RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 SCHIP1Q9P0W5 487 aaPredicted RBP18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 ATXN10Q9UBB4 475 aa18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 VPS4AQ9UN37 437 aa18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 SLC30A1Q9Y6M5 507 aa18.06■□□□□ 0.48
UPK3BP1-201ENST00000428678 TNRC6AQ8NDV7 1962 aaKnown RBP18.05■□□□□ 0.48
UPK3BP1-201ENST00000428678 MATN3O15232 486 aa18.05■□□□□ 0.48
UPK3BP1-201ENST00000428678 MTA2O94776 668 aa18.05■□□□□ 0.48
UPK3BP1-201ENST00000428678 CCNYL3P0C7X3 344 aa18.05■□□□□ 0.48
UPK3BP1-201ENST00000428678 CASP14P31944 242 aa18.05■□□□□ 0.48
UPK3BP1-201ENST00000428678 RPL26P61254 145 aaKnown RBP18.05■□□□□ 0.48
UPK3BP1-201ENST00000428678 KLHL30Q0D2K2 578 aa18.05■□□□□ 0.48
UPK3BP1-201ENST00000428678 GALNT2Q10471 571 aa18.05■□□□□ 0.48
UPK3BP1-201ENST00000428678 PIGHQ14442 188 aaPredicted RBP18.05■□□□□ 0.48
UPK3BP1-201ENST00000428678 PLA2G4EQ3MJ16 856 aa18.05■□□□□ 0.48
UPK3BP1-201ENST00000428678 TDRD12Q587J7 1177 aaKnown RBP18.05■□□□□ 0.48
UPK3BP1-201ENST00000428678 ANKRD20A8PQ5CZ79 823 aa18.05■□□□□ 0.48
UPK3BP1-201ENST00000428678 ZNF648Q5T619 568 aaPredicted RBP18.05■□□□□ 0.48
UPK3BP1-201ENST00000428678 E4F1Q66K89 784 aaPredicted RBP18.05■□□□□ 0.48
UPK3BP1-201ENST00000428678 CRTC3Q6UUV7 619 aa18.05■□□□□ 0.48
UPK3BP1-201ENST00000428678 SASS6Q6UVJ0 657 aa18.05■□□□□ 0.48
UPK3BP1-201ENST00000428678 AOPEPQ8N6M6 819 aa18.05■□□□□ 0.48
UPK3BP1-201ENST00000428678 MAML1Q92585 1016 aa18.05■□□□□ 0.48
UPK3BP1-201ENST00000428678 LYSMD1Q96S90 227 aa18.05■□□□□ 0.48
UPK3BP1-201ENST00000428678 ZNF768Q9H5H4 540 aaKnown RBP18.05■□□□□ 0.48
UPK3BP1-201ENST00000428678 PLEKHB1Q9UF11 243 aaPredicted RBP18.05■□□□□ 0.48
UPK3BP1-201ENST00000428678 RPL26L1Q9UNX3 145 aaKnown RBP18.05■□□□□ 0.48
UPK3BP1-201ENST00000428678 RGSL1A5PLK6 1076 aa18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 TTLL8A6PVC2 850 aa18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 PDZK1P1A8MUH7 402 aa18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 TOX3O15405 576 aaPredicted RBP18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 KIF1CO43896 1103 aaKnown RBP18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 CREG1O75629 220 aa18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 XRCC1P18887 633 aaPredicted RBP18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 GNLYP22749 145 aa18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 SLC19A1P41440 591 aa18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 SSR1P43307 286 aaKnown RBP18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 CLCNKAP51800 687 aa18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 SLC25A11Q02978 314 aaKnown RBP18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 NIPAL4Q0D2K0 466 aa18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 DNASE1L3Q13609 305 aa18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 SEPT7Q16181 437 aaKnown RBP18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 STX1AQ16623 288 aa18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 QPCTQ16769 361 aa18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 INSCQ1MX18 579 aa18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 ZNF569Q5MCW4 686 aa18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 RBM43Q6ZSC3 357 aaKnown RBP18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 ARRDC2Q8TBH0 407 aa18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 BTBD6Q96KE9 485 aa18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 SPATA16Q9BXB7 569 aa18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 HSD3B7Q9H2F3 369 aa18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 AIPL1Q9NZN9 384 aa18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 RCOR3Q9P2K3 495 aaPredicted RBP18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 AMACRQ9UHK6 382 aa18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 PADI1Q9ULC6 663 aa18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 DNAJC16Q9Y2G8 782 aa18.04■□□□□ 0.48
UPK3BP1-201ENST00000428678 SPAG6O75602 509 aa18.03■□□□□ 0.48
UPK3BP1-201ENST00000428678 DNAJB5O75953 348 aa18.03■□□□□ 0.48
UPK3BP1-201ENST00000428678 SLC25A14O95258 325 aaPredicted RBP18.03■□□□□ 0.48
UPK3BP1-201ENST00000428678 PDGFAP04085 211 aa18.03■□□□□ 0.48
UPK3BP1-201ENST00000428678 HLA-DQB2P05538 268 aa18.03■□□□□ 0.48
UPK3BP1-201ENST00000428678 CD48P09326 243 aa18.03■□□□□ 0.48
UPK3BP1-201ENST00000428678 IL4RP24394 825 aa18.03■□□□□ 0.48
UPK3BP1-201ENST00000428678 PRKCIP41743 596 aa18.03■□□□□ 0.48
UPK3BP1-201ENST00000428678 FHL5Q5TD97 284 aa18.03■□□□□ 0.48
UPK3BP1-201ENST00000428678 CACHD1Q5VU97 1274 aa18.03■□□□□ 0.48
UPK3BP1-201ENST00000428678 ALS2CLQ60I27 953 aa18.03■□□□□ 0.48
UPK3BP1-201ENST00000428678 CAPRIN2Q6IMN6 1127 aaKnown RBP18.03■□□□□ 0.48
UPK3BP1-201ENST00000428678 PPP1R3BQ86XI6 285 aa18.03■□□□□ 0.48
UPK3BP1-201ENST00000428678 CT55Q8WUE5 264 aa18.03■□□□□ 0.48
UPK3BP1-201ENST00000428678 LRRN4Q8WUT4 740 aa18.03■□□□□ 0.48
UPK3BP1-201ENST00000428678 RSC1A1Q92681 617 aa18.03■□□□□ 0.48
UPK3BP1-201ENST00000428678 MLPHQ9BV36 600 aaPredicted RBP18.03■□□□□ 0.48
UPK3BP1-201ENST00000428678 ZNF624Q9P2J8 865 aaPredicted RBP18.03■□□□□ 0.48
UPK3BP1-201ENST00000428678 SLC23A2Q9UGH3 650 aa18.03■□□□□ 0.48
UPK3BP1-201ENST00000428678 PCDHGA6Q9Y5G7 932 aa18.03■□□□□ 0.48
UPK3BP1-201ENST00000428678 ADGRG1Q9Y653 693 aa18.03■□□□□ 0.48
UPK3BP1-201ENST00000428678 HIVEP3Q5T1R4 2406 aa18.02■□□□□ 0.48
UPK3BP1-201ENST00000428678 SLC4A1P02730 911 aa18.02■□□□□ 0.48
UPK3BP1-201ENST00000428678 FGF5P12034 268 aa18.02■□□□□ 0.48
UPK3BP1-201ENST00000428678 SKILP12757 684 aa18.02■□□□□ 0.48
UPK3BP1-201ENST00000428678 CAPZBP47756 277 aa18.02■□□□□ 0.48
UPK3BP1-201ENST00000428678 IFI16Q16666 785 aaKnown RBP18.02■□□□□ 0.48
UPK3BP1-201ENST00000428678 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.02■□□□□ 0.48
UPK3BP1-201ENST00000428678 NCBP2-AS2Q69YL0 99 aa18.02■□□□□ 0.48
UPK3BP1-201ENST00000428678 IRGCQ6NXR0 463 aa18.02■□□□□ 0.48
UPK3BP1-201ENST00000428678 FAM92BQ6ZTR7 304 aa18.02■□□□□ 0.48
UPK3BP1-201ENST00000428678 PRSS42Q7Z5A4 293 aa18.02■□□□□ 0.48
UPK3BP1-201ENST00000428678 ADGRG6Q86SQ4 1221 aa18.02■□□□□ 0.48
UPK3BP1-201ENST00000428678 APLFQ8IW19 511 aaPredicted RBP18.02■□□□□ 0.48
UPK3BP1-201ENST00000428678 NIPA2Q8N8Q9 360 aa18.02■□□□□ 0.48
UPK3BP1-201ENST00000428678 GALNT11Q8NCW6 608 aa18.02■□□□□ 0.48
UPK3BP1-201ENST00000428678 CPT1CQ8TCG5 803 aa18.02■□□□□ 0.48
UPK3BP1-201ENST00000428678 ISCUQ9H1K1 167 aa18.02■□□□□ 0.48
UPK3BP1-201ENST00000428678 ACTL8Q9H568 366 aa18.02■□□□□ 0.48
UPK3BP1-201ENST00000428678 TRIM39Q9HCM9 518 aa18.02■□□□□ 0.48
UPK3BP1-201ENST00000428678 LMBRD1Q9NUN5 540 aa18.02■□□□□ 0.48
UPK3BP1-201ENST00000428678 IP6K2Q9UHH9 426 aa18.02■□□□□ 0.48
UPK3BP1-201ENST00000428678 ANAPC7Q9UJX3 599 aa18.02■□□□□ 0.48
UPK3BP1-201ENST00000428678 GTF3C3Q9Y5Q9 886 aa18.02■□□□□ 0.48
UPK3BP1-201ENST00000428678 CRYBG3Q68DQ2 2970 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms