RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 CHRNA6Q15825 494 aa22.88■■□□□ 1.25
PTPRA-208ENST00000455631 SEPT7Q16181 437 aaKnown RBP22.88■■□□□ 1.25
PTPRA-208ENST00000455631 PLA2G4EQ3MJ16 856 aa22.88■■□□□ 1.25
PTPRA-208ENST00000455631 WDR24Q96S15 920 aa22.88■■□□□ 1.25
PTPRA-208ENST00000455631 TRIM7Q9C029 511 aa22.88■■□□□ 1.25
PTPRA-208ENST00000455631 PDE7BQ9NP56 450 aa22.88■■□□□ 1.25
PTPRA-208ENST00000455631 ARFGAP3Q9NP61 516 aa22.88■■□□□ 1.25
PTPRA-208ENST00000455631 MLXIPLQ9NP71 852 aa22.88■■□□□ 1.25
PTPRA-208ENST00000455631 SLAMF7Q9NQ25 335 aa22.88■■□□□ 1.25
PTPRA-208ENST00000455631 ATXN10Q9UBB4 475 aa22.88■■□□□ 1.25
PTPRA-208ENST00000455631 CHKBQ9Y259 395 aa22.88■■□□□ 1.25
PTPRA-208ENST00000455631 MTA2O94776 668 aa22.87■■□□□ 1.25
PTPRA-208ENST00000455631 ZNF8P17098 575 aaPredicted RBP22.87■■□□□ 1.25
PTPRA-208ENST00000455631 PTPN4P29074 926 aa22.87■■□□□ 1.25
PTPRA-208ENST00000455631 TUBB3Q13509 450 aa22.87■■□□□ 1.25
PTPRA-208ENST00000455631 IL10RAQ13651 578 aa22.87■■□□□ 1.25
PTPRA-208ENST00000455631 BECN1Q14457 450 aa22.87■■□□□ 1.25
PTPRA-208ENST00000455631 SMTNL2Q2TAL5 461 aa22.87■■□□□ 1.25
PTPRA-208ENST00000455631 HENMT1Q5T8I9 393 aaKnown RBP22.87■■□□□ 1.25
PTPRA-208ENST00000455631 PAPD7Q5XG87 772 aaKnown RBP22.87■■□□□ 1.25
PTPRA-208ENST00000455631 PLEKHA7Q6IQ23 1121 aa22.87■■□□□ 1.25
PTPRA-208ENST00000455631 IRGCQ6NXR0 463 aa22.87■■□□□ 1.25
PTPRA-208ENST00000455631 JMJD6Q6NYC1 403 aaPredicted RBP22.87■■□□□ 1.25
PTPRA-208ENST00000455631 FAM199XQ6PEV8 388 aaPredicted RBP22.87■■□□□ 1.25
PTPRA-208ENST00000455631 CRTC3Q6UUV7 619 aa22.87■■□□□ 1.25
PTPRA-208ENST00000455631 SYVN1Q86TM6 617 aa22.87■■□□□ 1.25
PTPRA-208ENST00000455631 AOPEPQ8N6M6 819 aa22.87■■□□□ 1.25
PTPRA-208ENST00000455631 KLHL6Q8WZ60 621 aa22.87■■□□□ 1.25
PTPRA-208ENST00000455631 GPR87Q9BY21 358 aa22.87■■□□□ 1.25
PTPRA-208ENST00000455631 POLR1EQ9GZS1 481 aaKnown RBP22.87■■□□□ 1.25
PTPRA-208ENST00000455631 ZNF624Q9P2J8 865 aaPredicted RBP22.87■■□□□ 1.25
PTPRA-208ENST00000455631 ERRFI1Q9UJM3 462 aaPredicted RBP22.87■■□□□ 1.25
PTPRA-208ENST00000455631 RARRES3Q9UL19 164 aa22.87■■□□□ 1.25
PTPRA-208ENST00000455631 ZNF451Q9Y4E5 1061 aa22.87■■□□□ 1.25
PTPRA-208ENST00000455631 C1orf232A0A0U1RR37 186 aa22.86■■□□□ 1.25
PTPRA-208ENST00000455631 PDZK1P1A8MUH7 402 aa22.86■■□□□ 1.25
PTPRA-208ENST00000455631 NELFEP18615 380 aaKnown RBP22.86■■□□□ 1.25
PTPRA-208ENST00000455631 TNFRSF8P28908 595 aa22.86■■□□□ 1.25
PTPRA-208ENST00000455631 SLC19A1P41440 591 aa22.86■■□□□ 1.25
PTPRA-208ENST00000455631 SPINT3P49223 89 aa22.86■■□□□ 1.25
PTPRA-208ENST00000455631 CLCNKAP51800 687 aa22.86■■□□□ 1.25
PTPRA-208ENST00000455631 RPS15P62841 145 aaKnown RBP22.86■■□□□ 1.25
PTPRA-208ENST00000455631 INSCQ1MX18 579 aa22.86■■□□□ 1.25
PTPRA-208ENST00000455631 TDRD12Q587J7 1177 aaKnown RBP22.86■■□□□ 1.25
PTPRA-208ENST00000455631 ZNF648Q5T619 568 aaPredicted RBP22.86■■□□□ 1.25
PTPRA-208ENST00000455631 PWWP2BQ6NUJ5 590 aa22.86■■□□□ 1.25
PTPRA-208ENST00000455631 TICAM1Q8IUC6 712 aa22.86■■□□□ 1.25
PTPRA-208ENST00000455631 RAVER1Q8IY67 606 aaKnown RBP22.86■■□□□ 1.25
PTPRA-208ENST00000455631 LPCAT1Q8NF37 534 aa22.86■■□□□ 1.25
PTPRA-208ENST00000455631 ZDHHC12Q96GR4 267 aa22.86■■□□□ 1.25
PTPRA-208ENST00000455631 TCTN2Q96GX1 697 aa22.86■■□□□ 1.25
PTPRA-208ENST00000455631 TDRD1Q9BXT4 1180 aaKnown RBP22.86■■□□□ 1.25
PTPRA-208ENST00000455631 MFRPQ9BY79 579 aa22.86■■□□□ 1.25
PTPRA-208ENST00000455631 OR2AG1Q9H205 316 aa22.86■■□□□ 1.25
PTPRA-208ENST00000455631 FAM83DQ9H4H8 585 aa22.86■■□□□ 1.25
PTPRA-208ENST00000455631 AKIRIN1Q9H9L7 192 aaPredicted RBP22.86■■□□□ 1.25
PTPRA-208ENST00000455631 PKD2L2Q9NZM6 624 aa22.86■■□□□ 1.25
PTPRA-208ENST00000455631 TTLL3Q9Y4R7 772 aa22.86■■□□□ 1.25
PTPRA-208ENST00000455631 TMEM191CA6NGB0 347 aa22.85■■□□□ 1.25
PTPRA-208ENST00000455631 DPM1O60762 260 aa22.85■■□□□ 1.25
PTPRA-208ENST00000455631 SERPINB6P35237 376 aa22.85■■□□□ 1.25
PTPRA-208ENST00000455631 DSC2Q02487 901 aa22.85■■□□□ 1.25
PTPRA-208ENST00000455631 DPYSL2Q16555 572 aa22.85■■□□□ 1.25
PTPRA-208ENST00000455631 POLNQ7Z5Q5 900 aa22.85■■□□□ 1.25
PTPRA-208ENST00000455631 Q8NA96 180 aa22.85■■□□□ 1.25
PTPRA-208ENST00000455631 HSPH1Q92598 858 aa22.85■■□□□ 1.25
PTPRA-208ENST00000455631 CSPG4P5Q96PW8 444 aa22.85■■□□□ 1.25
PTPRA-208ENST00000455631 CLSTN2Q9H4D0 955 aa22.85■■□□□ 1.25
PTPRA-208ENST00000455631 POT1Q9NUX5 634 aa22.85■■□□□ 1.25
PTPRA-208ENST00000455631 DNAJC16Q9Y2G8 782 aa22.85■■□□□ 1.25
PTPRA-208ENST00000455631 ADGRG1Q9Y653 693 aa22.85■■□□□ 1.25
PTPRA-208ENST00000455631 LDLRP01130 860 aa22.84■■□□□ 1.25
PTPRA-208ENST00000455631 PTGIRP43119 386 aa22.84■■□□□ 1.25
PTPRA-208ENST00000455631 KCNAB1Q14722 419 aa22.84■■□□□ 1.25
PTPRA-208ENST00000455631 TEX26Q8N6G2 289 aa22.84■■□□□ 1.25
PTPRA-208ENST00000455631 SIDT2Q8NBJ9 832 aaKnown RBP22.84■■□□□ 1.25
PTPRA-208ENST00000455631 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.84■■□□□ 1.25
PTPRA-208ENST00000455631 SRPK3Q9UPE1 567 aa22.84■■□□□ 1.25
PTPRA-208ENST00000455631 CENPEQ02224 2701 aa22.84■■□□□ 1.25
PTPRA-208ENST00000455631 DOPEY1Q5JWR5 2465 aa22.84■■□□□ 1.25
PTPRA-208ENST00000455631 CRYBG3Q68DQ2 2970 aa22.83■■□□□ 1.25
PTPRA-208ENST00000455631 ATP1A3P13637 1013 aa22.83■■□□□ 1.25
PTPRA-208ENST00000455631 FOLR1P15328 257 aa22.83■■□□□ 1.25
PTPRA-208ENST00000455631 CA4P22748 312 aa22.83■■□□□ 1.25
PTPRA-208ENST00000455631 VARSP26640 1264 aaKnown RBP22.83■■□□□ 1.25
PTPRA-208ENST00000455631 IL1R2P27930 398 aa22.83■■□□□ 1.25
PTPRA-208ENST00000455631 PPP1CAP62136 330 aa22.83■■□□□ 1.25
PTPRA-208ENST00000455631 GPR18Q14330 331 aa22.83■■□□□ 1.25
PTPRA-208ENST00000455631 IHHQ14623 411 aa22.83■■□□□ 1.25
PTPRA-208ENST00000455631 CDKAL1Q5VV42 579 aa22.83■■□□□ 1.25
PTPRA-208ENST00000455631 SLC6A19Q695T7 634 aa22.83■■□□□ 1.25
PTPRA-208ENST00000455631 PPP1R2P3Q6NXS1 205 aa22.83■■□□□ 1.25
PTPRA-208ENST00000455631 CCHCR1Q8TD31 782 aa22.83■■□□□ 1.25
PTPRA-208ENST00000455631 SLC23A2Q9UGH3 650 aa22.83■■□□□ 1.25
PTPRA-208ENST00000455631 G3BP2Q9UN86 482 aaKnown RBP22.83■■□□□ 1.25
PTPRA-208ENST00000455631 PCDHGB7Q9Y5F8 929 aa22.83■■□□□ 1.25
PTPRA-208ENST00000455631 CELSR2Q9HCU4 2923 aa22.82■■□□□ 1.24
PTPRA-208ENST00000455631 WIPF3A6NGB9 483 aa22.82■■□□□ 1.24
PTPRA-208ENST00000455631 OR52A4PA6NMU1 304 aa22.82■■□□□ 1.24
PTPRA-208ENST00000455631 PRLP01236 227 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms