RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 KLF15Q9UIH9 416 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 CRLS1Q9UJA2 301 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 RPS6KL1Q9Y6S9 549 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 PLXNB3Q9ULL4 1909 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 TMEM131Q92545 1883 aa12.91□□□□□ -0.34
VPS33A-202ENST00000451053 RALGAPA1Q6GYQ0 2036 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 A0A087WUV0 522 aaPredicted RBP12.9□□□□□ -0.34
VPS33A-202ENST00000451053 TRBV5-4A0A0C4DH59 114 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 AGAP14A8MT82 685 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 SCAMP1O15126 338 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 RIPK2O43353 540 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 ATP8B1O43520 1251 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 GFRA3O60609 400 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 USP1O94782 785 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 VAPBO95292 243 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 ACSL3O95573 720 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 ASMTLO95671 621 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 FUCA1P04066 466 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 CEACAM5P06731 702 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 SYPP08247 313 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 KELP23276 732 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 PI4KAP42356 2102 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 ARCN1P48444 511 aaKnown RBP12.9□□□□□ -0.34
VPS33A-202ENST00000451053 SRP54P61011 504 aaKnown RBP12.9□□□□□ -0.34
VPS33A-202ENST00000451053 SHBQ15464 509 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 KYNUQ16719 465 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 ZNF423Q2M1K9 1284 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 ALG11Q2TAA5 492 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 SPANXN3Q5MJ09 141 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 GPRC6AQ5T6X5 926 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 PRR23CQ6ZRP0 262 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 TAS2R42Q7RTR8 314 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 ADGRG6Q86SQ4 1221 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 RBFAQ8N0V3 343 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 NXPE1Q8N323 547 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 DDHD1Q8NEL9 900 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 OR4L1Q8NH43 312 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 GDAP1Q8TB36 358 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 TSACCQ96A04 125 aaPredicted RBP12.9□□□□□ -0.34
VPS33A-202ENST00000451053 ULK4Q96C45 1275 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 CFAP36Q96G28 342 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 PKNOX2Q96KN3 472 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 CCDC77Q9BR77 488 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 ZDHHC5Q9C0B5 715 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 OR2AG1Q9H205 316 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 TCEAL2Q9H3H9 227 aaPredicted RBP12.9□□□□□ -0.34
VPS33A-202ENST00000451053 GAREM1Q9H706 876 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 VPS37BQ9H9H4 285 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 ERVMER34-1Q9H9K5 563 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 DNAJC28Q9NX36 388 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 IL1RAPL1Q9NZN1 696 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 MARCH4Q9P2E8 410 aaPredicted RBP12.9□□□□□ -0.34
VPS33A-202ENST00000451053 ATXN10Q9UBB4 475 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 KLQ9UEF7 1012 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 SLC17A4Q9Y2C5 497 aa12.9□□□□□ -0.34
VPS33A-202ENST00000451053 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.9□□□□□ -0.34
VPS33A-202ENST00000451053 LRP4O75096 1905 aa12.9□□□□□ -0.35
VPS33A-202ENST00000451053 PRSS38A1L453 326 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 GOLGA8KD6RF30 607 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 GOLGA8TH3BQL2 631 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 TNFRSF10CO14798 259 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 CER1O95813 267 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 CSF2P04141 144 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 IVLP07476 585 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 NUDT17P0C025 328 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 NME1P15531 152 aaKnown RBP12.89□□□□□ -0.35
VPS33A-202ENST00000451053 PAMP19021 973 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 ACRV1P26436 265 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 STX2P32856 288 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 EIF3BP55884 814 aaKnown RBP12.89□□□□□ -0.35
VPS33A-202ENST00000451053 IL9RQ01113 521 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 PPARDQ03181 441 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 FRG1Q14331 258 aaKnown RBP12.89□□□□□ -0.35
VPS33A-202ENST00000451053 SEMA3AQ14563 771 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 CRYMQ14894 314 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 DBN1Q16643 649 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 GPR33Q49SQ1 333 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 LDLRAP1Q5SW96 308 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 STEAP4Q687X5 459 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 IL27RAQ6UWB1 636 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 UNC5AQ6ZN44 842 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 C3orf62Q6ZUJ4 267 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 MARK2Q7KZI7 788 aaKnown RBP12.89□□□□□ -0.35
VPS33A-202ENST00000451053 RD3Q7Z3Z2 195 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 CROCCP2Q86T23 111 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 SERPINA9Q86WD7 417 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 HID1Q8IV36 788 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 PHACTR4Q8IZ21 702 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 UNC5BQ8IZJ1 945 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 MINDY1Q8N5J2 469 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.89□□□□□ -0.35
VPS33A-202ENST00000451053 GSDMBQ8TAX9 411 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 NAT14Q8WUY8 206 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 SGSM3Q96HU1 749 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 RUFY1Q96T51 708 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 ELF4Q99607 663 aaPredicted RBP12.89□□□□□ -0.35
VPS33A-202ENST00000451053 EDEM2Q9BV94 578 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 LRRC4CQ9HCJ2 640 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 TRIM39Q9HCM9 518 aa12.89□□□□□ -0.35
VPS33A-202ENST00000451053 CYP4F12Q9HCS2 524 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms