RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 TAGLNQ01995 201 aaKnown RBP7.83□□□□□ -1.16
SMG1-202ENST00000446231 IL18Q14116 193 aa7.83□□□□□ -1.16
SMG1-202ENST00000446231 Q3C1V9 767 aa7.83□□□□□ -1.16
SMG1-202ENST00000446231 ZNF767PQ75MW2 155 aa7.83□□□□□ -1.16
SMG1-202ENST00000446231 MSANTD3Q96H12 275 aa7.83□□□□□ -1.16
SMG1-202ENST00000446231 MED30Q96HR3 178 aa7.83□□□□□ -1.16
SMG1-202ENST00000446231 C1QTNF1Q9BXJ1 281 aa7.83□□□□□ -1.16
SMG1-202ENST00000446231 ANKRD60Q9BZ19 345 aa7.83□□□□□ -1.16
SMG1-202ENST00000446231 NR2E3Q9Y5X4 410 aa7.83□□□□□ -1.16
SMG1-202ENST00000446231 IL2P60568 153 aa7.83□□□□□ -1.16
SMG1-202ENST00000446231 CLEC6AQ6EIG7 209 aa7.83□□□□□ -1.16
SMG1-202ENST00000446231 USP30Q70CQ3 517 aa7.83□□□□□ -1.16
SMG1-202ENST00000446231 ADGRF2Q8IZF7 708 aa7.83□□□□□ -1.16
SMG1-202ENST00000446231 PTCD2Q8WV60 388 aaKnown RBP7.83□□□□□ -1.16
SMG1-202ENST00000446231 CLPBQ9H078 707 aa7.83□□□□□ -1.16
SMG1-202ENST00000446231 NMRK2Q9NPI5 230 aa7.83□□□□□ -1.16
SMG1-202ENST00000446231 GUCA1CO95843 209 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 TCF3P15923 654 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 GOT1P17174 413 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 ITGA2P17301 1181 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 PCSK1P29120 753 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 AMHR2Q16671 573 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 TTC29Q8NA56 475 aaPredicted RBP7.82□□□□□ -1.16
SMG1-202ENST00000446231 OR13J1Q8NGT2 312 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 NKIRAS2Q9NYR9 191 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 NKRFO15226 690 aaKnown RBP eCLIP7.82□□□□□ -1.161e-7■■□□□ 13.5
SMG1-202ENST00000446231 SMIM18P0DKX4 95 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 MATN1P21941 496 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 ALDH6A1Q02252 535 aaKnown RBP7.82□□□□□ -1.16
SMG1-202ENST00000446231 HKDC1Q2TB90 917 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 NLGN1Q8N2Q7 840 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 MPP5Q8N3R9 675 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 P2RY11Q96G91 374 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 AP5M1Q9H0R1 490 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 PPP1R11O60927 126 aaPredicted RBP7.82□□□□□ -1.16
SMG1-202ENST00000446231 AP2A1O95782 977 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 HOXD11P31277 338 aaPredicted RBP7.82□□□□□ -1.16
SMG1-202ENST00000446231 DNAJB13P59910 316 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 BORCS6Q96GS4 357 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 LRRC3Q9BY71 257 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 SH3BP4Q9P0V3 963 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 POU2F3Q9UKI9 436 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 CEP170BQ9Y4F5 1589 aaPredicted RBP7.82□□□□□ -1.16
SMG1-202ENST00000446231 SLIT1O75093 1534 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 OR14I1A6ND48 311 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 ITGALP20701 1170 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 RIPPLY1Q0D2K3 151 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 MKRN2Q9H000 416 aaKnown RBP7.82□□□□□ -1.16
SMG1-202ENST00000446231 NFKBIL1Q9UBC1 381 aaPredicted RBP7.82□□□□□ -1.16
SMG1-202ENST00000446231 XPNPEP2O43895 674 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 MPZL2O60487 215 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 LIMK2P53671 638 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 LCP2Q13094 533 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 MED22Q15528 200 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 MRPL48Q96GC5 212 aaKnown RBP7.82□□□□□ -1.16
SMG1-202ENST00000446231 ZNF597Q96LX8 424 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 NXF3Q9H4D5 531 aaKnown RBP7.82□□□□□ -1.16
SMG1-202ENST00000446231 VRTNQ9H8Y1 702 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 CD93Q9NPY3 652 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 FAM109AQ8N4B1 249 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 SLC2A14Q8TDB8 520 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 ZFP90Q8TF47 636 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 SLC45A3Q96JT2 553 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 CHURC1-FNTBB4DL54 471 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 ETV4P43268 484 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 PTSQ03393 145 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 LSM14AQ8ND56 463 aaKnown RBP7.82□□□□□ -1.16
SMG1-202ENST00000446231 JOSD2Q8TAC2 188 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 ASIC4Q96FT7 647 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 QPCTLQ9NXS2 382 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 MROH1Q8NDA8 1641 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 SPIBQ01892 262 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 BCL7BQ9BQE9 202 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 AGPAT4Q9NRZ5 378 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 TSPAN16Q9UKR8 245 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 CD40LGP29965 261 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 SOAT1P35610 550 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 DDX39BQ13838 428 aaKnown RBP7.82□□□□□ -1.16
SMG1-202ENST00000446231 RAP1GAP2Q684P5 730 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 LRRC66Q68CR7 880 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 UBE2J2Q8N2K1 259 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 SLA2Q9H6Q3 261 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 OLAHQ9NV23 265 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 IL37Q9NZH6 218 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 TESMINQ9Y4I5 508 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 MYO5CQ9NQX4 1742 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 ACKR2O00590 384 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 CDHR3Q6ZTQ4 885 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 U3KQV3 271 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 SHROOM2Q13796 1616 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 AQP9O43315 295 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 SUZ12Q15022 739 aaKnown RBP7.82□□□□□ -1.16
SMG1-202ENST00000446231 NDUFAF6Q330K2 333 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 OXA1LQ15070 435 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 AGAP7PQ5VUJ5 663 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 PNCKQ6P2M8 343 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 DET1Q7L5Y6 550 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 SLITRK4Q8IW52 837 aa7.82□□□□□ -1.16
SMG1-202ENST00000446231 SNRNP25Q9BV90 132 aaKnown RBP7.82□□□□□ -1.16
SMG1-202ENST00000446231 ST6GALNAC4Q9H4F1 302 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms