RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 ARSDP51689 593 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 RPL38P63173 70 aaKnown RBP13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 GSTM4Q03013 218 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 SOX4Q06945 474 aaPredicted RBP13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 PTPRNQ16849 979 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 CYBRD1Q53TN4 286 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 RAVER1Q8IY67 606 aaKnown RBP13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 ALDH16A1Q8IZ83 802 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 MFSD2AQ8NA29 543 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 OR13C4Q8NGS5 318 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 TRPM4Q8TD43 1214 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 SEMA3CQ99985 751 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 ACTR8Q9H981 624 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 TAS2R13Q9NYV9 303 aa13.77□□□□□ -0.21
UBE2D3-210ENST00000453744 AKT1P31749 480 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 HPCAL1P37235 193 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 AGTR2P50052 363 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 DNAJB13P59910 316 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 KCNAB2Q13303 367 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 TRIM60Q495X7 471 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 LARP4Q71RC2 724 aaKnown RBP eCLIP13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 MTMR14Q8NCE2 650 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 CNIH3Q8TBE1 160 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 NUDT8Q8WV74 236 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 C12orf42Q96LP6 360 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 CYP2S1Q96SQ9 504 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 SYTL2Q9HCH5 934 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 CNGB3Q9NQW8 809 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 TMEM9Q9P0T7 183 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 FAM8A1Q9UBU6 413 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 TAF4O00268 1085 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 MAP2K4P45985 399 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 ACADVLP49748 655 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 EFEMP1Q12805 493 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 DCLRE1AQ6PJP8 1040 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 PELI3Q8N2H9 469 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 HMGCLL1Q8TB92 370 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 ZFP90Q8TF47 636 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 FCRL5Q96RD9 977 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 BPIFA1Q9NP55 256 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 ARL5AQ9Y689 179 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 LOXHD1Q8IVV2 1947 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 COL5A3P25940 1745 aaPredicted RBP13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 A0A1W2PP18 115 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 PFDN6O15212 129 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 POMCP01189 267 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 DCKP27707 260 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 PCSK1P29120 753 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 MADCAM1Q13477 382 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 DMC1Q14565 340 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 PAQR3Q6TCH7 311 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 HORMAD1Q86X24 394 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 PTERQ96BW5 349 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 SLC47A1Q96FL8 570 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 EIF2B4Q9UI10 523 aaKnown RBP13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 SNX8Q9Y5X2 465 aa13.76□□□□□ -0.21
UBE2D3-210ENST00000453744 TYW5A2RUC4 315 aaKnown RBP13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 RECQL5O94762 991 aaPredicted RBP13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 PRSS56P0CW18 603 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 POLR2IP36954 125 aaKnown RBP13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 TMBIM6P55061 237 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 LCP2Q13094 533 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 SPATA2LQ8IUW3 424 aaPredicted RBP13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 OR8H2Q8N162 312 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 OR56A4Q8NGH8 313 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 GPR78Q96P69 363 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 ZNF347Q96SE7 839 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 DPY30Q9C005 99 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 CATSPERZQ9NTU4 200 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 MOXD2PA6NHM9 499 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 CDC7O00311 574 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 MATN3O15232 486 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 GOT2P00505 430 aaKnown RBP13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 CNPP09543 421 aaKnown RBP13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 CCNCP24863 283 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 RAB15P59190 212 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 SLC10A7Q0GE19 358 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 TRAF3Q13114 568 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 MAPKAPK3Q16644 382 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 COLEC12Q5KU26 742 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 NOL9Q5SY16 702 aaKnown RBP13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 LCN8Q6JVE9 175 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 ISCA2Q86U28 154 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 AKAP14Q86UN6 197 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 P2RY8Q86VZ1 359 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 GATAD2AQ86YP4 633 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 CLIP4Q8N3C7 705 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 PNPT1Q8TCS8 783 aaKnown RBP13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 MYLPFQ96A32 169 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 ISL2Q96A47 359 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 TRIM54Q9BYV2 358 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 EHD1Q9H4M9 534 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 TXNRD2Q9NNW7 524 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 LATS2Q9NRM7 1088 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 ZNHIT2Q9UHR6 403 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 PKP3Q9Y446 797 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 TMEM221A6NGB7 291 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 DIRAS1O95057 198 aa13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 PRDX3P30048 256 aaKnown RBP13.75□□□□□ -0.21
UBE2D3-210ENST00000453744 ALDH3A2P51648 485 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms