RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 GCATO75600 419 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 SERPINA3P01011 423 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 CSF2P04141 144 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 YES1P07947 543 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 RHOP08100 348 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 CHRM2P08172 466 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 CHRM4P08173 479 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 UQCRFS1P1P0C7P4 283 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 EBLN1P0CF75 366 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 CALCBP10092 127 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 HPGDP15428 266 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 HK1P19367 917 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 FUT1P19526 365 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 CYP2F1P24903 491 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 PKLRP30613 574 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 CA8P35219 290 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 NDUFV1P49821 464 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 SERPINH1P50454 418 aaKnown RBP4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 SUOXP51687 545 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 MVDP53602 400 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 SRP54P61011 504 aaKnown RBP4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 RPL15P61313 204 aaKnown RBP4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 CSNK2BP67870 215 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 TPM4P67936 248 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 NOP14P78316 857 aaKnown RBP4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 NUCB2P80303 420 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 SARNPP82979 210 aaKnown RBP4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 GAD2Q05329 585 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 ITIH3Q06033 890 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 CDK18Q07002 472 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 DLX2Q07687 328 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 LCP2Q13094 533 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 BYSLQ13895 437 aaKnown RBP4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 COTL1Q14019 142 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 LARS2Q15031 903 aaKnown RBP4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 NAB2Q15742 525 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 TPD52L1Q16890 204 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 SMTNL2Q2TAL5 461 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 PTCHD3Q3KNS1 767 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 SLC36A3Q495N2 470 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 CBWD6Q4V339 395 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 EPC2Q52LR7 807 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 CBWD3Q5JTY5 395 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 GCNT6Q5T4J0 391 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 RNASEH2BQ5TBB1 312 aaKnown RBP4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 LCE5AQ5TCM9 118 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 WBP2NLQ6ICG8 309 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 KCNV1Q6PIU1 500 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 BRAT1Q6PJG6 821 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 LAYNQ6UX15 382 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 RANBP10Q6VN20 620 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 NHLRC1Q6VVB1 395 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 CFAP77Q6ZQR2 320 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 ZNF572Q7Z3I7 529 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 ADAMTSL2Q86TH1 951 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 EXOC3L1Q86VI1 746 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 CD302Q8IX05 232 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 C4orf19Q8IY42 314 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 TP53I13Q8NBR0 393 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 SLC17A8Q8NDX2 589 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 STEAP2Q8NFT2 490 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 TRIM58Q8NG06 486 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 OR10T2Q8NGX3 314 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 SUN3Q8TAQ9 357 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 DDI1Q8WTU0 396 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 CKAP2Q8WWK9 683 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 DPF1Q92782 380 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 TMIGD2Q96BF3 282 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 ZBTB8AQ96BR9 441 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 ARSGQ96EG1 525 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 PGM2Q96G03 612 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 VCPIP1Q96JH7 1222 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 COQ10AQ96MF6 247 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 NECTIN4Q96NY8 510 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 KLHL5Q96PQ7 755 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 ASCL2Q99929 193 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 NPLQ9BXD5 320 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 NUAK2Q9H093 628 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 EPC1Q9H2F5 836 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 NOL11Q9H8H0 719 aaKnown RBP4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 MINDY3Q9H8M7 445 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 EVA1AQ9H8M9 152 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 KIF9Q9HAQ2 790 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 GLOD4Q9HC38 313 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 RANGRFQ9HD47 186 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 LZTFL1Q9NQ48 299 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 TRNAU1APQ9NX07 287 aaKnown RBP4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 CHMP5Q9NZZ3 219 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 THEGQ9P2T0 379 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 CNOT8Q9UFF9 292 aaKnown RBP4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 MTRF1LQ9UGC7 380 aaKnown RBP4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 TSPAN16Q9UKR8 245 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 A4GNTQ9UNA3 340 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 PLA2G4CQ9UP65 541 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 KCNK6Q9Y257 313 aa4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 UBE2J1Q9Y385 318 aaPredicted RBP4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 MRPS2Q9Y399 296 aaKnown RBP4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.41□□□□□ -1.7
HMGB3P21-201ENST00000452483 A0A1B0GTL3 188 aa4.4□□□□□ -1.71
HMGB3P21-201ENST00000452483 GXYLT2A0PJZ3 443 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms