RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-208	ENST00000461578	RMI1	Q9H9A7	625 aa		13.55	□□□□□ -0.24
PABPC4-208	ENST00000461578	CHKB	Q9Y259	395 aa		13.55	□□□□□ -0.24
PABPC4-208	ENST00000461578	DNAJC16	Q9Y2G8	782 aa		13.55	□□□□□ -0.24
PABPC4-208	ENST00000461578	PCDHGA9	Q9Y5G4	932 aa	Known RBP	13.55	□□□□□ -0.24
PABPC4-208	ENST00000461578	GOLGA6L3	A6NEY3	463 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	PDZK1P1	A8MUH7	402 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578		H3BRJ5	948 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	TOX3	O15405	576 aa	Predicted RBP	13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	NUAK1	O60285	661 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	LDLR	P01130	860 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	XRCC1	P18887	633 aa	Predicted RBP	13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	PTPN4	P29074	926 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	ARL4A	P40617	200 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	PTGIR	P43119	386 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	PPP1CA	P62136	330 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	TUBB3	Q13509	450 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	KCNAB1	Q14722	419 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	KRT31	Q15323	416 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	CHRNA6	Q15825	494 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	INSC	Q1MX18	579 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	TDRD12	Q587J7	1177 aa	Known RBP	13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	PWWP2B	Q6NUJ5	590 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	PRSS42	Q7Z5A4	293 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578		Q8NA96	180 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	LPCAT1	Q8NF37	534 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	NEK11	Q8NG66	645 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	THAP4	Q8WY91	577 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	HSPH1	Q92598	858 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	OR2AG1	Q9H205	316 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	UCK1	Q9HA47	277 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	PDE7B	Q9NP56	450 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	MLXIPL	Q9NP71	852 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	PARVA	Q9NVD7	372 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	ZNF624	Q9P2J8	865 aa	Predicted RBP	13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	ATXN10	Q9UBB4	475 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	RARRES3	Q9UL19	164 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	ZNF451	Q9Y4E5	1061 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	TTLL3	Q9Y4R7	772 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	LRBA	P50851	2863 aa		13.54	□□□□□ -0.24
PABPC4-208	ENST00000461578	C1orf232	A0A0U1RR37	186 aa		13.53	□□□□□ -0.24
PABPC4-208	ENST00000461578	KRT86	O43790	486 aa		13.53	□□□□□ -0.24
PABPC4-208	ENST00000461578	DPM1	O60762	260 aa		13.53	□□□□□ -0.24
PABPC4-208	ENST00000461578	LRCH4	O75427	683 aa		13.53	□□□□□ -0.24
PABPC4-208	ENST00000461578	TPM2	P07951	284 aa		13.53	□□□□□ -0.24
PABPC4-208	ENST00000461578	FOLR1	P15328	257 aa		13.53	□□□□□ -0.24
PABPC4-208	ENST00000461578	NELFE	P18615	380 aa	Known RBP	13.53	□□□□□ -0.24
PABPC4-208	ENST00000461578	CAPZB	P47756	277 aa		13.53	□□□□□ -0.24
PABPC4-208	ENST00000461578	CDH6	P55285	790 aa		13.53	□□□□□ -0.24
PABPC4-208	ENST00000461578	RPS15	P62841	145 aa	Known RBP	13.53	□□□□□ -0.24
PABPC4-208	ENST00000461578	DSC2	Q02487	901 aa		13.53	□□□□□ -0.24
PABPC4-208	ENST00000461578	IHH	Q14623	411 aa		13.53	□□□□□ -0.24
PABPC4-208	ENST00000461578	NR6A1	Q15406	480 aa		13.53	□□□□□ -0.24
PABPC4-208	ENST00000461578	HENMT1	Q5T8I9	393 aa	Known RBP	13.53	□□□□□ -0.24
PABPC4-208	ENST00000461578	SYVN1	Q86TM6	617 aa		13.53	□□□□□ -0.24
PABPC4-208	ENST00000461578	TICAM1	Q8IUC6	712 aa		13.53	□□□□□ -0.24
PABPC4-208	ENST00000461578	AOPEP	Q8N6M6	819 aa		13.53	□□□□□ -0.24
PABPC4-208	ENST00000461578	SIDT2	Q8NBJ9	832 aa	Known RBP	13.53	□□□□□ -0.24
PABPC4-208	ENST00000461578	KLHL6	Q8WZ60	621 aa		13.53	□□□□□ -0.24
PABPC4-208	ENST00000461578	SEC14L1	Q92503	715 aa		13.53	□□□□□ -0.24
PABPC4-208	ENST00000461578	C19orf60	Q96EN9	201 aa		13.53	□□□□□ -0.24
PABPC4-208	ENST00000461578	CARD9	Q9H257	536 aa		13.53	□□□□□ -0.24
PABPC4-208	ENST00000461578	FAM83D	Q9H4H8	585 aa		13.53	□□□□□ -0.24
PABPC4-208	ENST00000461578	TRIM10	Q9UDY6	481 aa		13.53	□□□□□ -0.24
PABPC4-208	ENST00000461578	SLC23A2	Q9UGH3	650 aa		13.53	□□□□□ -0.24
PABPC4-208	ENST00000461578	TMEM191C	A6NGB0	347 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578		A6NL46	340 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	OR52A4P	A6NMU1	304 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	ZNF185	O15231	689 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	MTA2	O94776	668 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	RPL10	P27635	214 aa	Known RBP	13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	IL1R2	P27930	398 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	SPINT3	P49223	89 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	ZNF135	P52742	658 aa	Predicted RBP	13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	UBE2H	P62256	183 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	GPR18	Q14330	331 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	C1QL3	Q5VWW1	255 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	PAPD7	Q5XG87	772 aa	Known RBP	13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	ALS2CL	Q60I27	953 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	SLC6A19	Q695T7	634 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	PLEKHA7	Q6IQ23	1121 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	CYB5D1	Q6P9G0	228 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	CERS6	Q6ZMG9	384 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	POLN	Q7Z5Q5	900 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	PSTK	Q8IV42	348 aa	Known RBP	13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	TTC30B	Q8N4P2	665 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	FDCSP	Q8NFU4	85 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	ZNF653	Q96CK0	615 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	ZDHHC12	Q96GR4	267 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	CSPG4P5	Q96PW8	444 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	PHF12	Q96QT6	1004 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	NUDT9	Q9BW91	350 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	TDRD1	Q9BXT4	1180 aa	Known RBP	13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	GPR87	Q9BY21	358 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	POLR1E	Q9GZS1	481 aa	Known RBP	13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	DTL	Q9NZJ0	730 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	PKD2L2	Q9NZM6	624 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	DNPEP	Q9ULA0	475 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	FARSA	Q9Y285	508 aa	Known RBP	13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	ADGRG1	Q9Y653	693 aa		13.52	□□□□□ -0.25
PABPC4-208	ENST00000461578	IGHV5-51	A0A0C4DH38	117 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms