RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 DDX43Q9NXZ2 648 aaKnown RBP16.36■□□□□ 0.21
RIF1-204ENST00000430328 CLASP1Q7Z460 1538 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 MAST1Q9Y2H9 1570 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 OTOL1A6NHN0 477 aaPredicted RBP16.36■□□□□ 0.21
RIF1-204ENST00000430328 E9PAM4 449 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 HK1P19367 917 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 EPHA3P29320 983 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 SLC5A3P53794 718 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 ACVR2BQ13705 512 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 TMEM44Q2T9K0 475 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 OR2AJ1Q8NGZ0 328 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 ASB15Q8WXK1 588 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 KCNH7Q9NS40 1196 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 PUM1Q14671 1186 aaKnown RBP eCLIP16.36■□□□□ 0.21
RIF1-204ENST00000430328 LIN52Q52LA3 116 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 SEZ6Q53EL9 994 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 FIGNQ5HY92 759 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 FBXO47Q5MNV8 452 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 LPCAT4Q643R3 524 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 XKRXQ6PP77 449 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 PAMR1Q6UXH9 720 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 LGI2Q8N0V4 545 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 RIT1Q92963 219 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 MSANTD3Q96H12 275 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 MCMBPQ9BTE3 642 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 SPON1Q9HCB6 807 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 MICAL2O94851 1124 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 TRBC1P01850 177 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 GBX2P52951 348 aaPredicted RBP16.36■□□□□ 0.21
RIF1-204ENST00000430328 ZNF311Q5JNZ3 666 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 UBAP2Q5T6F2 1119 aaKnown RBP16.36■□□□□ 0.21
RIF1-204ENST00000430328 NUP54Q7Z3B4 507 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 RANBP3LQ86VV4 465 aaPredicted RBP16.36■□□□□ 0.21
RIF1-204ENST00000430328 BRD9Q9H8M2 597 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 ETNK2Q9NVF9 386 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 RABL2AQ9UBK7 228 aaPredicted RBP16.36■□□□□ 0.21
RIF1-204ENST00000430328 UBQLN2Q9UHD9 624 aa16.36■□□□□ 0.21
RIF1-204ENST00000430328 ISM1B1AKI9 464 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 LRRN1Q6UXK5 716 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 ECHDC2Q86YB7 292 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 TMEM121BQ9BXQ6 578 aaPredicted RBP16.35■□□□□ 0.21
RIF1-204ENST00000430328 POLR3HQ9Y535 204 aaPredicted RBP16.35■□□□□ 0.21
RIF1-204ENST00000430328 AZIN1O14977 448 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 HTR2AP28223 471 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 PUS10Q3MIT2 529 aaKnown RBP16.35■□□□□ 0.21
RIF1-204ENST00000430328 FAM46CQ5VWP2 391 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 CPB2Q96IY4 423 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 FERD3LQ96RJ6 166 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 KAT8Q9H7Z6 458 aaKnown RBP16.35■□□□□ 0.21
RIF1-204ENST00000430328 TSPAN16Q9UKR8 245 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 CTTNBP2Q8WZ74 1663 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 PDLIM1O00151 329 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 ZNF268Q14587 947 aaPredicted RBP16.35■□□□□ 0.21
RIF1-204ENST00000430328 FAM153CQ494X1 144 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 SCIMPQ6UWF3 145 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 SLC37A3Q8NCC5 494 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 CPNE2Q96FN4 548 aaPredicted RBP16.35■□□□□ 0.21
RIF1-204ENST00000430328 ATP13A3Q9H7F0 1226 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 GLS2Q9UI32 602 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 TBX22Q9Y458 520 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 ZMYM2Q9UBW7 1377 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 CD247P20963 164 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 SIM2Q14190 667 aaPredicted RBP16.35■□□□□ 0.21
RIF1-204ENST00000430328 GLYATQ6IB77 296 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 UNC5AQ6ZN44 842 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 UBE2R2Q712K3 238 aaPredicted RBP16.35■□□□□ 0.21
RIF1-204ENST00000430328 RIOX2Q8IUF8 465 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 TOMM5Q8N4H5 51 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 COQ8AQ8NI60 647 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 C2orf49Q9BVC5 232 aaPredicted RBP16.35■□□□□ 0.21
RIF1-204ENST00000430328 DNMBPQ6XZF7 1577 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 GRIN2DO15399 1336 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 UGT2B4P06133 528 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 TSPAN8P19075 237 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 HTR1BP28222 390 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 PPP1R15BQ5SWA1 713 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 FAM83HQ6ZRV2 1179 aaPredicted RBP16.35■□□□□ 0.21
RIF1-204ENST00000430328 CREB3L1Q96BA8 519 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 AARSD1Q9BTE6 412 aaKnown RBP16.35■□□□□ 0.21
RIF1-204ENST00000430328 BRD7Q9NPI1 651 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 DNMT3LQ9UJW3 386 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 MAPKBP1O60336 1514 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 URB1O60287 2271 aaKnown RBP16.35■□□□□ 0.21
RIF1-204ENST00000430328 ELOVL7A1L3X0 281 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 HYKKA2RU49 373 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 FGF10O15520 208 aaPredicted RBP16.35■□□□□ 0.21
RIF1-204ENST00000430328 ST3GAL4Q11206 333 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 ELAVL2Q12926 359 aaKnown RBP16.35■□□□□ 0.21
RIF1-204ENST00000430328 PITRM1Q5JRX3 1037 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 MCOLN2Q8IZK6 566 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 CRYBG2Q8N1P7 616 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 C11orf16Q9NQ32 467 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 KANSL3Q9P2N6 904 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 CFL2Q9Y281 166 aa16.35■□□□□ 0.21
RIF1-204ENST00000430328 APOC4-APOC2K7ER74 178 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 ITGA10O75578 1167 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 GABBR2O75899 941 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 APOC2P02655 101 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 GNB3P16520 340 aa16.34■□□□□ 0.21
RIF1-204ENST00000430328 GRK6P43250 576 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms