RNA–Protein interactions for RNA: ENST00000461018.5

CNN3-204, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-204ENST00000461018 NLGN3Q9NZ94 848 aa4.43□□□□□ -1.7
CNN3-204ENST00000461018 H2AFY2Q9P0M6 372 aaPredicted RBP4.43□□□□□ -1.7
CNN3-204ENST00000461018 SEPT10Q9P0V9 454 aa4.43□□□□□ -1.7
CNN3-204ENST00000461018 B4GALT6Q9UBX8 382 aa4.43□□□□□ -1.7
CNN3-204ENST00000461018 SCML2Q9UQR0 700 aa4.43□□□□□ -1.7
CNN3-204ENST00000461018 LOXL2Q9Y4K0 774 aa4.43□□□□□ -1.7
CNN3-204ENST00000461018 MDC1Q14676 2089 aaKnown RBP4.42□□□□□ -1.7
CNN3-204ENST00000461018 A0A1W2PRX2 142 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 CAPN14A8MX76 684 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 HHLA1C9JL84 531 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 NPIPB8E9PQR5 432 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 LATO43561 262 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 TLR5O60602 858 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 TCEA3O75764 348 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 CBX6O95503 412 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 PAEPP09466 180 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 TRIM49P0CI25 452 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 TRIM49CP0CI26 452 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 SETSIPP0DME0 302 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 ADRA1BP35368 520 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 ATP5C1P36542 298 aaKnown RBP4.42□□□□□ -1.7
CNN3-204ENST00000461018 RAD23BP54727 409 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 ADPRHP54922 357 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 CLDN2P57739 230 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 BPIFB4P59827 614 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 DGCR2P98153 550 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 GCNT1Q02742 428 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 SPIDRQ14159 915 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 TCEA2Q15560 299 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 INPP5JQ15735 1006 aaPredicted RBP4.42□□□□□ -1.7
CNN3-204ENST00000461018 CT47A1Q5JQC4 288 aaPredicted RBP4.42□□□□□ -1.7
CNN3-204ENST00000461018 RAB41Q5JT25 222 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 ZNF776Q68DI1 518 aaPredicted RBP4.42□□□□□ -1.7
CNN3-204ENST00000461018 ANKRD40Q6AI12 368 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 PM20D1Q6GTS8 502 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 TTI2Q6NXR4 508 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 ZNF517Q6ZMY9 492 aaPredicted RBP4.42□□□□□ -1.7
CNN3-204ENST00000461018 CLEC17AQ6ZS10 378 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 ENOSF1Q7L5Y1 443 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 TMEM135Q86UB9 458 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 ADIPOR2Q86V24 386 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 MMAAQ8IVH4 418 aaKnown RBP4.42□□□□□ -1.7
CNN3-204ENST00000461018 SLC35F3Q8IY50 421 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 BCL6BQ8N143 479 aaPredicted RBP4.42□□□□□ -1.7
CNN3-204ENST00000461018 ANKRD53Q8N9V6 530 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 ANKRD52Q8NB46 1076 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 GLIS1Q8NBF1 620 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 ZMIZ2Q8NF64 920 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 OR14C36Q8NHC7 312 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 UCMAQ8WVF2 138 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 SEMA4DQ92854 862 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 GRAMD1AQ96CP6 724 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 C5orf34Q96MH7 638 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 SMOQ99835 787 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 MED10Q9BTT4 135 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 DCLK3Q9C098 648 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 RSPH9Q9H1X1 276 aaPredicted RBP4.42□□□□□ -1.7
CNN3-204ENST00000461018 TCEAL2Q9H3H9 227 aaPredicted RBP4.42□□□□□ -1.7
CNN3-204ENST00000461018 APOBEC3GQ9HC16 384 aaKnown RBP4.42□□□□□ -1.7
CNN3-204ENST00000461018 CISHQ9NSE2 258 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.42□□□□□ -1.7
CNN3-204ENST00000461018 CHMP5Q9NZZ3 219 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 DNAI1Q9UI46 699 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 LSM7Q9UK45 103 aaKnown RBP4.42□□□□□ -1.7
CNN3-204ENST00000461018 TLK1Q9UKI8 766 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 MAN1B1Q9UKM7 699 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 CNTN6Q9UQ52 1028 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 ZNF510Q9Y2H8 683 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 MRPS18BQ9Y676 258 aaKnown RBP4.42□□□□□ -1.7
CNN3-204ENST00000461018 SLC30A1Q9Y6M5 507 aa4.42□□□□□ -1.7
CNN3-204ENST00000461018 TBC1D3DA0A087WVF3 549 aa4.41□□□□□ -1.7
CNN3-204ENST00000461018 TBC1D3IA0A087WXS9 549 aa4.41□□□□□ -1.7
CNN3-204ENST00000461018 TBC1D3EA0A087X179 549 aa4.41□□□□□ -1.7
CNN3-204ENST00000461018 TBC1D3KA0A087X1G2 549 aa4.41□□□□□ -1.7
CNN3-204ENST00000461018 LOC101059948A0A1B0GTJ6 334 aa4.41□□□□□ -1.7
CNN3-204ENST00000461018 GTPBP10A4D1E9 387 aaKnown RBP4.41□□□□□ -1.7
CNN3-204ENST00000461018 TBC1D3FA6NER0 549 aaPredicted RBP4.41□□□□□ -1.7
CNN3-204ENST00000461018 LRRC72A6NJI9 287 aa4.41□□□□□ -1.7
CNN3-204ENST00000461018 TBC1D3LB9A6J9 549 aa4.41□□□□□ -1.7
CNN3-204ENST00000461018 PRSS44E7EML9 344 aa4.41□□□□□ -1.7
CNN3-204ENST00000461018 XPO1O14980 1071 aaKnown RBP4.41□□□□□ -1.7
CNN3-204ENST00000461018 NPC1O15118 1278 aa4.41□□□□□ -1.7
CNN3-204ENST00000461018 GCATO75600 419 aa4.41□□□□□ -1.7
CNN3-204ENST00000461018 DNAJB5O75953 348 aa4.41□□□□□ -1.7
CNN3-204ENST00000461018 BEST1O76090 585 aa4.41□□□□□ -1.7
CNN3-204ENST00000461018 CNTN5O94779 1100 aa4.41□□□□□ -1.7
CNN3-204ENST00000461018 SORBS2O94875 1100 aaKnown RBP4.41□□□□□ -1.7
CNN3-204ENST00000461018 CLSTN1O94985 981 aa4.41□□□□□ -1.7
CNN3-204ENST00000461018 LATS1O95835 1130 aa4.41□□□□□ -1.7
CNN3-204ENST00000461018 TBC1D3HP0C7X1 549 aa4.41□□□□□ -1.7
CNN3-204ENST00000461018 RALAP11233 206 aa4.41□□□□□ -1.7
CNN3-204ENST00000461018 VDRP11473 427 aa4.41□□□□□ -1.7
CNN3-204ENST00000461018 CCDC130P13994 396 aa4.41□□□□□ -1.7
CNN3-204ENST00000461018 CD99P14209 185 aa4.41□□□□□ -1.7
CNN3-204ENST00000461018 PRLRP16471 622 aa4.41□□□□□ -1.7
CNN3-204ENST00000461018 HLA-FP30511 346 aa4.41□□□□□ -1.7
CNN3-204ENST00000461018 HNRNPH3P31942 346 aaKnown RBP4.41□□□□□ -1.7
CNN3-204ENST00000461018 SLC8A1P32418 973 aa4.41□□□□□ -1.7
CNN3-204ENST00000461018 UGT1A3P35503 534 aa4.41□□□□□ -1.7
CNN3-204ENST00000461018 CHKAP35790 457 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms