RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 ITCHQ96J02 903 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 PLEKHA8Q96JA3 519 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 FEM1CQ96JP0 617 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 TSGA13Q96PP4 275 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 YTHDF1Q9BYJ9 559 aaKnown RBP6.64□□□□□ -1.35
CSDE1-205ENST00000438362 NOL6Q9H6R4 1146 aaKnown RBP6.64□□□□□ -1.35
CSDE1-205ENST00000438362 IPPKQ9H8X2 491 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 LRTM1Q9HBL6 345 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 PRDM5Q9NQX1 630 aaPredicted RBP6.64□□□□□ -1.35
CSDE1-205ENST00000438362 DYRK4Q9NR20 520 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 INTS10Q9NVR2 710 aaKnown RBP6.64□□□□□ -1.35
CSDE1-205ENST00000438362 NUDT4Q9NZJ9 180 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 ENOPH1Q9UHY7 261 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 TEKT2Q9UIF3 430 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 PADI4Q9UM07 663 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 KCNH4Q9UQ05 1017 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 PDE10AQ9Y233 779 aa6.64□□□□□ -1.35
CSDE1-205ENST00000438362 MYH9P35579 1960 aaKnown RBP6.64□□□□□ -1.35
CSDE1-205ENST00000438362 CLDN11O75508 207 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 BEST1O76090 585 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 RAP2AP10114 183 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 CTPS1P17812 591 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 TACR2P21452 398 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 NR4A1P22736 598 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 GLDCP23378 1020 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 SERPINA4P29622 427 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 MAPKAPK2P49137 400 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 RAB15P59190 212 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 GNA12Q03113 381 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 PPP1R3AQ16821 1122 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 ARMC4Q5T2S8 1044 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 SYTL1Q8IYJ3 562 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 OR7D4Q8NG98 312 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 CLHC1Q8NHS4 586 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 ZFP28Q8NHY6 868 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 TMEM159Q96B96 161 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 MED8Q96G25 268 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 REXO5Q96IC2 774 aaKnown RBP6.63□□□□□ -1.35
CSDE1-205ENST00000438362 ZBED3Q96IU2 234 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-205ENST00000438362 TSSK3Q96PN8 268 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 PANX1Q96RD7 426 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 NODALQ96S42 347 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 C16orf70Q9BSU1 422 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 MRM3Q9HC36 420 aaKnown RBP6.63□□□□□ -1.35
CSDE1-205ENST00000438362 ABCB10Q9NRK6 738 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 IFT80Q9P2H3 777 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-205ENST00000438362 PCDHB1Q9Y5F3 818 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 RAI2Q9Y5P3 530 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 DGKBQ9Y6T7 804 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 GOLGA4Q13439 2230 aaKnown RBP6.63□□□□□ -1.35
CSDE1-205ENST00000438362 A0A1W2PP18 115 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 OR6C75A6NL08 312 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 SH3BGRLO75368 114 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 SCELO95171 688 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 ANGPTL1O95841 491 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 FTH1P02794 183 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 CNPP09543 421 aaKnown RBP6.63□□□□□ -1.35
CSDE1-205ENST00000438362 CYP4B1P13584 511 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 MTPNP58546 118 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 FOXM1Q08050 763 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 SCAPQ12770 1279 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 CNTN1Q12860 1018 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 DAG1Q14118 895 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 SIM2Q14190 667 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-205ENST00000438362 TIMM50Q3ZCQ8 353 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 TECRLQ5HYJ1 363 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 LDLRAP1Q5SW96 308 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 RSBN1Q5VWQ0 802 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-205ENST00000438362 MSANTD2Q6P1R3 559 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 FAM151BQ6UXP7 276 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 CERS6Q6ZMG9 384 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 DDX53Q86TM3 631 aaKnown RBP6.63□□□□□ -1.35
CSDE1-205ENST00000438362 CIR1Q86X95 450 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-205ENST00000438362 CILP2Q8IUL8 1156 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 HID1Q8IV36 788 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 PIP4P2Q8N4L2 257 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 OR10A6Q8NH74 314 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 PSMA8Q8TAA3 256 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 RSPH1Q8WYR4 309 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 ZUFSPQ96AP4 578 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 TMEM209Q96SK2 561 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 WDR83Q9BRX9 315 aaKnown RBP6.63□□□□□ -1.35
CSDE1-205ENST00000438362 REXO4Q9GZR2 422 aaKnown RBP6.63□□□□□ -1.35
CSDE1-205ENST00000438362 NUAK2Q9H093 628 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 HIPK3Q9H422 1215 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 EPB41L1Q9H4G0 881 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 KRT84Q9NSB2 600 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 TUBA8Q9NY65 449 aaPredicted RBP6.63□□□□□ -1.35
CSDE1-205ENST00000438362 FNIP2Q9P278 1114 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 KLHL3Q9UH77 587 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 DYRK1BQ9Y463 629 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 PCDHGC4Q9Y5F7 938 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 ARL5AQ9Y689 179 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 ANKRD12Q6UB98 2062 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 SYNDIG1LA6NDD5 238 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 TBKBP1A7MCY6 615 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 CLDN25C9JDP6 229 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 SCAMP3O14828 347 aaKnown RBP6.63□□□□□ -1.35
CSDE1-205ENST00000438362 BCKDKO14874 412 aa6.63□□□□□ -1.35
CSDE1-205ENST00000438362 KERAO60938 352 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms