RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 M0QYG6 137 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 TRIM38O00635 465 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 IKBKBO14920 756 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 MAPK13O15264 365 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 BIRC5O15392 142 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 CCL16O15467 120 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 TTI1O43156 1089 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 HUS1O60921 280 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 RNF8O76064 485 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 BEST1O76090 585 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 NOL4O94818 638 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 KIAA0754O94854 1291 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 AGFG2O95081 481 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 TROVE2P10155 538 aaKnown RBP eCLIP4.91□□□□□ -1.621e-17■■■■■ 103.9
ATPAF1-203ENST00000460928 ODC1P11926 461 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 GJA1P17302 382 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 CYP2F1P24903 491 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 PON1P27169 355 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 GABRB3P28472 473 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 ADORA2BP29275 332 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 ATICP31939 592 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 GNL1P36915 607 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 CLCN4P51793 760 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 NDST1P52848 882 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 HDAC4P56524 1084 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 GSDMDP57764 484 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 TNNC1P63316 161 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 YWHAHQ04917 246 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 TUBB2AQ13885 445 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 NAA25Q14CX7 972 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 TAF5Q15542 800 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 SNCBQ16143 134 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 INAQ16352 499 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 ZNF667Q5HYK9 610 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 SH2D4BQ5SQS7 431 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 RARS2Q5T160 578 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 KRT39Q6A163 491 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 JMJD6Q6NYC1 403 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 SYCE2Q6PIF2 218 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 ZDHHC24Q6UX98 284 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 RFX8Q6ZV50 586 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 PAQR9Q6ZVX9 377 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 DOK3Q7L591 496 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 DGLUCYQ7Z3D6 616 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 XYLT1Q86Y38 959 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 DNAAF5Q86Y56 855 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 VRK3Q8IV63 474 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 FITM2Q8N6M3 262 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 LRRC52Q8N7C0 313 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 FBXL13Q8NEE6 735 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 APPL2Q8NEU8 664 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 STYXQ8WUJ0 223 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 TMEM174Q8WUU8 243 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 TFAP2BQ92481 460 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 P3H4Q92791 437 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 MYLPFQ96A32 169 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 UBXN10Q96LJ8 280 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 PKMYT1Q99640 499 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 SYT15Q9BQS2 421 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 TUBB2BQ9BVA1 445 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 TINAGL1Q9GZM7 467 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 SIK2Q9H0K1 926 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 NDST4Q9H3R1 872 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 TOR3AQ9H497 397 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 THAP9Q9H5L6 903 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 ZWILCHQ9H900 591 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 UBE2TQ9NPD8 197 aaPredicted RBP4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 NECTIN3Q9NQS3 549 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 PAPOLBQ9NRJ5 636 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 RAB20Q9NX57 234 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 GDAP2Q9NXN4 497 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 IFNKQ9P0W0 207 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 GCNT4Q9P109 453 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 COG5Q9UP83 839 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 SORCS3Q9UPU3 1222 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 ITM2BQ9Y287 266 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 SSX2IPQ9Y2D8 614 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 IKBKGQ9Y6K9 419 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 FAM169AQ9Y6X4 670 aa4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 MTCL1Q9Y4B5 1905 aaKnown RBP4.91□□□□□ -1.62
ATPAF1-203ENST00000460928 PTPRDP23468 1912 aa4.9□□□□□ -1.62
ATPAF1-203ENST00000460928 MTMR11A4FU01 709 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 TMEM110-MUSTN1A8MSY1 372 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 BECN2A8MW95 431 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 A8MXQ7 604 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 FAM25EA8MYX2 175 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 PIP5K1BO14986 540 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 SYN3O14994 580 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 NCAM2O15394 837 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 P4HA2O15460 535 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 IRAK2O43187 625 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 DCXO43602 365 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 TRAPPC3O43617 180 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 TMCC1O94876 653 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 OAZ2O95190 189 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 GNA14O95837 355 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 CHEK2O96017 543 aa4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 VIMP08670 466 aaKnown RBP4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 PIM1P11309 404 aaPredicted RBP4.9□□□□□ -1.63
ATPAF1-203ENST00000460928 ATF6P18850 670 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 221.7 ms