RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 TULP3O75386 442 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 SLC6A2P23975 617 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 RPIAP49247 311 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 DNAJB13P59910 316 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 SLC25A3Q00325 362 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 CAP1Q01518 475 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 OGDHQ02218 1023 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 ZNF544Q6NX49 715 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 C8orf59Q8N0T1 100 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-208ENST00000430669 PCDH20Q8N6Y1 951 aaKnown RBP11.45□□□□□ -0.58
PTCH1-208ENST00000430669 PIAS1O75925 651 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 UGT2B4P06133 528 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 CYS1Q717R9 158 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 OR7D4Q8NG98 312 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 RCN3Q96D15 328 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 MARK4Q96L34 752 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 FAM83DQ9H4H8 585 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 ZNF780BQ9Y6R6 833 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 PDCD11Q14690 1871 aaKnown RBP11.45□□□□□ -0.58
PTCH1-208ENST00000430669 CLOCKO15516 846 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 CYBAP13498 195 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 DEPDC1Q5TB30 811 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 TTC23Q5W5X9 447 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 PRSS55Q6UWB4 352 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-208ENST00000430669 DEPDC4Q8N2C3 294 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 CHCHD4Q8N4Q1 142 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 AGAP11Q8TF27 550 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 RANBP9Q96S59 729 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 GNEQ9Y223 722 aaKnown RBP11.45□□□□□ -0.58
PTCH1-208ENST00000430669 YIPF1Q9Y548 306 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 E7ESA3 106 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 CHRNA1P02708 482 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 PPM1JQ5JR12 505 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 CPTPQ5TA50 214 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 FBXL22Q6P050 247 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 CHPFQ8IZ52 775 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 RASSF5Q8WWW0 418 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 KCNN1Q92952 543 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 NMUR2Q9GZQ4 415 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 USP29Q9HBJ7 922 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 SGK2Q9HBY8 427 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 RAB26Q9ULW5 256 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 MRPL42Q9Y6G3 142 aaKnown RBP11.45□□□□□ -0.58
PTCH1-208ENST00000430669 PRR5-ARHGAP8B1AHC4 643 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 KERAO60938 352 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 MPSTP25325 297 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 ERVK-21P61565 698 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 ARHGAP8P85298 464 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 ZNHIT3Q15649 155 aaPredicted RBP11.45□□□□□ -0.58
PTCH1-208ENST00000430669 WDR60Q8WVS4 1066 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 RAB11FIP5Q9BXF6 653 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 FBXO10Q9UK96 956 aa11.45□□□□□ -0.58
PTCH1-208ENST00000430669 MTMR11A4FU01 709 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 CNPP09543 421 aaKnown RBP11.44□□□□□ -0.58
PTCH1-208ENST00000430669 TRAP1Q12931 704 aaKnown RBP11.44□□□□□ -0.58
PTCH1-208ENST00000430669 TRIT1Q9H3H1 467 aaKnown RBP11.44□□□□□ -0.58
PTCH1-208ENST00000430669 GPSM3Q9Y4H4 160 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 HS6ST1O60243 411 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 PEX11AO75192 247 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 SERPINB7O75635 380 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 PTX3P26022 381 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-208ENST00000430669 KLF10Q13118 480 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 TIMM50Q3ZCQ8 353 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 CYP2R1Q6VVX0 501 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 SLC44A2Q8IWA5 706 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-208ENST00000430669 FITM2Q8N6M3 262 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 SRFBP1Q8NEF9 429 aaKnown RBP11.44□□□□□ -0.58
PTCH1-208ENST00000430669 PANX1Q96RD7 426 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 ZNF229Q9UJW7 825 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 PNMA8BQ9ULN7 279 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-208ENST00000430669 PCDHGB3Q9Y5G1 929 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 SPATA31D3P0C874 917 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 MYL12AP19105 171 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 DPY19L1Q2PZI1 675 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 SPATA31D4Q6ZUB0 917 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 ARL14EPQ8N8R7 260 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-208ENST00000430669 PGAP3Q96FM1 320 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-208ENST00000430669 PRKAG3Q9UGI9 489 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 ARL5AQ9Y689 179 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 BUD23O43709 281 aaKnown RBP11.44□□□□□ -0.58
PTCH1-208ENST00000430669 IL6P05231 212 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 GPIP06744 558 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 GSTM1P09488 218 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 CRATP43155 626 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 IL5RAQ01344 420 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 EMC10Q5UCC4 262 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 GET4Q7L5D6 327 aaPredicted RBP11.44□□□□□ -0.58
PTCH1-208ENST00000430669 TTLQ8NG68 377 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 OR2T34Q8NGX1 318 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 OR2T3Q8NH03 318 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 C10orf82Q8WW14 230 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 FAM53CQ9NYF3 392 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 ASF1AQ9Y294 204 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 SNX10Q9Y5X0 201 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 LOC285556D6RIA3 1793 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 H0YGN5 161 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 ZCCHC18P0CG32 403 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 IMPDH1P20839 514 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 PTPN5P54829 565 aa11.44□□□□□ -0.58
PTCH1-208ENST00000430669 STK32CQ86UX6 486 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms