9H3Z7 469 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 GPN2Q9H9Y4 310 aaPredicted RBP18.29■□□□□ 0.52
HPS3-204ENST00000462030 SP110Q9HB58 689 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.29■□□□□ 0.52
HPS3-204ENST00000462030 DOCK4Q8N1I0 1966 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 PTPRDP23468 1912 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 DYTNA2CJ06 578 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 RPS17P08708 135 aaKnown RBP18.29■□□□□ 0.52
HPS3-204ENST00000462030 ENO2P09104 434 aaPredicted RBP18.29■□□□□ 0.52
HPS3-204ENST00000462030 MTPNP58546 118 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 PIGFQ07326 219 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 AQP6Q13520 282 aa18.29■□□□□ 0.52
HPS3-204ENST00000462030 CRY1Q16526 586 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms