RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 ARRDC2Q8TBH0 407 aa12.94□□□□□ -0.34
HLA-F-219ENST00000429294 BTBD6Q96KE9 485 aa12.94□□□□□ -0.34
HLA-F-219ENST00000429294 C9orf72Q96LT7 481 aa12.94□□□□□ -0.34
HLA-F-219ENST00000429294 TGM7Q96PF1 710 aa12.94□□□□□ -0.34
HLA-F-219ENST00000429294 PLEKHG4BQ96PX9 1271 aa12.94□□□□□ -0.34
HLA-F-219ENST00000429294 ZNF670Q9BS34 389 aa12.94□□□□□ -0.34
HLA-F-219ENST00000429294 ZSCAN5AQ9BUG6 496 aa12.94□□□□□ -0.34
HLA-F-219ENST00000429294 SPATA16Q9BXB7 569 aa12.94□□□□□ -0.34
HLA-F-219ENST00000429294 THAP2Q9H0W7 228 aa12.94□□□□□ -0.34
HLA-F-219ENST00000429294 ZFYVE1Q9HBF4 777 aa12.94□□□□□ -0.34
HLA-F-219ENST00000429294 TRIM39Q9HCM9 518 aa12.94□□□□□ -0.34
HLA-F-219ENST00000429294 ATXN10Q9UBB4 475 aa12.94□□□□□ -0.34
HLA-F-219ENST00000429294 PCYT1BQ9Y5K3 369 aaPredicted RBP12.94□□□□□ -0.34
HLA-F-219ENST00000429294 KMOO15229 486 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 MBD3O95983 291 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 SERPINC1P01008 464 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 C9P02748 559 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 MT-ND3P03897 115 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 HLA-DQB2P05538 268 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 CD48P09326 243 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 ZNF8P17098 575 aaPredicted RBP12.93□□□□□ -0.34
HLA-F-219ENST00000429294 CD86P42081 329 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 SEPHS1P49903 392 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 GFERP55789 205 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 UBE2IP63279 158 aaKnown RBP12.93□□□□□ -0.34
HLA-F-219ENST00000429294 NIPAL4Q0D2K0 466 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 DPYSL3Q14195 570 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 NFKBIBQ15653 356 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 QPCTQ16769 361 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 ANO6Q4KMQ2 910 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 PDPK2PQ6A1A2 396 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 CCDC70Q6NSX1 233 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 TCTN3Q6NUS6 607 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 RBM12BQ8IXT5 1001 aaKnown RBP12.93□□□□□ -0.34
HLA-F-219ENST00000429294 CCDC13Q8IYE1 715 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 GALNT6Q8NCL4 622 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 FAM71BQ8TC56 605 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 ZDHHC12Q96GR4 267 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 OR6C1Q96RD1 312 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 WDR24Q96S15 920 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 BPIFA3Q9BQP9 254 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 SIDT1Q9NXL6 827 aaKnown RBP12.93□□□□□ -0.34
HLA-F-219ENST00000429294 LNPEPQ9UIQ6 1025 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 CROTQ9UKG9 612 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 TP53TG5Q9Y2B4 290 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 KCNMB2Q9Y691 235 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 RELNP78509 3460 aa12.93□□□□□ -0.34
HLA-F-219ENST00000429294 A0A1B0GTH6 734 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 RFPL1O75677 317 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 KIAA0754O94854 1291 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 NDUFA10O95299 355 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 JCHAINP01591 159 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 CYP1A2P05177 515 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 KRT7P08729 469 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 VCLP18206 1134 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 IDSP22304 550 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 ERV3-1Q14264 604 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 IHHQ14623 411 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 FIGNQ5HY92 759 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 ATP1A1-AS1Q5TC04 95 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 ALS2CLQ60I27 953 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 CRTC3Q6UUV7 619 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 LRRTM4Q86VH4 590 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 SEC14L1Q92503 715 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 SYN2Q92777 582 aaPredicted RBP12.92□□□□□ -0.34
HLA-F-219ENST00000429294 HDAC11Q96DB2 347 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 CXorf40BQ96DE9 158 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 TIMM29Q9BSF4 260 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 ZNF768Q9H5H4 540 aaKnown RBP12.92□□□□□ -0.34
HLA-F-219ENST00000429294 ARFGAP3Q9NP61 516 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 POT1Q9NUX5 634 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 LCMT1Q9UIC8 334 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 PADI1Q9ULC6 663 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 PLAAQ9Y263 795 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 MAN2B2Q9Y2E5 1009 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 DNAJC16Q9Y2G8 782 aa12.92□□□□□ -0.34
HLA-F-219ENST00000429294 MRPS18BQ9Y676 258 aaKnown RBP12.92□□□□□ -0.34
HLA-F-219ENST00000429294 UTP20O75691 2785 aaKnown RBP12.91□□□□□ -0.34
HLA-F-219ENST00000429294 PIPSLA2A3N6 862 aa12.91□□□□□ -0.34
HLA-F-219ENST00000429294 CDC14CA4D256 554 aa12.91□□□□□ -0.34
HLA-F-219ENST00000429294 SERPING1P05155 500 aa12.91□□□□□ -0.34
HLA-F-219ENST00000429294 ZNF7P17097 686 aaPredicted RBP12.91□□□□□ -0.34
HLA-F-219ENST00000429294 F8A1P23610 371 aa12.91□□□□□ -0.34
HLA-F-219ENST00000429294 CASP14P31944 242 aa12.91□□□□□ -0.34
HLA-F-219ENST00000429294 SLC19A1P41440 591 aa12.91□□□□□ -0.34
HLA-F-219ENST00000429294 ARSEP51690 589 aa12.91□□□□□ -0.34
HLA-F-219ENST00000429294 DCDC1P59894 354 aa12.91□□□□□ -0.34
HLA-F-219ENST00000429294 SEPT7Q16181 437 aaKnown RBP12.91□□□□□ -0.34
HLA-F-219ENST00000429294 CACHD1Q5VU97 1274 aa12.91□□□□□ -0.34
HLA-F-219ENST00000429294 ASB18Q6ZVZ8 466 aa12.91□□□□□ -0.34
HLA-F-219ENST00000429294 PPP1R3BQ86XI6 285 aa12.91□□□□□ -0.34
HLA-F-219ENST00000429294 TRAM1L1Q8N609 369 aa12.91□□□□□ -0.34
HLA-F-219ENST00000429294 EFCAB3Q8N7B9 438 aa12.91□□□□□ -0.34
HLA-F-219ENST00000429294 GLYATL1Q969I3 302 aa12.91□□□□□ -0.34
HLA-F-219ENST00000429294 MIB2Q96AX9 1013 aa12.91□□□□□ -0.34
HLA-F-219ENST00000429294 ELMO2Q96JJ3 720 aa12.91□□□□□ -0.34
HLA-F-219ENST00000429294 SRPK1Q96SB4 655 aaKnown RBP12.91□□□□□ -0.34
HLA-F-219ENST00000429294 GPR63Q9BZJ6 419 aa12.91□□□□□ -0.34
HLA-F-219ENST00000429294 TWSG1Q9GZX9 223 aa12.91□□□□□ -0.34
HLA-F-219ENST00000429294 LRRC4CQ9HCJ2 640 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms