RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 PDGFDQ9GZP0 370 aaPredicted RBP13.29□□□□□ -0.28
ACTN1-204ENST00000438964 RNF167Q9H6Y7 350 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 WDR6Q9NNW5 1121 aaKnown RBP13.29□□□□□ -0.28
ACTN1-204ENST00000438964 RASSF1Q9NS23 344 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 IL37Q9NZH6 218 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 MPP6Q9NZW5 540 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 ANKMY1Q9P2S6 941 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 LIMD1Q9UGP4 676 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 PCM1Q15154 2024 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 DIRAS1O95057 198 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 PRSS23O95084 383 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 CST1P01037 141 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 DNTTP04053 509 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 HLA-DQB2P05538 268 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 GSTM2P28161 218 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 ALDH3A2P51648 485 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 PSMD5Q16401 504 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 BLOC1S3Q6QNY0 202 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 CCDC103Q8IW40 242 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 CELF2-AS1Q8N7Q2 184 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 C2CD4AQ8NCU7 369 aaPredicted RBP13.29□□□□□ -0.28
ACTN1-204ENST00000438964 MCOLN3Q8TDD5 553 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 PTCD2Q8WV60 388 aaKnown RBP13.29□□□□□ -0.28
ACTN1-204ENST00000438964 MBOAT4Q96T53 435 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 BARD1Q99728 777 aaKnown RBP13.29□□□□□ -0.28
ACTN1-204ENST00000438964 CTRCQ99895 268 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 AMBNQ9NP70 447 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 HPS4Q9NQG7 708 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 RBM22Q9NW64 420 aaKnown RBP eCLIP13.29□□□□□ -0.282e-6■■□□□ 12.7
ACTN1-204ENST00000438964 KLHL3Q9UH77 587 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 STAP1Q9ULZ2 295 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 GJA3Q9Y6H8 435 aa13.29□□□□□ -0.28
ACTN1-204ENST00000438964 SUPT3HB4E1H0 165 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 SLC1A7O00341 560 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 C22orf31O95567 290 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 S100A1P23297 94 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 ICAM3P32942 547 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 RAB15P59190 212 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 DNAJB13P59910 316 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 SOX4Q06945 474 aaPredicted RBP13.28□□□□□ -0.28
ACTN1-204ENST00000438964 TRIP4Q15650 581 aaPredicted RBP13.28□□□□□ -0.28
ACTN1-204ENST00000438964 LRIT3Q3SXY7 679 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 LAIR1Q6GTX8 287 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 MILR1Q7Z6M3 343 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 ZDHHC17Q8IUH5 632 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 DEPDC4Q8N2C3 294 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 TUBA1CQ9BQE3 449 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 WDCPQ9H6R7 721 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 ZBTB20Q9HC78 741 aaPredicted RBP13.28□□□□□ -0.28
ACTN1-204ENST00000438964 HACL1Q9UJ83 578 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 VPS4AQ9UN37 437 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 B3GNT3Q9Y2A9 372 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 A0A087X1B8 175 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 ZNF487B1APH4 448 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 TBC1D4O60343 1298 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 SOAT2O75908 522 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 LBPP18428 481 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 CD40LGP29965 261 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 HADHAP40939 763 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 PIK3CGP48736 1102 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 SKIV2LQ15477 1246 aaKnown RBP13.28□□□□□ -0.28
ACTN1-204ENST00000438964 RSBN1Q5VWQ0 802 aaPredicted RBP13.28□□□□□ -0.28
ACTN1-204ENST00000438964 CATSPERGQ6ZRH7 1159 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 GALNT10Q86SR1 603 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 PHYKPLQ8IUZ5 450 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 FAM167AQ96KS9 214 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 RGS18Q9NS28 235 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 DDX28Q9NUL7 540 aaKnown RBP13.28□□□□□ -0.28
ACTN1-204ENST00000438964 GTF2IRD1Q9UHL9 959 aa13.28□□□□□ -0.28
ACTN1-204ENST00000438964 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.28□□□□□ -0.28
ACTN1-204ENST00000438964 NRCAMQ92823 1304 aa13.27□□□□□ -0.28
ACTN1-204ENST00000438964 A0A0C4DFX4 3053 aa13.27□□□□□ -0.28
ACTN1-204ENST00000438964 DBTP11182 482 aaKnown RBP13.27□□□□□ -0.28
ACTN1-204ENST00000438964 PFKLP17858 780 aa13.27□□□□□ -0.28
ACTN1-204ENST00000438964 SNX16P57768 344 aa13.27□□□□□ -0.28
ACTN1-204ENST00000438964 POU4F1Q01851 419 aa13.27□□□□□ -0.28
ACTN1-204ENST00000438964 CACNB2Q08289 660 aaPredicted RBP13.27□□□□□ -0.28
ACTN1-204ENST00000438964 RAPSNQ13702 412 aa13.27□□□□□ -0.28
ACTN1-204ENST00000438964 FBXO47Q5MNV8 452 aa13.27□□□□□ -0.28
ACTN1-204ENST00000438964 C9orf57Q5W0N0 161 aa13.27□□□□□ -0.28
ACTN1-204ENST00000438964 DESI1Q6ICB0 168 aa13.27□□□□□ -0.28
ACTN1-204ENST00000438964 SULT1C3Q6IMI6 304 aa13.27□□□□□ -0.28
ACTN1-204ENST00000438964 TMC5Q6UXY8 1006 aa13.27□□□□□ -0.28
ACTN1-204ENST00000438964 PDZD4Q76G19 769 aaPredicted RBP13.27□□□□□ -0.28
ACTN1-204ENST00000438964 ATPAF2Q8N5M1 289 aa13.27□□□□□ -0.28
ACTN1-204ENST00000438964 B3GALNT2Q8NCR0 500 aa13.27□□□□□ -0.28
ACTN1-204ENST00000438964 OR2T11Q8NH01 316 aa13.27□□□□□ -0.28
ACTN1-204ENST00000438964 OSCP1Q8WVF1 389 aa13.27□□□□□ -0.28
ACTN1-204ENST00000438964 ZNF641Q96N77 438 aaPredicted RBP13.27□□□□□ -0.28
ACTN1-204ENST00000438964 WDR12Q9GZL7 423 aaKnown RBP13.27□□□□□ -0.28
ACTN1-204ENST00000438964 IKZF3Q9UKT9 509 aa13.27□□□□□ -0.28
ACTN1-204ENST00000438964 UGT2A1Q9Y4X1 527 aa13.27□□□□□ -0.28
ACTN1-204ENST00000438964 ASB1Q9Y576 335 aa13.27□□□□□ -0.28
ACTN1-204ENST00000438964 COL2A1P02458 1487 aaPredicted RBP13.27□□□□□ -0.29
ACTN1-204ENST00000438964 UBA6A0AVT1 1052 aaPredicted RBP13.27□□□□□ -0.29
ACTN1-204ENST00000438964 AP3D1O14617 1153 aa13.27□□□□□ -0.29
ACTN1-204ENST00000438964 FCGR1AP12314 374 aa13.27□□□□□ -0.29
ACTN1-204ENST00000438964 MASP1P48740 699 aa13.27□□□□□ -0.29
ACTN1-204ENST00000438964 TNFAIP2Q03169 654 aa13.27□□□□□ -0.29
ACTN1-204ENST00000438964 FRA10AC1Q70Z53 315 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms