RNA–Protein interactions for RNA: ENST00000442421.5

TRIM13-205, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-205ENST00000442421 PPP1R2P3Q6NXS1 205 aa12.62□□□□□ -0.39
TRIM13-205ENST00000442421 APLFQ8IW19 511 aaPredicted RBP12.62□□□□□ -0.39
TRIM13-205ENST00000442421 TRIM48Q8IWZ4 208 aa12.62□□□□□ -0.39
TRIM13-205ENST00000442421 AVL9Q8NBF6 648 aa12.62□□□□□ -0.39
TRIM13-205ENST00000442421 LPCAT1Q8NF37 534 aa12.62□□□□□ -0.39
TRIM13-205ENST00000442421 CT55Q8WUE5 264 aa12.62□□□□□ -0.39
TRIM13-205ENST00000442421 RSC1A1Q92681 617 aa12.62□□□□□ -0.39
TRIM13-205ENST00000442421 RUFY1Q96T51 708 aa12.62□□□□□ -0.39
TRIM13-205ENST00000442421 OR2AG1Q9H205 316 aa12.62□□□□□ -0.39
TRIM13-205ENST00000442421 CARD9Q9H257 536 aa12.62□□□□□ -0.39
TRIM13-205ENST00000442421 FAM83DQ9H4H8 585 aa12.62□□□□□ -0.39
TRIM13-205ENST00000442421 ACTL8Q9H568 366 aa12.62□□□□□ -0.39
TRIM13-205ENST00000442421 PCDH18Q9HCL0 1135 aa12.62□□□□□ -0.39
TRIM13-205ENST00000442421 KLC4Q9NSK0 619 aa12.62□□□□□ -0.39
TRIM13-205ENST00000442421 ZNF624Q9P2J8 865 aaPredicted RBP12.62□□□□□ -0.39
TRIM13-205ENST00000442421 DNPEPQ9ULA0 475 aa12.62□□□□□ -0.39
TRIM13-205ENST00000442421 TOX3O15405 576 aaPredicted RBP12.61□□□□□ -0.39
TRIM13-205ENST00000442421 MFSD11O43934 449 aa12.61□□□□□ -0.39
TRIM13-205ENST00000442421 VIPP01282 170 aa12.61□□□□□ -0.39
TRIM13-205ENST00000442421 FGF5P12034 268 aa12.61□□□□□ -0.39
TRIM13-205ENST00000442421 XRCC1P18887 633 aaPredicted RBP12.61□□□□□ -0.39
TRIM13-205ENST00000442421 SLC19A1P41440 591 aa12.61□□□□□ -0.39
TRIM13-205ENST00000442421 RPS18P62269 152 aaKnown RBP12.61□□□□□ -0.39
TRIM13-205ENST00000442421 MMRN1Q13201 1228 aa12.61□□□□□ -0.39
TRIM13-205ENST00000442421 SEMA5AQ13591 1074 aa12.61□□□□□ -0.39
TRIM13-205ENST00000442421 BOLA3Q53S33 107 aa12.61□□□□□ -0.39
TRIM13-205ENST00000442421 CRTC3Q6UUV7 619 aa12.61□□□□□ -0.39
TRIM13-205ENST00000442421 FAM92BQ6ZTR7 304 aa12.61□□□□□ -0.39
TRIM13-205ENST00000442421 APTXQ7Z2E3 356 aaKnown RBP12.61□□□□□ -0.39
TRIM13-205ENST00000442421 ANKRD20A12PQ8NF67 263 aa12.61□□□□□ -0.39
TRIM13-205ENST00000442421 UCK1Q9HA47 277 aa12.61□□□□□ -0.39
TRIM13-205ENST00000442421 PCDH9Q9HC56 1237 aa12.61□□□□□ -0.39
TRIM13-205ENST00000442421 LHX9Q9NQ69 397 aa12.61□□□□□ -0.39
TRIM13-205ENST00000442421 DTLQ9NZJ0 730 aa12.61□□□□□ -0.39
TRIM13-205ENST00000442421 PKD2L2Q9NZM6 624 aa12.61□□□□□ -0.39
TRIM13-205ENST00000442421 SLC23A2Q9UGH3 650 aa12.61□□□□□ -0.39
TRIM13-205ENST00000442421 PADI1Q9ULC6 663 aa12.61□□□□□ -0.39
TRIM13-205ENST00000442421 PCDHGA6Q9Y5G7 932 aa12.61□□□□□ -0.39
TRIM13-205ENST00000442421 ADGRG1Q9Y653 693 aa12.61□□□□□ -0.39
TRIM13-205ENST00000442421 SCINQ9Y6U3 715 aa12.61□□□□□ -0.39
TRIM13-205ENST00000442421 DOPEY1Q5JWR5 2465 aa12.61□□□□□ -0.39
TRIM13-205ENST00000442421 GOLGA6L3A6NEY3 463 aa12.6□□□□□ -0.39
TRIM13-205ENST00000442421 PDZK1P1A8MUH7 402 aa12.6□□□□□ -0.39
TRIM13-205ENST00000442421 MTA2O94776 668 aa12.6□□□□□ -0.39
TRIM13-205ENST00000442421 CAPZBP47756 277 aa12.6□□□□□ -0.39
TRIM13-205ENST00000442421 ZNF165P49910 485 aa12.6□□□□□ -0.39
TRIM13-205ENST00000442421 PGDP52209 483 aa12.6□□□□□ -0.39
TRIM13-205ENST00000442421 NIPAL4Q0D2K0 466 aa12.6□□□□□ -0.39
TRIM13-205ENST00000442421 INSCQ1MX18 579 aa12.6□□□□□ -0.39
TRIM13-205ENST00000442421 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRIM13-205ENST00000442421 TDRD12Q587J7 1177 aaKnown RBP12.6□□□□□ -0.39
TRIM13-205ENST00000442421 ANKRD20A8PQ5CZ79 823 aa12.6□□□□□ -0.39
TRIM13-205ENST00000442421 CACHD1Q5VU97 1274 aa12.6□□□□□ -0.39
TRIM13-205ENST00000442421 ALS2CLQ60I27 953 aa12.6□□□□□ -0.39
TRIM13-205ENST00000442421 E4F1Q66K89 784 aaPredicted RBP12.6□□□□□ -0.39
TRIM13-205ENST00000442421 ALG1LQ6GMV1 187 aa12.6□□□□□ -0.39
TRIM13-205ENST00000442421 ZNF571Q7Z3V5 609 aaPredicted RBP12.6□□□□□ -0.39
TRIM13-205ENST00000442421 PRSS42Q7Z5A4 293 aa12.6□□□□□ -0.39
TRIM13-205ENST00000442421 PPP1R3BQ86XI6 285 aa12.6□□□□□ -0.39
TRIM13-205ENST00000442421 RAVER1Q8IY67 606 aaKnown RBP12.6□□□□□ -0.39
TRIM13-205ENST00000442421 AOPEPQ8N6M6 819 aa12.6□□□□□ -0.39
TRIM13-205ENST00000442421 ARRDC2Q8TBH0 407 aa12.6□□□□□ -0.39
TRIM13-205ENST00000442421 LRRN4Q8WUT4 740 aa12.6□□□□□ -0.39
TRIM13-205ENST00000442421 LYSMD1Q96S90 227 aa12.6□□□□□ -0.39
TRIM13-205ENST00000442421 BRD8Q9H0E9 1235 aa12.6□□□□□ -0.39
TRIM13-205ENST00000442421 HAUS4Q9H6D7 363 aa12.6□□□□□ -0.39
TRIM13-205ENST00000442421 AKIRIN1Q9H9L7 192 aaPredicted RBP12.6□□□□□ -0.39
TRIM13-205ENST00000442421 RBM22Q9NW64 420 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRIM13-205ENST00000442421 DNAJC16Q9Y2G8 782 aa12.6□□□□□ -0.39
TRIM13-205ENST00000442421 CCDC88CQ9P219 2028 aa12.59□□□□□ -0.39
TRIM13-205ENST00000442421 PIKFYVEQ9Y2I7 2098 aa12.59□□□□□ -0.39
TRIM13-205ENST00000442421 LRRC53A6NM62 1247 aa12.59□□□□□ -0.39
TRIM13-205ENST00000442421 OR52A4PA6NMU1 304 aa12.59□□□□□ -0.39
TRIM13-205ENST00000442421 DDX3XO00571 662 aaKnown RBP eCLIP12.59□□□□□ -0.397e-7■■□□□ 13.9
TRIM13-205ENST00000442421 SORBS2O94875 1100 aaKnown RBP12.59□□□□□ -0.39
TRIM13-205ENST00000442421 SLC25A14O95258 325 aaPredicted RBP12.59□□□□□ -0.39
TRIM13-205ENST00000442421 MT-ND3P03897 115 aa12.59□□□□□ -0.39
TRIM13-205ENST00000442421 HLA-DQB2P05538 268 aa12.59□□□□□ -0.39
TRIM13-205ENST00000442421 CD48P09326 243 aa12.59□□□□□ -0.39
TRIM13-205ENST00000442421 CA4P22748 312 aa12.59□□□□□ -0.39
TRIM13-205ENST00000442421 RPL10P27635 214 aaKnown RBP12.59□□□□□ -0.39
TRIM13-205ENST00000442421 CLCNKAP51800 687 aa12.59□□□□□ -0.39
TRIM13-205ENST00000442421 RPL26P61254 145 aaKnown RBP12.59□□□□□ -0.39
TRIM13-205ENST00000442421 PPP1CAP62136 330 aa12.59□□□□□ -0.39
TRIM13-205ENST00000442421 GALNT2Q10471 571 aa12.59□□□□□ -0.39
TRIM13-205ENST00000442421 GPR18Q14330 331 aa12.59□□□□□ -0.39
TRIM13-205ENST00000442421 KRT81Q14533 505 aa12.59□□□□□ -0.39
TRIM13-205ENST00000442421 KCNAB1Q14722 419 aa12.59□□□□□ -0.39
TRIM13-205ENST00000442421 ASIC2Q16515 512 aa12.59□□□□□ -0.39
TRIM13-205ENST00000442421 QPCTQ16769 361 aa12.59□□□□□ -0.39
TRIM13-205ENST00000442421 PRR30Q53SZ7 412 aaPredicted RBP12.59□□□□□ -0.39
TRIM13-205ENST00000442421 ZNF569Q5MCW4 686 aa12.59□□□□□ -0.39
TRIM13-205ENST00000442421 ZNF787Q6DD87 383 aa12.59□□□□□ -0.39
TRIM13-205ENST00000442421 PWWP2BQ6NUJ5 590 aa12.59□□□□□ -0.39
TRIM13-205ENST00000442421 IRGCQ6NXR0 463 aa12.59□□□□□ -0.39
TRIM13-205ENST00000442421 FAM199XQ6PEV8 388 aaPredicted RBP12.59□□□□□ -0.39
TRIM13-205ENST00000442421 CCHCR1Q8TD31 782 aa12.59□□□□□ -0.39
TRIM13-205ENST00000442421 TEKT4Q8WW24 435 aa12.59□□□□□ -0.39
TRIM13-205ENST00000442421 KLHL6Q8WZ60 621 aa12.59□□□□□ -0.39
TRIM13-205ENST00000442421 MAML1Q92585 1016 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms