RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 ITIH4Q14624 930 aa7.4□□□□□ -1.22
UBR3-205ENST00000439681 LDLRAP1Q5SW96 308 aa7.4□□□□□ -1.22
UBR3-205ENST00000439681 TPRG1LQ5T0D9 272 aa7.4□□□□□ -1.22
UBR3-205ENST00000439681 ABI3BPQ7Z7G0 1075 aa7.4□□□□□ -1.22
UBR3-205ENST00000439681 ADGRG6Q86SQ4 1221 aa7.4□□□□□ -1.22
UBR3-205ENST00000439681 SPNS2Q8IVW8 549 aa7.4□□□□□ -1.22
UBR3-205ENST00000439681 CLDN19Q8N6F1 224 aa7.4□□□□□ -1.22
UBR3-205ENST00000439681 RASGEF1AQ8N9B8 481 aa7.4□□□□□ -1.22
UBR3-205ENST00000439681 ZBTB44Q8NCP5 570 aa7.4□□□□□ -1.22
UBR3-205ENST00000439681 GABPB2Q8TAK5 448 aaPredicted RBP7.4□□□□□ -1.22
UBR3-205ENST00000439681 MZB1Q8WU39 189 aa7.4□□□□□ -1.22
UBR3-205ENST00000439681 DNASE2BQ8WZ79 361 aa7.4□□□□□ -1.22
UBR3-205ENST00000439681 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.4□□□□□ -1.22
UBR3-205ENST00000439681 SERAC1Q96JX3 654 aa7.4□□□□□ -1.22
UBR3-205ENST00000439681 RHOJQ9H4E5 214 aa7.4□□□□□ -1.22
UBR3-205ENST00000439681 PPCSQ9HAB8 311 aa7.4□□□□□ -1.22
UBR3-205ENST00000439681 TRIM39Q9HCM9 518 aa7.4□□□□□ -1.22
UBR3-205ENST00000439681 ZSCAN32Q9NX65 697 aa7.4□□□□□ -1.22
UBR3-205ENST00000439681 MED16Q9Y2X0 877 aa7.4□□□□□ -1.22
UBR3-205ENST00000439681 TMEM98Q9Y2Y6 226 aa7.4□□□□□ -1.22
UBR3-205ENST00000439681 BPTFQ12830 3046 aa7.4□□□□□ -1.22
UBR3-205ENST00000439681 ANKRD36A6QL64 1941 aa7.4□□□□□ -1.22
UBR3-205ENST00000439681 A0A1W2PR77 199 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 SMIM23A6NLE4 172 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 FOXO6A8MYZ6 492 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 PRMT5O14744 637 aaPredicted RBP7.4□□□□□ -1.23
UBR3-205ENST00000439681 GALR2O43603 387 aaPredicted RBP7.4□□□□□ -1.23
UBR3-205ENST00000439681 IVLP07476 585 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 INHBAP08476 426 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 ITGA2BP08514 1039 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 ZNF7P17097 686 aaPredicted RBP7.4□□□□□ -1.23
UBR3-205ENST00000439681 RPS3P23396 243 aaKnown RBP eCLIP7.4□□□□□ -1.23
UBR3-205ENST00000439681 SPRP35270 261 aaPredicted RBP7.4□□□□□ -1.23
UBR3-205ENST00000439681 LIMK2P53671 638 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 TMEM115Q12893 351 aaPredicted RBP7.4□□□□□ -1.23
UBR3-205ENST00000439681 BMPR2Q13873 1038 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 PLK5Q496M5 336 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 CTSL3PQ5NE16 218 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 CEP85LQ5SZL2 805 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 RBM20Q5T481 1227 aaKnown RBP7.4□□□□□ -1.23
UBR3-205ENST00000439681 RNF187Q5TA31 235 aaPredicted RBP7.4□□□□□ -1.23
UBR3-205ENST00000439681 KCTD16Q68DU8 428 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 MACC1Q6ZN28 852 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 LPCAT2Q7L5N7 544 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 PHYKPLQ8IUZ5 450 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 RBFAQ8N0V3 343 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 GDAP1Q8TB36 358 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 FOXJ1Q92949 421 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 SGF29Q96ES7 293 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 ATXN7L3BQ96GX2 97 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 VPS39Q96JC1 886 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 HSPA12BQ96MM6 686 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 SLC6A18Q96N87 628 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 TTC1Q99614 292 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 GPR22Q99680 433 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 AARSD1Q9BTE6 412 aaKnown RBP7.4□□□□□ -1.23
UBR3-205ENST00000439681 WDR26Q9H7D7 661 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 PSMC3IPQ9P2W1 217 aaPredicted RBP7.4□□□□□ -1.23
UBR3-205ENST00000439681 ATXN10Q9UBB4 475 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 LGALS13Q9UHV8 139 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 EIF2B4Q9UI10 523 aaKnown RBP7.4□□□□□ -1.23
UBR3-205ENST00000439681 PCYT1BQ9Y5K3 369 aaPredicted RBP7.4□□□□□ -1.23
UBR3-205ENST00000439681 ZDBF2Q9HCK1 2354 aa7.4□□□□□ -1.23
UBR3-205ENST00000439681 MYLKQ15746 1914 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 TMEM202A6NGA9 273 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 ATP8B1O43520 1251 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 LILRB5O75023 590 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 CDH16O75309 829 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 WNT1P04628 370 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 CEACAM5P06731 702 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 MYCLP1P12525 358 aaPredicted RBP7.39□□□□□ -1.23
UBR3-205ENST00000439681 ATP1B2P14415 290 aaPredicted RBP7.39□□□□□ -1.23
UBR3-205ENST00000439681 PKMP14618 531 aaKnown RBP7.39□□□□□ -1.23
UBR3-205ENST00000439681 ZNF8P17098 575 aaPredicted RBP7.39□□□□□ -1.23
UBR3-205ENST00000439681 CNR2P34972 360 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 PPARGP37231 505 aaPredicted RBP7.39□□□□□ -1.23
UBR3-205ENST00000439681 NSG1P42857 185 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 POLD2P49005 469 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 SERPINB9P50453 376 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 CSRP3P50461 194 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 NUBP1P53384 320 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 PGGT1BP53609 377 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 CTSCP53634 463 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 CDKN2DP55273 166 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 KIAA1024LP59773 190 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 KRT71Q3SY84 523 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 TNFAIP8L3Q5GJ75 292 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 MROH9Q5TGP6 573 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 HECTD2Q5U5R9 776 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 PMS2CLQ68D20 193 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 KYAT3Q6YP21 454 aaKnown RBP7.39□□□□□ -1.23
UBR3-205ENST00000439681 Q6ZSR6 202 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 DCLK2Q8N568 766 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 OR13H1Q8NG92 308 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 HEXDCQ8WVB3 486 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 SNX19Q92543 992 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 ZC3H10Q96K80 434 aaKnown RBP7.39□□□□□ -1.23
UBR3-205ENST00000439681 NDNQ99608 321 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 OLFM1Q99784 485 aa7.39□□□□□ -1.23
UBR3-205ENST00000439681 SH3GL2Q99962 352 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms