RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 ZBTB44Q8NCP5 570 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 CATSPER1Q8NEC5 780 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 RMDN1Q96DB5 314 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 HMCESQ96FZ2 354 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 ZNF570Q96NI8 536 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 CAMK1GQ96NX5 476 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 SERPINI1Q99574 410 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 DDX50Q9BQ39 737 aaKnown RBP4.74□□□□□ -1.65
EDEM3-203ENST00000439962 ZYG11BQ9C0D3 744 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 NMUR2Q9GZQ4 415 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 FAM192AQ9GZU8 254 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 DRC3Q9H069 523 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 CDH19Q9H159 772 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 SNX15Q9NRS6 342 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 VPS45Q9NRW7 570 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 TMEM45AQ9NWC5 275 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 KIAA1522Q9P206 1035 aaPredicted RBP4.74□□□□□ -1.65
EDEM3-203ENST00000439962 KLHL8Q9P2G9 620 aaPredicted RBP4.74□□□□□ -1.65
EDEM3-203ENST00000439962 PPARGC1AQ9UBK2 798 aaKnown RBP4.74□□□□□ -1.65
EDEM3-203ENST00000439962 MBD1Q9UIS9 605 aaPredicted RBP4.74□□□□□ -1.65
EDEM3-203ENST00000439962 SLC25A13Q9UJS0 675 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 DCTN4Q9UJW0 460 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 ERVW-1Q9UQF0 538 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 RAP2CQ9Y3L5 183 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 RPS6KL1Q9Y6S9 549 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 CACNA1AO00555 2505 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 NBASA2RRP1 2371 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 B2RBV5 119 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 CASQ2O14958 399 aaPredicted RBP4.74□□□□□ -1.65
EDEM3-203ENST00000439962 MATN3O15232 486 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 MAP3K7O43318 606 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 RAMP2O60895 175 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 SMNDC1O75940 238 aaKnown RBP eCLIP4.74□□□□□ -1.65
EDEM3-203ENST00000439962 PIGNO95427 931 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 IGLV3-27P01718 113 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 PSMB4P28070 264 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 RECQLP46063 649 aaPredicted RBP4.74□□□□□ -1.65
EDEM3-203ENST00000439962 NDST2P52849 883 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 COPAP53621 1224 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 CLDN6P56747 220 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 MRPS21P82921 87 aaKnown RBP4.74□□□□□ -1.65
EDEM3-203ENST00000439962 KLC1Q07866 573 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 SLC12A1Q13621 1099 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 RSPO4Q2I0M5 234 aaPredicted RBP4.74□□□□□ -1.65
EDEM3-203ENST00000439962 MROH9Q5TGP6 573 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 LIPMQ5VYY2 423 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 ZFP1Q6P2D0 407 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 C16orf89Q6UX73 402 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 DPY19L3Q6ZPD9 716 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 LRRC74BQ6ZQY2 392 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 RINLQ6ZS11 566 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 LPCAT2Q7L5N7 544 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 PID1Q7Z2X4 250 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 SLC41A1Q8IVJ1 513 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 MPP5Q8N3R9 675 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 CHCHD4Q8N4Q1 142 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 CCNYQ8ND76 341 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 FIBINQ8TAL6 211 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 DLG3Q92796 817 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 TSPAN17Q96FV3 270 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 TRAPPC9Q96Q05 1148 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 SMIM14Q96QK8 99 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 C19orf43Q9BQ61 176 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 TRMOQ9BU70 441 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 WRAP53Q9BUR4 548 aaKnown RBP4.74□□□□□ -1.65
EDEM3-203ENST00000439962 DUSP15Q9H1R2 295 aaPredicted RBP4.74□□□□□ -1.65
EDEM3-203ENST00000439962 POPDC3Q9HBV1 291 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 OXSMQ9NWU1 459 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 SYBUQ9NX95 663 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 PDP2Q9P2J9 529 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 EVLQ9UI08 416 aaPredicted RBP4.74□□□□□ -1.65
EDEM3-203ENST00000439962 GGT7Q9UJ14 662 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 PCDHGA2Q9Y5H1 932 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 SPTA1P02549 2419 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 LNP1A1A4G5 178 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 WDR91A4D1P6 747 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 TRPC5OSA6NMA1 111 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 H0YJX3 145 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 ZNF195O14628 629 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 RNASEH1O60930 286 aaKnown RBP4.73□□□□□ -1.65
EDEM3-203ENST00000439962 LEFTY1O75610 366 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 NEBLO76041 1014 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 ATXN8OSP0DMR3 200 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 THRAP10827 490 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 MYF5P13349 255 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 CPOXP36551 454 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 NBL1P41271 181 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 TNFRSF4P43489 277 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 PPM1FP49593 454 aaPredicted RBP4.73□□□□□ -1.65
EDEM3-203ENST00000439962 ATP4BP51164 291 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 SCNN1BP51168 640 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 CLDN2P57739 230 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 POU4F1Q01851 419 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 GNA12Q03113 381 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 RING1Q06587 406 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 OVGP1Q12889 678 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 CDC16Q13042 620 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 MSLNQ13421 630 aaPredicted RBP4.73□□□□□ -1.65
EDEM3-203ENST00000439962 NAA25Q14CX7 972 aa4.73□□□□□ -1.65
EDEM3-203ENST00000439962 MAPRE2Q15555 327 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms