RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 ZRANB3Q5FWF4 1079 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 BNC2Q6ZN30 1099 aaPredicted RBP11.85□□□□□ -0.51
CTCFL-209ENST00000433949 TPGS1Q6ZTW0 290 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 BBS7Q8IWZ6 715 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 DDI1Q8WTU0 396 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 N4BP2L2Q92802 583 aaPredicted RBP11.85□□□□□ -0.51
CTCFL-209ENST00000433949 FGF13Q92913 245 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 MYO19Q96H55 970 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 C1QTNF3Q9BXJ4 246 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 S100A14Q9HCY8 104 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 TDP1Q9NUW8 608 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 PLK2Q9NYY3 685 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 IL17CQ9P0M4 197 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 KIAA1522Q9P206 1035 aaPredicted RBP11.85□□□□□ -0.51
CTCFL-209ENST00000433949 TRMT6Q9UJA5 497 aaKnown RBP11.85□□□□□ -0.51
CTCFL-209ENST00000433949 MED16Q9Y2X0 877 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 FIS1Q9Y3D6 152 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 ZNF711Q9Y462 761 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 PCDHB9Q9Y5E1 797 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 PCDHB1Q9Y5F3 818 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 SLC30A1Q9Y6M5 507 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 VCANP13611 3396 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 NOTCH4Q99466 2003 aa11.85□□□□□ -0.51
CTCFL-209ENST00000433949 FGF19O95750 216 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 IL2P60568 153 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 PEX6Q13608 980 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 PFKFB4Q16877 469 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 ATAT1Q5SQI0 421 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 CES5AQ6NT32 575 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 PSAPL1Q6NUJ1 521 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 TMEM184AQ6ZMB5 413 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 FBXO39Q8N4B4 442 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 LEMD2Q8NC56 503 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 C19orf60Q96EN9 201 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 GPR21Q99679 349 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 MRPL1Q9BYD6 325 aaKnown RBP11.84□□□□□ -0.51
CTCFL-209ENST00000433949 GPR63Q9BZJ6 419 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 VCX3BQ9H321 246 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 G3BP2Q9UN86 482 aaKnown RBP11.84□□□□□ -0.51
CTCFL-209ENST00000433949 FCF1Q9Y324 198 aaKnown RBP11.84□□□□□ -0.51
CTCFL-209ENST00000433949 E5RI56 91 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 H3BMM5 538 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 UBXN8O00124 270 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 UBFD1O14562 309 aaKnown RBP11.84□□□□□ -0.51
CTCFL-209ENST00000433949 LIN7AO14910 233 aaPredicted RBP11.84□□□□□ -0.51
CTCFL-209ENST00000433949 ACADVLP49748 655 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 BCL2L1Q07817 233 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 CDC16Q13042 620 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 LCP2Q13094 533 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 ANKS6Q68DC2 871 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 LARP4Q71RC2 724 aaKnown RBP eCLIP11.84□□□□□ -0.511e-7■■□□□ 12.6
CTCFL-209ENST00000433949 EFL1Q7Z2Z2 1120 aaKnown RBP11.84□□□□□ -0.51
CTCFL-209ENST00000433949 HPS6Q86YV9 775 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 NPAS3Q8IXF0 933 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 FIBINQ8TAL6 211 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 NRG4Q8WWG1 115 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 EXT2Q93063 718 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 CCDC124Q96CT7 223 aaKnown RBP11.84□□□□□ -0.51
CTCFL-209ENST00000433949 RCN3Q96D15 328 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 ZNF184Q99676 751 aaPredicted RBP11.84□□□□□ -0.51
CTCFL-209ENST00000433949 LINC00597Q9H2U6 94 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 PFDN4Q9NQP4 134 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 LMCD1Q9NZU5 365 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 LRCH1Q9Y2L9 728 aa11.84□□□□□ -0.51
CTCFL-209ENST00000433949 SUPT3HB4E1H0 165 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 AZIN1O14977 448 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 KLK8O60259 260 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 VPS4BO75351 444 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 SUPT3HO75486 399 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 PDE5AO76074 875 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 CDK14O94921 469 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 CYBBP04839 570 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 PRSS56P0CW18 603 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 CLNS1AP54105 237 aaKnown RBP11.83□□□□□ -0.52
CTCFL-209ENST00000433949 STX1BP61266 288 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 GEN1Q17RS7 908 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 SETMARQ53H47 684 aaPredicted RBP11.83□□□□□ -0.52
CTCFL-209ENST00000433949 FAM78AQ5JUQ0 283 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 PIANPQ8IYJ0 282 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 SLC26A7Q8TE54 656 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 LRRC3BQ96PB8 259 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 CDX2Q99626 313 aaPredicted RBP11.83□□□□□ -0.52
CTCFL-209ENST00000433949 SLC25A23Q9BV35 468 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 S1PR5Q9H228 398 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 WDR41Q9HAD4 459 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 MID1IP1Q9NPA3 183 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 ABCB8Q9NUT2 735 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 APPL1Q9UKG1 709 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 WASF2Q9Y6W5 498 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 PSMD12O00232 456 aaPredicted RBP11.83□□□□□ -0.52
CTCFL-209ENST00000433949 PRMT5O14744 637 aaPredicted RBP11.83□□□□□ -0.52
CTCFL-209ENST00000433949 HTRA2O43464 458 aaPredicted RBP11.83□□□□□ -0.52
CTCFL-209ENST00000433949 MLYCDO95822 493 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 IGSF6O95976 241 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 ZNF7P17097 686 aaPredicted RBP11.83□□□□□ -0.52
CTCFL-209ENST00000433949 SH3BP2P78314 561 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 XIAPP98170 497 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 CLCQ05315 142 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 PTK2BQ14289 1009 aa11.83□□□□□ -0.52
CTCFL-209ENST00000433949 FASTKQ14296 549 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms