RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 PARP15Q460N3 678 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 FGD3Q5JSP0 725 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 TXNDC11Q6PKC3 985 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 PRR23BQ6ZRT6 265 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 RIMKLAQ8IXN7 391 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 KLHL23Q8NBE8 558 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 FUBP1Q96AE4 644 aaKnown RBP18.94■□□□□ 0.62
SDCBP-204ENST00000447182 VPS50Q96JG6 964 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 TMEM74Q96NL1 305 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 CHID1Q9BWS9 393 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 LRRC3Q9BY71 257 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 GMIPQ9P107 970 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 IFT80Q9P2H3 777 aaPredicted RBP18.94■□□□□ 0.62
SDCBP-204ENST00000447182 ZNF225Q9UK10 706 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 PLXNA3P51805 1871 aa18.94■□□□□ 0.62
SDCBP-204ENST00000447182 MOXD2PA6NHM9 499 aa18.93■□□□□ 0.62
SDCBP-204ENST00000447182 SNX2O60749 519 aa18.93■□□□□ 0.62
SDCBP-204ENST00000447182 RHOBTB1O94844 696 aa18.93■□□□□ 0.62
SDCBP-204ENST00000447182 PRSS23O95084 383 aa18.93■□□□□ 0.62
SDCBP-204ENST00000447182 CDH1P12830 882 aa18.93■□□□□ 0.62
SDCBP-204ENST00000447182 TUSC3Q13454 348 aa18.93■□□□□ 0.62
SDCBP-204ENST00000447182 POLD3Q15054 466 aaPredicted RBP18.93■□□□□ 0.62
SDCBP-204ENST00000447182 FUT11Q495W5 492 aa18.93■□□□□ 0.62
SDCBP-204ENST00000447182 ACBD5Q5T8D3 534 aaPredicted RBP18.93■□□□□ 0.62
SDCBP-204ENST00000447182 ZNF773Q6PK81 442 aa18.93■□□□□ 0.62
SDCBP-204ENST00000447182 SYVN1Q86TM6 617 aa18.93■□□□□ 0.62
SDCBP-204ENST00000447182 DPP10Q8N608 796 aa18.93■□□□□ 0.62
SDCBP-204ENST00000447182 ATP6V0D2Q8N8Y2 350 aa18.93■□□□□ 0.62
SDCBP-204ENST00000447182 OR13F1Q8NGS4 319 aa18.93■□□□□ 0.62
SDCBP-204ENST00000447182 CDKN2AIPNLQ96HQ2 116 aa18.93■□□□□ 0.62
SDCBP-204ENST00000447182 RPL10LQ96L21 214 aaKnown RBP18.93■□□□□ 0.62
SDCBP-204ENST00000447182 UROC1Q96N76 676 aa18.93■□□□□ 0.62
SDCBP-204ENST00000447182 SLAMF8Q9P0V8 285 aa18.93■□□□□ 0.62
SDCBP-204ENST00000447182 PCTPQ9UKL6 214 aa18.93■□□□□ 0.62
SDCBP-204ENST00000447182 IKZF3Q9UKT9 509 aa18.93■□□□□ 0.62
SDCBP-204ENST00000447182 TRPM7Q96QT4 1865 aa18.93■□□□□ 0.62
SDCBP-204ENST00000447182 DOCK3Q8IZD9 2030 aa18.93■□□□□ 0.62
SDCBP-204ENST00000447182 DRGXA6NNA5 263 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 H0Y858 1186 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 GPR182O15218 404 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 RAMP2O60895 175 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 TULP3O75386 442 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 SOAT2O75908 522 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 ALBP02768 609 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 ZNF12P17014 697 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 TMBIM6P55061 237 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 TSNQ15631 228 aaKnown RBP18.92■□□□□ 0.62
SDCBP-204ENST00000447182 ANKDD1AQ495B1 522 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 FBXL22Q6P050 247 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 TBPL2Q6SJ96 375 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 HID1Q8IV36 788 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 PDPRQ8NCN5 879 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 GIPC3Q8TF64 312 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 SNRNP27Q8WVK2 155 aaKnown RBP18.92■□□□□ 0.62
SDCBP-204ENST00000447182 IGSF8Q969P0 613 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 BTN2A3PQ96KV6 586 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 PAIP1Q9H074 479 aaKnown RBP18.92■□□□□ 0.62
SDCBP-204ENST00000447182 TLR9Q9NR96 1032 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 INTS7Q9NVH2 962 aaKnown RBP18.92■□□□□ 0.62
SDCBP-204ENST00000447182 SUN2Q9UH99 717 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 MAGEL2Q9UJ55 1249 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 PCDHB3Q9Y5E6 796 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 GJB3O75712 270 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 PRDX3P30048 256 aaKnown RBP18.92■□□□□ 0.62
SDCBP-204ENST00000447182 MOGQ16653 247 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 PYCR3Q53H96 274 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 ALG1LQ6GMV1 187 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 SCN4BQ8IWT1 228 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 CPNE9Q8IYJ1 553 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 NTN4Q9HB63 628 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 NLE1Q9NVX2 485 aaPredicted RBP18.92■□□□□ 0.62
SDCBP-204ENST00000447182 PCDHGA11Q9Y5H2 935 aa18.92■□□□□ 0.62
SDCBP-204ENST00000447182 IQCA1LA6NCM1 817 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 MUSKO15146 869 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 ITGB1P05556 798 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 CTSHP09668 335 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 MBL2P11226 248 aaPredicted RBP18.91■□□□□ 0.62
SDCBP-204ENST00000447182 IL12AP29459 219 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 YBEYP58557 167 aaPredicted RBP18.91■□□□□ 0.62
SDCBP-204ENST00000447182 YWHAHQ04917 246 aaPredicted RBP18.91■□□□□ 0.62
SDCBP-204ENST00000447182 TUBA3CQ13748 450 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 GALNT3Q14435 633 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 PLCL1Q15111 1095 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 ANKRD26P1Q6NSI1 321 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 ZFAND4Q86XD8 727 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 NKAPQ8N5F7 415 aaKnown RBP18.91■□□□□ 0.62
SDCBP-204ENST00000447182 OR2T11Q8NH01 316 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 PROKR1Q8TCW9 393 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 NSMCE2Q96MF7 247 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 SEPHS2Q99611 448 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 NAA50Q9GZZ1 169 aaKnown RBP18.91■□□□□ 0.62
SDCBP-204ENST00000447182 FBXO44Q9H4M3 255 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 SOX17Q9H6I2 414 aaPredicted RBP18.91■□□□□ 0.62
SDCBP-204ENST00000447182 PALMDQ9NP74 551 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 RIC8BQ9NVN3 520 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 FAM50BQ9Y247 325 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 UBA6A0AVT1 1052 aaPredicted RBP18.91■□□□□ 0.62
SDCBP-204ENST00000447182 CDC7O00311 574 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 UPK1AO00322 258 aa18.91■□□□□ 0.62
SDCBP-204ENST00000447182 PRAMEF11O60813 436 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms