RNA–Protein interactions for RNA: ENST00000457662.2

TRIM13-206, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-206ENST00000457662 GPSM3Q9Y4H4 160 aa18■□□□□ 0.47
TRIM13-206ENST00000457662 MYLKQ15746 1914 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 ARID1BQ8NFD5 2236 aaPredicted RBP17.99■□□□□ 0.47
TRIM13-206ENST00000457662 CCDC162PA2VCL2 907 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 CTAGE15A4D2H0 777 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 YY2O15391 372 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 GPR39O43194 453 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 GRID2O43424 1007 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 CBFA2T3O75081 653 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 CTAGE8P0CG41 777 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 GIMD1P0DJR0 217 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 ZNF8P17098 575 aaPredicted RBP17.99■□□□□ 0.47
TRIM13-206ENST00000457662 RPL21P46778 160 aaKnown RBP17.99■□□□□ 0.47
TRIM13-206ENST00000457662 ITGA8P53708 1063 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 PRAMEP78395 509 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 GTF2H3Q13889 308 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 ZNF648Q5T619 568 aaPredicted RBP17.99■□□□□ 0.47
TRIM13-206ENST00000457662 CTAGE6Q86UF2 777 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 CTAGE4Q8IX94 777 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 NXPE1Q8N323 547 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 CEP112Q8N8E3 955 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 OR6P1Q8NGX9 317 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 OR4C6Q8NH72 309 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 GPBAR1Q8TDU6 330 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 SGSM3Q96HU1 749 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 CAMK1GQ96NX5 476 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 OR2M4Q96R27 311 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 GSDMCQ9BYG8 508 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 FAM96AQ9H5X1 160 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 TREX1Q9NSU2 369 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 CFAP54Q96N23 3096 aa17.99■□□□□ 0.47
TRIM13-206ENST00000457662 ZNF106Q9H2Y7 1883 aaKnown RBP17.98■□□□□ 0.47
TRIM13-206ENST00000457662 TRBV5-4A0A0C4DH59 114 aa17.98■□□□□ 0.47
TRIM13-206ENST00000457662 CHUKO15111 745 aa17.98■□□□□ 0.47
TRIM13-206ENST00000457662 FFAR2O15552 330 aa17.98■□□□□ 0.47
TRIM13-206ENST00000457662 MTX2O75431 263 aa17.98■□□□□ 0.47
TRIM13-206ENST00000457662 RALBP11234 206 aa17.98■□□□□ 0.47
TRIM13-206ENST00000457662 CEACAM1P13688 526 aa17.98■□□□□ 0.47
TRIM13-206ENST00000457662 MSH3P20585 1137 aa17.98■□□□□ 0.47
TRIM13-206ENST00000457662 NMBRP28336 390 aa17.98■□□□□ 0.47
TRIM13-206ENST00000457662 CA5AP35218 305 aa17.98■□□□□ 0.47
TRIM13-206ENST00000457662 ID4P47928 161 aa17.98■□□□□ 0.47
TRIM13-206ENST00000457662 ILF3Q12906 894 aaKnown RBP eCLIP17.98■□□□□ 0.47
TRIM13-206ENST00000457662 CALCOCO2Q13137 446 aa17.98■□□□□ 0.47
TRIM13-206ENST00000457662 LRP8Q14114 963 aa17.98■□□□□ 0.47
TRIM13-206ENST00000457662 KHDC1Q4VXA5 237 aaKnown RBP17.98■□□□□ 0.47
TRIM13-206ENST00000457662 DUPD1Q68J44 220 aa17.98■□□□□ 0.47
TRIM13-206ENST00000457662 AFTPHQ6ULP2 937 aa17.98■□□□□ 0.47
TRIM13-206ENST00000457662 TAS2R42Q7RTR8 314 aa17.98■□□□□ 0.47
TRIM13-206ENST00000457662 TAF8Q7Z7C8 310 aa17.98■□□□□ 0.47
TRIM13-206ENST00000457662 PDIK1LQ8N165 341 aa17.98■□□□□ 0.47
TRIM13-206ENST00000457662 MPP5Q8N3R9 675 aa17.98■□□□□ 0.47
TRIM13-206ENST00000457662 MMGT1Q8N4V1 131 aa17.98■□□□□ 0.47
TRIM13-206ENST00000457662 DEFB124Q8NES8 71 aa17.98■□□□□ 0.47
TRIM13-206ENST00000457662 OR4L1Q8NH43 312 aa17.98■□□□□ 0.47
TRIM13-206ENST00000457662 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.98■□□□□ 0.47
TRIM13-206ENST00000457662 SIGLEC10Q96LC7 697 aa17.98■□□□□ 0.47
TRIM13-206ENST00000457662 WHRNQ9P202 907 aa17.98■□□□□ 0.47
TRIM13-206ENST00000457662 LRP4O75096 1905 aa17.98■□□□□ 0.47
TRIM13-206ENST00000457662 FAM237BA0A1B0GVD1 139 aa17.97■□□□□ 0.47
TRIM13-206ENST00000457662 DCDC2BA2VCK2 349 aa17.97■□□□□ 0.47
TRIM13-206ENST00000457662 TRIM38O00635 465 aa17.97■□□□□ 0.47
TRIM13-206ENST00000457662 ZNF500O60304 480 aaPredicted RBP17.97■□□□□ 0.47
TRIM13-206ENST00000457662 GOT2P00505 430 aaKnown RBP17.97■□□□□ 0.47
TRIM13-206ENST00000457662 AKT1P31749 480 aa17.97■□□□□ 0.47
TRIM13-206ENST00000457662 DNAJC21Q5F1R6 531 aaKnown RBP17.97■□□□□ 0.47
TRIM13-206ENST00000457662 LYPLAL1Q5VWZ2 237 aa17.97■□□□□ 0.47
TRIM13-206ENST00000457662 C8orf74Q6P047 294 aa17.97■□□□□ 0.47
TRIM13-206ENST00000457662 LRRTM4Q86VH4 590 aa17.97■□□□□ 0.47
TRIM13-206ENST00000457662 BAHD1Q8TBE0 780 aaPredicted RBP17.97■□□□□ 0.47
TRIM13-206ENST00000457662 MFSD3Q96ES6 412 aa17.97■□□□□ 0.47
TRIM13-206ENST00000457662 DCUN1D1Q96GG9 259 aa17.97■□□□□ 0.47
TRIM13-206ENST00000457662 ZNF514Q96K75 400 aaPredicted RBP17.97■□□□□ 0.47
TRIM13-206ENST00000457662 TTC1Q99614 292 aa17.97■□□□□ 0.47
TRIM13-206ENST00000457662 COPS8Q99627 209 aa17.97■□□□□ 0.47
TRIM13-206ENST00000457662 ZDHHC3Q9NYG2 299 aa17.97■□□□□ 0.47
TRIM13-206ENST00000457662 GPR34Q9UPC5 381 aa17.97■□□□□ 0.47
TRIM13-206ENST00000457662 MAD1L1Q9Y6D9 718 aa17.97■□□□□ 0.47
TRIM13-206ENST00000457662 CFAP99D6REC4 459 aa17.96■□□□□ 0.47
TRIM13-206ENST00000457662 KMOO15229 486 aa17.96■□□□□ 0.47
TRIM13-206ENST00000457662 SIGLEC6O43699 453 aa17.96■□□□□ 0.47
TRIM13-206ENST00000457662 LDOC1O95751 146 aaPredicted RBP17.96■□□□□ 0.47
TRIM13-206ENST00000457662 CELA2BP08218 269 aaPredicted RBP17.96■□□□□ 0.47
TRIM13-206ENST00000457662 PAMP19021 973 aa17.96■□□□□ 0.47
TRIM13-206ENST00000457662 ACRV1P26436 265 aa17.96■□□□□ 0.47
TRIM13-206ENST00000457662 FOXN2P32314 431 aa17.96■□□□□ 0.47
TRIM13-206ENST00000457662 PPARGP37231 505 aaPredicted RBP17.96■□□□□ 0.47
TRIM13-206ENST00000457662 CDKN1CP49918 316 aaPredicted RBP17.96■□□□□ 0.47
TRIM13-206ENST00000457662 DRG2P55039 364 aaKnown RBP17.96■□□□□ 0.47
TRIM13-206ENST00000457662 CTBSQ01459 385 aa17.96■□□□□ 0.47
TRIM13-206ENST00000457662 TCEA2Q15560 299 aa17.96■□□□□ 0.47
TRIM13-206ENST00000457662 TRIP6Q15654 476 aaKnown RBP17.96■□□□□ 0.47
TRIM13-206ENST00000457662 DEFB133Q30KQ1 61 aa17.96■□□□□ 0.47
TRIM13-206ENST00000457662 FASTKD1Q53R41 847 aaKnown RBP17.96■□□□□ 0.47
TRIM13-206ENST00000457662 ZCCHC8Q6NZY4 707 aaKnown RBP17.96■□□□□ 0.47
TRIM13-206ENST00000457662 CERS6Q6ZMG9 384 aa17.96■□□□□ 0.47
TRIM13-206ENST00000457662 CHST15Q7LFX5 561 aaPredicted RBP17.96■□□□□ 0.47
TRIM13-206ENST00000457662 TMEM135Q86UB9 458 aa17.96■□□□□ 0.47
TRIM13-206ENST00000457662 SERPINA9Q86WD7 417 aa17.96■□□□□ 0.47
TRIM13-206ENST00000457662 RASGEF1AQ8N9B8 481 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms