RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 ARL1P40616 181 aaPredicted RBP3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 EIF3BP55884 814 aaKnown RBP3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 DLX5P56178 289 aa3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 SEC61BP60468 96 aaKnown RBP3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 NUCB1Q02818 461 aa3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 ZNF155Q12901 538 aaPredicted RBP3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 ZBTB17Q13105 803 aa3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 NAE1Q13564 534 aa3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 C1orf141Q5JVX7 400 aa3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 INO80CQ6PI98 192 aaPredicted RBP3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 TAOK1Q7L7X3 1001 aa3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 CHERPQ8IWX8 916 aaKnown RBP3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 ODF3L1Q8IXM7 274 aa3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 METTL6Q8TCB7 284 aa3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 SECTM1Q8WVN6 248 aa3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 SORCS1Q8WY21 1168 aa3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 TANKQ92844 425 aa3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 SAAL1Q96ER3 474 aa3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 TMEM19Q96HH6 336 aa3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 SLC41A2Q96JW4 573 aa3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 FAM110AQ9BQ89 295 aa3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 DCTPP1Q9H773 170 aa3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 LRRC4Q9HBW1 653 aa3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 MMP25Q9NPA2 562 aa3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 HINT3Q9NQE9 182 aaKnown RBP3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 HYPKQ9NX55 129 aa3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 SMARCAL1Q9NZC9 954 aa3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 DBF4Q9UBU7 674 aaPredicted RBP3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 INTS6Q9UL03 887 aaKnown RBP3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 ICAM5Q9UMF0 924 aa3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 ERVK-11Q9UQG0 969 aa3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 PXDNQ92626 1479 aa3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 ATXN2Q99700 1313 aaKnown RBP3.65□□□□□ -1.83
SSX2IP-204ENST00000459708 LAMB4A4D0S4 1761 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 SIPA1L3O60292 1781 aaPredicted RBP3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 IGHV4OR15-8A0A075B7B6 117 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 HNRNPCL2B2RXH8 293 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 ERVV-2B6SEH9 535 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 USP17L23D6RBM5 183 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 ZNF587BE7ETH6 402 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 VCYO14598 125 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 LDB3O75112 727 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 ZNF432O94892 652 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 DDIT3P35638 169 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 RGS2P41220 211 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 METAP2P50579 478 aaKnown RBP eCLIP3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 ECT2LQ008S8 904 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 TEFQ10587 303 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 ZNF672Q499Z4 452 aaPredicted RBP3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 CXorf66Q5JRM2 361 aaPredicted RBP3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 WBP2NLQ6ICG8 309 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 PQLC2Q6ZP29 291 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 MMS22LQ6ZRQ5 1243 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 CUZD1Q86UP6 607 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 CCDC13Q8IYE1 715 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 SPATA6LQ8N4H0 392 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 RFLNBQ8N5W9 214 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 TSPYL6Q8N831 410 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 KBTBD3Q8NAB2 608 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 NEK9Q8TD19 979 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 DUSP19Q8WTR2 217 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 GTF3C6Q969F1 213 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 C1QTNF5Q9BXJ0 243 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 CSTL1Q9H114 145 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 NDST4Q9H3R1 872 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 EBF2Q9HAK2 575 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 KIF9Q9HAQ2 790 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 SCPEP1Q9HB40 452 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 DONSONQ9NYP3 566 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 ABI3Q9P2A4 366 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 UTYO14607 1347 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 TTC41PQ6P2S7 1318 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 RAD50Q92878 1312 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 PCDH11XQ9BZA7 1347 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 PCDH11YQ9BZA8 1340 aa3.64□□□□□ -1.83
SSX2IP-204ENST00000459708 SPEF2Q9C093 1822 aa3.63□□□□□ -1.83
SSX2IP-204ENST00000459708 TAF1P21675 1872 aa3.63□□□□□ -1.83
SSX2IP-204ENST00000459708 A0A0G2JPF8 293 aa3.63□□□□□ -1.83
SSX2IP-204ENST00000459708 TTC36A6NLP5 189 aa3.63□□□□□ -1.83
SSX2IP-204ENST00000459708 LRRC53A6NM62 1247 aa3.63□□□□□ -1.83
SSX2IP-204ENST00000459708 HNRNPCL3B7ZW38 293 aa3.63□□□□□ -1.83
SSX2IP-204ENST00000459708 HNRNPCL1O60812 293 aaKnown RBP3.63□□□□□ -1.83
SSX2IP-204ENST00000459708 HNRNPCL4P0DMR1 293 aa3.63□□□□□ -1.83
SSX2IP-204ENST00000459708 SRCP12931 536 aa3.63□□□□□ -1.83
SSX2IP-204ENST00000459708 IL7RP16871 459 aa3.63□□□□□ -1.83
SSX2IP-204ENST00000459708 MCCP23508 829 aa3.63□□□□□ -1.83
SSX2IP-204ENST00000459708 PIP4K2AP48426 406 aaPredicted RBP3.63□□□□□ -1.83
SSX2IP-204ENST00000459708 CLCNKAP51800 687 aa3.63□□□□□ -1.83
SSX2IP-204ENST00000459708 CASP6P55212 293 aa3.63□□□□□ -1.83
SSX2IP-204ENST00000459708 HNRNPH2P55795 449 aaKnown RBP3.63□□□□□ -1.83
SSX2IP-204ENST00000459708 RELQ04864 619 aaPredicted RBP3.63□□□□□ -1.83
SSX2IP-204ENST00000459708 SLC20A2Q08357 652 aa3.63□□□□□ -1.83
SSX2IP-204ENST00000459708 GSTA3Q16772 222 aa3.63□□□□□ -1.83
SSX2IP-204ENST00000459708 ALFQ53S48 1182 aa3.63□□□□□ -1.83
SSX2IP-204ENST00000459708 INTS11Q5TA45 600 aaKnown RBP3.63□□□□□ -1.83
SSX2IP-204ENST00000459708 PLEKHA7Q6IQ23 1121 aa3.63□□□□□ -1.83
SSX2IP-204ENST00000459708 ZNF280DQ6N043 979 aa3.63□□□□□ -1.83
SSX2IP-204ENST00000459708 RGMBQ6NW40 437 aa3.63□□□□□ -1.83
SSX2IP-204ENST00000459708 CDC73Q6P1J9 531 aa3.63□□□□□ -1.83
SSX2IP-204ENST00000459708 KCTD18Q6PI47 426 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms