RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 XIAPP98170 497 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 CDK16Q00536 496 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 CTBSQ01459 385 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 ILF3Q12906 894 aaKnown RBP eCLIP19.73■□□□□ 0.75
COL9A3-202ENST00000452372 ADGRG6Q86SQ4 1221 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 NRROSQ86YC3 692 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 GALNT13Q8IUC8 556 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 ZNF398Q8TD17 642 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 GRK7Q8WTQ7 553 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 GLMNQ92990 594 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 CAPZA3Q96KX2 299 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 OR2M4Q96R27 311 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 GSDMCQ9BYG8 508 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 SUDS3Q9H7L9 328 aaPredicted RBP19.73■□□□□ 0.75
COL9A3-202ENST00000452372 UGT1A7Q9HAW7 530 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 UGT1A10Q9HAW8 530 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 UGT1A8Q9HAW9 530 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 ARFGAP3Q9NP61 516 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 RNF14Q9UBS8 474 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 ZNHIT2Q9UHR6 403 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 FKBPLQ9UIM3 349 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 ST14Q9Y5Y6 855 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 U3KQA8 63 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 BAHCC1Q9P281 2608 aa19.73■□□□□ 0.75
COL9A3-202ENST00000452372 SMG1Q96Q15 3661 aaKnown RBP19.72■□□□□ 0.75
COL9A3-202ENST00000452372 MROH6A6NGR9 719 aa19.72■□□□□ 0.75
COL9A3-202ENST00000452372 VEGFDO43915 354 aa19.72■□□□□ 0.75
COL9A3-202ENST00000452372 TPSB2P20231 275 aa19.72■□□□□ 0.75
COL9A3-202ENST00000452372 DUSP3P51452 185 aaPredicted RBP19.72■□□□□ 0.75
COL9A3-202ENST00000452372 GPS1Q13098 491 aa19.72■□□□□ 0.75
COL9A3-202ENST00000452372 ILKQ13418 452 aa19.72■□□□□ 0.75
COL9A3-202ENST00000452372 TPSAB1Q15661 275 aa19.72■□□□□ 0.75
COL9A3-202ENST00000452372 KCTD19Q17RG1 926 aaPredicted RBP19.72■□□□□ 0.75
COL9A3-202ENST00000452372 CERCAMQ5T4B2 595 aa19.72■□□□□ 0.75
COL9A3-202ENST00000452372 ZNF648Q5T619 568 aaPredicted RBP19.72■□□□□ 0.75
COL9A3-202ENST00000452372 OGFOD3Q6PK18 319 aa19.72■□□□□ 0.75
COL9A3-202ENST00000452372 FAM46DQ8NEK8 389 aa19.72■□□□□ 0.75
COL9A3-202ENST00000452372 STYXQ8WUJ0 223 aa19.72■□□□□ 0.75
COL9A3-202ENST00000452372 OR2AG1Q9H205 316 aa19.72■□□□□ 0.75
COL9A3-202ENST00000452372 EVA1BQ9NVM1 165 aa19.72■□□□□ 0.75
COL9A3-202ENST00000452372 NLE1Q9NVX2 485 aaPredicted RBP19.72■□□□□ 0.75
COL9A3-202ENST00000452372 SMOXQ9NWM0 555 aa19.72■□□□□ 0.75
COL9A3-202ENST00000452372 GPR34Q9UPC5 381 aa19.72■□□□□ 0.75
COL9A3-202ENST00000452372 PCYT1BQ9Y5K3 369 aaPredicted RBP19.72■□□□□ 0.75
COL9A3-202ENST00000452372 ZFC3H1O60293 1989 aaKnown RBP19.72■□□□□ 0.75
COL9A3-202ENST00000452372 AGAP14A8MT82 685 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 H7C0S8 307 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 AP3B1O00203 1094 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 CHUKO15111 745 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 GRID2O43424 1007 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 SRP72O76094 671 aaKnown RBP19.71■□□□□ 0.75
COL9A3-202ENST00000452372 PRAMEF1O95521 474 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 CDK4P11802 303 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 MYF5P13349 255 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 ZNF8P17098 575 aaPredicted RBP19.71■□□□□ 0.75
COL9A3-202ENST00000452372 ADRA1DP25100 572 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 PSMA3P25788 255 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 MAGEA6P43360 314 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 RPIAP49247 311 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 VPS41P49754 854 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 TMPRSS15P98073 1019 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 PEX6Q13608 980 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 LAMB3Q13751 1172 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 LRP8Q14114 963 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 SEPT6Q14141 434 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 COL28A1Q2UY09 1125 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 LDLRAP1Q5SW96 308 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 SLC35F3Q8IY50 421 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 HNRNPLLQ8WVV9 542 aaKnown RBP19.71■□□□□ 0.75
COL9A3-202ENST00000452372 CDKN2AIPNLQ96HQ2 116 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 DNAJC1Q96KC8 554 aaKnown RBP19.71■□□□□ 0.75
COL9A3-202ENST00000452372 RANBP9Q96S59 729 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 DDX47Q9H0S4 455 aaKnown RBP19.71■□□□□ 0.75
COL9A3-202ENST00000452372 ASB8Q9H765 288 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 PCYOX1Q9UHG3 505 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 PLEKHM1Q9Y4G2 1056 aa19.71■□□□□ 0.75
COL9A3-202ENST00000452372 BPTFQ12830 3046 aa19.7■□□□□ 0.74
COL9A3-202ENST00000452372 HEATR9A2RTY3 570 aa19.7■□□□□ 0.74
COL9A3-202ENST00000452372 CDK14O94921 469 aa19.7■□□□□ 0.74
COL9A3-202ENST00000452372 JUPP14923 745 aa19.7■□□□□ 0.74
COL9A3-202ENST00000452372 AK4P27144 223 aaPredicted RBP19.7■□□□□ 0.74
COL9A3-202ENST00000452372 CASQ1P31415 396 aa19.7■□□□□ 0.74
COL9A3-202ENST00000452372 CA5AP35218 305 aa19.7■□□□□ 0.74
COL9A3-202ENST00000452372 PAFAH1B1P43034 410 aa19.7■□□□□ 0.74
COL9A3-202ENST00000452372 TMEM115Q12893 351 aaPredicted RBP19.7■□□□□ 0.74
COL9A3-202ENST00000452372 TARDBPQ13148 414 aaKnown RBP eCLIP19.7■□□□□ 0.74
COL9A3-202ENST00000452372 NFATC2Q13469 925 aa19.7■□□□□ 0.74
COL9A3-202ENST00000452372 NR0B2Q15466 257 aa19.7■□□□□ 0.74
COL9A3-202ENST00000452372 SKIDA1Q1XH10 827 aa19.7■□□□□ 0.74
COL9A3-202ENST00000452372 KHDC1Q4VXA5 237 aaKnown RBP19.7■□□□□ 0.74
COL9A3-202ENST00000452372 GPRC6AQ5T6X5 926 aa19.7■□□□□ 0.74
COL9A3-202ENST00000452372 ARL10Q8N8L6 244 aa19.7■□□□□ 0.74
COL9A3-202ENST00000452372 DDHD1Q8NEL9 900 aa19.7■□□□□ 0.74
COL9A3-202ENST00000452372 GDAP1Q8TB36 358 aa19.7■□□□□ 0.74
COL9A3-202ENST00000452372 SLCO2A1Q92959 643 aa19.7■□□□□ 0.74
COL9A3-202ENST00000452372 DPEP2Q9H4A9 486 aa19.7■□□□□ 0.74
COL9A3-202ENST00000452372 SPATS2LQ9NUQ6 558 aaKnown RBP19.7■□□□□ 0.74
COL9A3-202ENST00000452372 TAAR2Q9P1P5 351 aa19.7■□□□□ 0.74
COL9A3-202ENST00000452372 GULP1Q9UBP9 304 aa19.7■□□□□ 0.74
COL9A3-202ENST00000452372 RIMKLBQ9ULI2 386 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms