RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 A8MUI8 341 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 BTBD19C9JJ37 291 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 LOC110117498-PIK3R3F6TDL0 507 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 AXIN1O15169 862 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 PMM2O15305 246 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 RB1P06400 928 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 DPP6P42658 865 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 CTBP2P56545 445 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 ARF3P61204 181 aaPredicted RBP5.7□□□□□ -1.5
HERC4-206ENST00000427635 ARF1P84077 181 aaKnown RBP5.7□□□□□ -1.5
HERC4-206ENST00000427635 CBLBQ13191 982 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 BRMS1LQ5PSV4 323 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 PRPF38BQ5VTL8 546 aaKnown RBP5.7□□□□□ -1.5
HERC4-206ENST00000427635 TMC5Q6UXY8 1006 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 FMR1NBQ8N0W7 255 aaPredicted RBP5.7□□□□□ -1.5
HERC4-206ENST00000427635 OR2L3Q8NG85 312 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 PIK3R3Q92569 461 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 COPS5Q92905 334 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 COMMD4Q9H0A8 199 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 C8orf4Q9NR00 106 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 CALML5Q9NZT1 146 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 CA14Q9ULX7 337 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 USP31Q70CQ4 1352 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 ATXN2Q99700 1313 aaKnown RBP5.7□□□□□ -1.5
HERC4-206ENST00000427635 CASZ1Q86V15 1759 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 ATP6V1G1O75348 118 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 PROSCO94903 275 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 EOMESO95936 686 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 MT-CO1P00395 513 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 ERBB2P04626 1255 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 SLC6A2P23975 617 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 CCNFP41002 786 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 CASP5P51878 434 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 RPS3AP61247 264 aaKnown RBP5.7□□□□□ -1.5
HERC4-206ENST00000427635 GALK2Q01415 458 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 PRKCZQ05513 592 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 TLR1Q15399 786 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 PARP15Q460N3 678 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 TMEM35AQ53FP2 167 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 ZNF776Q68DI1 518 aaPredicted RBP5.7□□□□□ -1.5
HERC4-206ENST00000427635 ZNF730Q6ZMV8 503 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 SYVN1Q86TM6 617 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 RANBP3LQ86VV4 465 aaPredicted RBP5.7□□□□□ -1.5
HERC4-206ENST00000427635 TMEM192Q8IY95 271 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 SPATA4Q8NEY3 305 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 NUS1Q96E22 293 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 SEMA3CQ99985 751 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 TBL1XR1Q9BZK7 514 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 OBP2AQ9NY56 170 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 MED31Q9Y3C7 131 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 ASB3Q9Y575 518 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 QRICH2Q9H0J4 1663 aa5.7□□□□□ -1.5
HERC4-206ENST00000427635 A0A1W2PQ45 241 aaPredicted RBP5.69□□□□□ -1.5
HERC4-206ENST00000427635 A0A1W2PQY0 241 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 H0YJX3 145 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 FFAR2O15552 330 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 OR1F1O43749 312 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 OR10H3O60404 316 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 SMNDC1O75940 238 aaKnown RBP eCLIP5.69□□□□□ -1.5
HERC4-206ENST00000427635 TNFAIP8O95379 198 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 CHRNA1P02708 482 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 NTRK1P04629 796 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 DBIP07108 87 aaKnown RBP5.69□□□□□ -1.5
HERC4-206ENST00000427635 PF4V1P10720 104 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 ZNF20P17024 532 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 HSD11B1P28845 292 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 HSD17B2P37059 387 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 ERFP50548 548 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 ZNF41P51814 821 aaPredicted RBP5.69□□□□□ -1.5
HERC4-206ENST00000427635 PNLIPRP1P54315 467 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 DSG1Q02413 1049 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 PPP3CAQ08209 521 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 TOP3AQ13472 1001 aaPredicted RBP5.69□□□□□ -1.5
HERC4-206ENST00000427635 TIMM50Q3ZCQ8 353 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 EIPR1Q53HC9 387 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 DCST1Q5T197 706 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 METTL11BQ5VVY1 283 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 SYCE2Q6PIF2 218 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 SHC4Q6S5L8 630 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 HFE2Q6ZVN8 426 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 PTF1AQ7RTS3 328 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 ADGRG6Q86SQ4 1221 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 SLC47A2Q86VL8 602 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 SLC41A1Q8IVJ1 513 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 CEP97Q8IW35 865 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 SNX33Q8WV41 574 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 DLG3Q92796 817 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 NARS2Q96I59 477 aaKnown RBP5.69□□□□□ -1.5
HERC4-206ENST00000427635 TIGARQ9NQ88 270 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 PCDHB1Q9Y5F3 818 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 CNTNAP1P78357 1384 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 PNMA8CA0A1B0GUJ8 204 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 EIF3FO00303 357 aaPredicted RBP5.69□□□□□ -1.5
HERC4-206ENST00000427635 MED26O95402 600 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 SAGP10523 405 aaPredicted RBP5.69□□□□□ -1.5
HERC4-206ENST00000427635 LBX1P52954 281 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 RPL6Q02878 288 aaKnown RBP5.69□□□□□ -1.5
HERC4-206ENST00000427635 EPS8Q12929 822 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 TRIM16LQ309B1 348 aa5.69□□□□□ -1.5
HERC4-206ENST00000427635 ISLR2Q6UXK2 745 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms