RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 MAMLD1Q13495 774 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 PPP2R2DQ66LE6 453 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 RNF43Q68DV7 783 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 NAIF1Q69YI7 327 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-208ENST00000428599 DENND5AQ6IQ26 1287 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 PRICKLE1Q96MT3 831 aaPredicted RBP8.89□□□□□ -0.99
CTNND1-208ENST00000428599 DNAJC18Q9H819 358 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 MOCS1Q9NZB8 636 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 COL20A1Q9P218 1284 aa8.89□□□□□ -0.99
CTNND1-208ENST00000428599 H3BQF6 201 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 TRAFD1O14545 582 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-208ENST00000428599 CASKO14936 926 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 PLOD3O60568 738 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 ZNF823P16415 610 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 ATP5A1P25705 553 aaKnown RBP8.88□□□□□ -0.99
CTNND1-208ENST00000428599 CORO1AP31146 461 aaKnown RBP8.88□□□□□ -0.99
CTNND1-208ENST00000428599 MAPK14Q16539 360 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 NRF1Q16656 503 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 ZIK1Q3SY52 487 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-208ENST00000428599 OR6K2Q8NGY2 324 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 PIWIL2Q8TC59 973 aaKnown RBP8.88□□□□□ -0.99
CTNND1-208ENST00000428599 SNX33Q8WV41 574 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 LRRC46Q96FV0 321 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 RNF157Q96PX1 679 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 EBNA1BP2Q99848 306 aaKnown RBP8.88□□□□□ -0.99
CTNND1-208ENST00000428599 TRIM39Q9HCM9 518 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 CALML5Q9NZT1 146 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 XPR1Q9UBH6 696 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 GRIP1Q9Y3R0 1128 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 LCA5LO95447 670 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 UGT2B4P06133 528 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 COX4I1P13073 169 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 MATKP42679 507 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 BRCC3P46736 316 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 CDK9P50750 372 aaKnown RBP8.88□□□□□ -0.99
CTNND1-208ENST00000428599 CRADDP78560 199 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 GAD2Q05329 585 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 PRKCZQ05513 592 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 MED22Q15528 200 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 ARSHQ5FYA8 562 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 LCN1P1Q5VSP4 162 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 LIPMQ5VYY2 423 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 SLC30A6Q6NXT4 461 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 SCIMPQ6UWF3 145 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 VSTM1Q6UX27 236 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 THAP5Q7Z6K1 395 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 RANBP3LQ86VV4 465 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-208ENST00000428599 LRRC52Q8N7C0 313 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 ACMSDQ8TDX5 336 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 TNFRSF25Q93038 417 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 MNTQ99583 582 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 HMGXB4Q9UGU5 601 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 RAP2CQ9Y3L5 183 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 DLG5Q8TDM6 1919 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 A0A1W2PQH9 124 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 SOWAHBA6NEL2 793 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 LOC110117498-PIK3R3F6TDL0 507 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 H3BUI4 141 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 NOL4O94818 638 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 SERPINA3P01011 423 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 SMPD1P17405 629 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 CTSOP43234 321 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-208ENST00000428599 PCDH1Q08174 1060 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 SPDYCQ5MJ68 293 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 THOC7Q6I9Y2 204 aaKnown RBP8.88□□□□□ -0.99
CTNND1-208ENST00000428599 PYHIN1Q6K0P9 492 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 ERICH5Q6P6B1 374 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 POTEHQ6S545 545 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 SAPCD2Q86UD0 394 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 FBXW8Q8N3Y1 598 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 FBXO15Q8NCQ5 510 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-208ENST00000428599 CLEC4DQ8WXI8 215 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 PIK3R3Q92569 461 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 HDAC10Q969S8 669 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 FCRL2Q96LA5 508 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-208ENST00000428599 CERS4Q9HA82 394 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 OSER1Q9NX31 292 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 TAS2R14Q9NYV8 317 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 DDX20Q9UHI6 824 aaKnown RBP8.88□□□□□ -0.99
CTNND1-208ENST00000428599 LRCH1Q9Y2L9 728 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 OAS3Q9Y6K5 1087 aaKnown RBP8.88□□□□□ -0.99
CTNND1-208ENST00000428599 CLDN5O00501 218 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 SLC22A3O75751 556 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 GOT1P17174 413 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 FNBP1LQ5T0N5 605 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 BICRALQ6AI39 1079 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 CROCCP3Q8IVE0 287 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 KBTBD2Q8IY47 623 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 TRPV1Q8NER1 839 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 TSTD1Q8NFU3 115 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 OR52K2Q8NGK3 314 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 ARNTL2Q8WYA1 636 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 COMMD4Q9H0A8 199 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 SRMSQ9H3Y6 488 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 NKIRAS2Q9NYR9 191 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 SNX7Q9UNH6 387 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 CICQ96RK0 1608 aaPredicted RBP8.88□□□□□ -0.99
CTNND1-208ENST00000428599 NPEPPSL1A6NEC2 478 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 CAPN14A8MX76 684 aa8.88□□□□□ -0.99
CTNND1-208ENST00000428599 MDM4O15151 490 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms