RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 RD3Q7Z3Z2 195 aa22.23■■□□□ 1.15
C9orf3-209ENST00000460573 TRIM74Q86UV6 250 aa22.23■■□□□ 1.15
C9orf3-209ENST00000460573 HEXDCQ8WVB3 486 aa22.23■■□□□ 1.15
C9orf3-209ENST00000460573 HDAC10Q969S8 669 aa22.23■■□□□ 1.15
C9orf3-209ENST00000460573 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.23■■□□□ 1.151e-8■■■■■ 41.2
C9orf3-209ENST00000460573 LRRC39Q96DD0 335 aa22.23■■□□□ 1.15
C9orf3-209ENST00000460573 TTC25Q96NG3 672 aa22.23■■□□□ 1.15
C9orf3-209ENST00000460573 CAMK1GQ96NX5 476 aa22.23■■□□□ 1.15
C9orf3-209ENST00000460573 NAT9Q9BTE0 207 aa22.23■■□□□ 1.15
C9orf3-209ENST00000460573 SUDS3Q9H7L9 328 aaPredicted RBP22.23■■□□□ 1.15
C9orf3-209ENST00000460573 SLC2A6Q9UGQ3 507 aa22.23■■□□□ 1.15
C9orf3-209ENST00000460573 MOSPD1Q9UJG1 213 aa22.23■■□□□ 1.15
C9orf3-209ENST00000460573 PNMA8BQ9ULN7 279 aaPredicted RBP22.23■■□□□ 1.15
C9orf3-209ENST00000460573 TMEM98Q9Y2Y6 226 aa22.23■■□□□ 1.15
C9orf3-209ENST00000460573 OAS3Q9Y6K5 1087 aaKnown RBP22.23■■□□□ 1.15
C9orf3-209ENST00000460573 CACNA1BQ00975 2339 aa22.22■■□□□ 1.15
C9orf3-209ENST00000460573 TRBV5-4A0A0C4DH59 114 aa22.22■■□□□ 1.15
C9orf3-209ENST00000460573 CCDC78A2IDD5 438 aa22.22■■□□□ 1.15
C9orf3-209ENST00000460573 CCL22O00626 93 aa22.22■■□□□ 1.15
C9orf3-209ENST00000460573 TP73O15350 636 aa22.22■■□□□ 1.15
C9orf3-209ENST00000460573 FLRT2O43155 660 aa22.22■■□□□ 1.15
C9orf3-209ENST00000460573 HYAL3O43820 417 aaPredicted RBP22.22■■□□□ 1.15
C9orf3-209ENST00000460573 NUAK1O60285 661 aa22.22■■□□□ 1.15
C9orf3-209ENST00000460573 PAMP19021 973 aa22.22■■□□□ 1.15
C9orf3-209ENST00000460573 DGKAP23743 735 aa22.22■■□□□ 1.15
C9orf3-209ENST00000460573 CBLBQ13191 982 aa22.22■■□□□ 1.15
C9orf3-209ENST00000460573 ELOCQ15369 112 aa22.22■■□□□ 1.15
C9orf3-209ENST00000460573 HIF1AQ16665 826 aa22.22■■□□□ 1.15
C9orf3-209ENST00000460573 GPRC6AQ5T6X5 926 aa22.22■■□□□ 1.15
C9orf3-209ENST00000460573 DOK6Q6PKX4 331 aa22.22■■□□□ 1.15
C9orf3-209ENST00000460573 CCNJLQ8IV13 435 aa22.22■■□□□ 1.15
C9orf3-209ENST00000460573 NOA1Q8NC60 698 aaKnown RBP22.22■■□□□ 1.15
C9orf3-209ENST00000460573 OR4L1Q8NH43 312 aa22.22■■□□□ 1.15
C9orf3-209ENST00000460573 SEC14L1Q92503 715 aa22.22■■□□□ 1.15
C9orf3-209ENST00000460573 PDXPQ96GD0 296 aa22.22■■□□□ 1.15
C9orf3-209ENST00000460573 TTC1Q99614 292 aa22.22■■□□□ 1.15
C9orf3-209ENST00000460573 CARS2Q9HA77 564 aaKnown RBP22.22■■□□□ 1.15
C9orf3-209ENST00000460573 MRPL40Q9NQ50 206 aaKnown RBP22.22■■□□□ 1.15
C9orf3-209ENST00000460573 TRNAU1APQ9NX07 287 aaKnown RBP22.22■■□□□ 1.15
C9orf3-209ENST00000460573 ATXN10Q9UBB4 475 aa22.22■■□□□ 1.15
C9orf3-209ENST00000460573 SUFUQ9UMX1 484 aa22.22■■□□□ 1.15
C9orf3-209ENST00000460573 CCDC162PA2VCL2 907 aa22.21■■□□□ 1.15
C9orf3-209ENST00000460573 AQP9O43315 295 aa22.21■■□□□ 1.15
C9orf3-209ENST00000460573 CDK14O94921 469 aa22.21■■□□□ 1.15
C9orf3-209ENST00000460573 TOP3BO95985 862 aaKnown RBP22.21■■□□□ 1.15
C9orf3-209ENST00000460573 RALBP11234 206 aa22.21■■□□□ 1.15
C9orf3-209ENST00000460573 NMBRP28336 390 aa22.21■■□□□ 1.15
C9orf3-209ENST00000460573 PPARGP37231 505 aaPredicted RBP22.21■■□□□ 1.15
C9orf3-209ENST00000460573 POLD2P49005 469 aa22.21■■□□□ 1.15
C9orf3-209ENST00000460573 IL9RQ01113 521 aa22.21■■□□□ 1.15
C9orf3-209ENST00000460573 DHX9Q08211 1270 aaKnown RBP22.21■■□□□ 1.15
C9orf3-209ENST00000460573 TMEM115Q12893 351 aaPredicted RBP22.21■■□□□ 1.15
C9orf3-209ENST00000460573 GTF2H3Q13889 308 aa22.21■■□□□ 1.15
C9orf3-209ENST00000460573 PRRT3Q5FWE3 981 aa22.21■■□□□ 1.15
C9orf3-209ENST00000460573 FNBP1LQ5T0N5 605 aa22.21■■□□□ 1.15
C9orf3-209ENST00000460573 LYPLAL1Q5VWZ2 237 aa22.21■■□□□ 1.15
C9orf3-209ENST00000460573 CERS6Q6ZMG9 384 aa22.21■■□□□ 1.15
C9orf3-209ENST00000460573 KANSL1Q7Z3B3 1105 aa22.21■■□□□ 1.15
C9orf3-209ENST00000460573 ADGRG6Q86SQ4 1221 aa22.21■■□□□ 1.15
C9orf3-209ENST00000460573 TMEM135Q86UB9 458 aa22.21■■□□□ 1.15
C9orf3-209ENST00000460573 RBFAQ8N0V3 343 aa22.21■■□□□ 1.15
C9orf3-209ENST00000460573 NXPE1Q8N323 547 aa22.21■■□□□ 1.15
C9orf3-209ENST00000460573 MPP5Q8N3R9 675 aa22.21■■□□□ 1.15
C9orf3-209ENST00000460573 ZNF548Q8NEK5 533 aaPredicted RBP22.21■■□□□ 1.15
C9orf3-209ENST00000460573 OR6P1Q8NGX9 317 aa22.21■■□□□ 1.15
C9orf3-209ENST00000460573 ART4Q93070 314 aa22.21■■□□□ 1.15
C9orf3-209ENST00000460573 MFSD3Q96ES6 412 aa22.21■■□□□ 1.15
C9orf3-209ENST00000460573 STAMBPL1Q96FJ0 436 aa22.21■■□□□ 1.15
C9orf3-209ENST00000460573 OR2AG1Q9H205 316 aa22.21■■□□□ 1.15
C9orf3-209ENST00000460573 GRHL1Q9NZI5 618 aa22.21■■□□□ 1.15
C9orf3-209ENST00000460573 APOBEC2Q9Y235 224 aaKnown RBP22.21■■□□□ 1.15
C9orf3-209ENST00000460573 MAD1L1Q9Y6D9 718 aa22.21■■□□□ 1.15
C9orf3-209ENST00000460573 KNL1Q8NG31 2342 aa22.2■■□□□ 1.15
C9orf3-209ENST00000460573 MAP1BP46821 2468 aaKnown RBP22.2■■□□□ 1.14
C9orf3-209ENST00000460573 CFAP99D6REC4 459 aa22.2■■□□□ 1.14
C9orf3-209ENST00000460573 CHUKO15111 745 aa22.2■■□□□ 1.14
C9orf3-209ENST00000460573 SCAMP1O15126 338 aa22.2■■□□□ 1.14
C9orf3-209ENST00000460573 SDC3O75056 442 aa22.2■■□□□ 1.14
C9orf3-209ENST00000460573 DNAJC6O75061 913 aa22.2■■□□□ 1.14
C9orf3-209ENST00000460573 USP1O94782 785 aa22.2■■□□□ 1.14
C9orf3-209ENST00000460573 TTC4O95801 387 aa22.2■■□□□ 1.14
C9orf3-209ENST00000460573 GOT2P00505 430 aaKnown RBP22.2■■□□□ 1.14
C9orf3-209ENST00000460573 FUCA1P04066 466 aa22.2■■□□□ 1.14
C9orf3-209ENST00000460573 POLBP06746 335 aa22.2■■□□□ 1.14
C9orf3-209ENST00000460573 MSH3P20585 1137 aa22.2■■□□□ 1.14
C9orf3-209ENST00000460573 FOXN2P32314 431 aa22.2■■□□□ 1.14
C9orf3-209ENST00000460573 GNPDA1P46926 289 aa22.2■■□□□ 1.14
C9orf3-209ENST00000460573 BBS9Q3SYG4 887 aa22.2■■□□□ 1.14
C9orf3-209ENST00000460573 ANKRD20A4Q4UJ75 823 aa22.2■■□□□ 1.14
C9orf3-209ENST00000460573 PYCR3Q53H96 274 aa22.2■■□□□ 1.14
C9orf3-209ENST00000460573 FASTKD1Q53R41 847 aaKnown RBP22.2■■□□□ 1.14
C9orf3-209ENST00000460573 KIAA0930Q6ICG6 404 aaPredicted RBP22.2■■□□□ 1.14
C9orf3-209ENST00000460573 TAS2R42Q7RTR8 314 aa22.2■■□□□ 1.14
C9orf3-209ENST00000460573 GALNT13Q8IUC8 556 aa22.2■■□□□ 1.14
C9orf3-209ENST00000460573 SLC25A45Q8N413 288 aa22.2■■□□□ 1.14
C9orf3-209ENST00000460573 LMX1AQ8TE12 382 aa22.2■■□□□ 1.14
C9orf3-209ENST00000460573 RHBDD1Q8TEB9 315 aa22.2■■□□□ 1.14
C9orf3-209ENST00000460573 ZNF514Q96K75 400 aaPredicted RBP22.2■■□□□ 1.14
C9orf3-209ENST00000460573 COPS8Q99627 209 aa22.2■■□□□ 1.14
C9orf3-209ENST00000460573 EBNA1BP2Q99848 306 aaKnown RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms