RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 EPHA6Q9UF33 1036 aa16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 ZNF451Q9Y4E5 1061 aa16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 ABCA12Q86UK0 2595 aa16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 ZNF106Q9H2Y7 1883 aaKnown RBP16.49■□□□□ 0.23
CHCHD3-202ENST00000423635 FADS2P1A8MWK0 482 aa16.48■□□□□ 0.23
CHCHD3-202ENST00000423635 LRCH4O75427 683 aa16.48■□□□□ 0.23
CHCHD3-202ENST00000423635 LDLRP01130 860 aa16.48■□□□□ 0.23
CHCHD3-202ENST00000423635 VIPP01282 170 aa16.48■□□□□ 0.23
CHCHD3-202ENST00000423635 ATP1A3P13637 1013 aa16.48■□□□□ 0.23
CHCHD3-202ENST00000423635 NELFEP18615 380 aaKnown RBP16.48■□□□□ 0.23
CHCHD3-202ENST00000423635 AMPD1P23109 780 aa16.48■□□□□ 0.23
CHCHD3-202ENST00000423635 IHHQ14623 411 aa16.48■□□□□ 0.23
CHCHD3-202ENST00000423635 CHRNA6Q15825 494 aa16.48■□□□□ 0.23
CHCHD3-202ENST00000423635 CACHD1Q5VU97 1274 aa16.48■□□□□ 0.23
CHCHD3-202ENST00000423635 CPZQ66K79 652 aa16.48■□□□□ 0.23
CHCHD3-202ENST00000423635 TMCO3Q6UWJ1 677 aa16.48■□□□□ 0.23
CHCHD3-202ENST00000423635 POLNQ7Z5Q5 900 aa16.48■□□□□ 0.23
CHCHD3-202ENST00000423635 BPHLQ86WA6 291 aaPredicted RBP16.48■□□□□ 0.23
CHCHD3-202ENST00000423635 HPS6Q86YV9 775 aa16.48■□□□□ 0.23
CHCHD3-202ENST00000423635 RUFY1Q96T51 708 aa16.48■□□□□ 0.23
CHCHD3-202ENST00000423635 SLC29A3Q9BZD2 475 aa16.48■□□□□ 0.23
CHCHD3-202ENST00000423635 FAM83DQ9H4H8 585 aa16.48■□□□□ 0.23
CHCHD3-202ENST00000423635 PDE7BQ9NP56 450 aa16.48■□□□□ 0.23
CHCHD3-202ENST00000423635 KLC4Q9NSK0 619 aa16.48■□□□□ 0.23
CHCHD3-202ENST00000423635 ATXN10Q9UBB4 475 aa16.48■□□□□ 0.23
CHCHD3-202ENST00000423635 ERRFI1Q9UJM3 462 aaPredicted RBP16.48■□□□□ 0.23
CHCHD3-202ENST00000423635 CSMD1Q96PZ7 3565 aa16.48■□□□□ 0.23
CHCHD3-202ENST00000423635 RGSL1A5PLK6 1076 aa16.47■□□□□ 0.23
CHCHD3-202ENST00000423635 H3BRJ5 948 aa16.47■□□□□ 0.23
CHCHD3-202ENST00000423635 RASSF9O75901 435 aa16.47■□□□□ 0.23
CHCHD3-202ENST00000423635 PRLP01236 227 aa16.47■□□□□ 0.23
CHCHD3-202ENST00000423635 ZNF8P17098 575 aaPredicted RBP16.47■□□□□ 0.23
CHCHD3-202ENST00000423635 LPOP22079 712 aaPredicted RBP16.47■□□□□ 0.23
CHCHD3-202ENST00000423635 CES1P23141 567 aa16.47■□□□□ 0.23
CHCHD3-202ENST00000423635 SPINT3P49223 89 aa16.47■□□□□ 0.23
CHCHD3-202ENST00000423635 EPHB1P54762 984 aa16.47■□□□□ 0.23
CHCHD3-202ENST00000423635 UBE2HP62256 183 aa16.47■□□□□ 0.23
CHCHD3-202ENST00000423635 RPS15P62841 145 aaKnown RBP16.47■□□□□ 0.23
CHCHD3-202ENST00000423635 DPYSL2Q16555 572 aa16.47■□□□□ 0.23
CHCHD3-202ENST00000423635 PRR30Q53SZ7 412 aaPredicted RBP16.47■□□□□ 0.23
CHCHD3-202ENST00000423635 FKBP15Q5T1M5 1219 aa16.47■□□□□ 0.23
CHCHD3-202ENST00000423635 ALG1LQ6GMV1 187 aa16.47■□□□□ 0.23
CHCHD3-202ENST00000423635 PWWP2BQ6NUJ5 590 aa16.47■□□□□ 0.23
CHCHD3-202ENST00000423635 PPP1R2P3Q6NXS1 205 aa16.47■□□□□ 0.23
CHCHD3-202ENST00000423635 ATPAF2Q8N5M1 289 aa16.47■□□□□ 0.23
CHCHD3-202ENST00000423635 ZDHHC12Q96GR4 267 aa16.47■□□□□ 0.23
CHCHD3-202ENST00000423635 TCTN2Q96GX1 697 aa16.47■□□□□ 0.23
CHCHD3-202ENST00000423635 NT5MQ9NPB1 228 aa16.47■□□□□ 0.23
CHCHD3-202ENST00000423635 TAS2R14Q9NYV8 317 aa16.47■□□□□ 0.23
CHCHD3-202ENST00000423635 FARSAQ9Y285 508 aaKnown RBP16.47■□□□□ 0.23
CHCHD3-202ENST00000423635 ANKRD17O75179 2603 aaKnown RBP16.47■□□□□ 0.23
CHCHD3-202ENST00000423635 ARGFXA6NJG6 315 aa16.46■□□□□ 0.23
CHCHD3-202ENST00000423635 GPR89AB7ZAQ6 455 aa16.46■□□□□ 0.23
CHCHD3-202ENST00000423635 DPM1O60762 260 aa16.46■□□□□ 0.23
CHCHD3-202ENST00000423635 GPR89BP0CG08 455 aa16.46■□□□□ 0.23
CHCHD3-202ENST00000423635 TNFRSF8P28908 595 aa16.46■□□□□ 0.23
CHCHD3-202ENST00000423635 ARL4AP40617 200 aa16.46■□□□□ 0.23
CHCHD3-202ENST00000423635 CAPZBP47756 277 aa16.46■□□□□ 0.23
CHCHD3-202ENST00000423635 RPL26P61254 145 aaKnown RBP16.46■□□□□ 0.23
CHCHD3-202ENST00000423635 CHAF1BQ13112 559 aa16.46■□□□□ 0.23
CHCHD3-202ENST00000423635 KRT31Q15323 416 aa16.46■□□□□ 0.23
CHCHD3-202ENST00000423635 FAM199XQ6PEV8 388 aaPredicted RBP16.46■□□□□ 0.23
CHCHD3-202ENST00000423635 ABRAXAS1Q6UWZ7 409 aa16.46■□□□□ 0.23
CHCHD3-202ENST00000423635 LRRC49Q8IUZ0 686 aa16.46■□□□□ 0.23
CHCHD3-202ENST00000423635 RBM12BQ8IXT5 1001 aaKnown RBP16.46■□□□□ 0.23
CHCHD3-202ENST00000423635 RSC1A1Q92681 617 aa16.46■□□□□ 0.23
CHCHD3-202ENST00000423635 SLC41A2Q96JW4 573 aa16.46■□□□□ 0.23
CHCHD3-202ENST00000423635 TDRD1Q9BXT4 1180 aaKnown RBP16.46■□□□□ 0.23
CHCHD3-202ENST00000423635 POLR1EQ9GZS1 481 aaKnown RBP16.46■□□□□ 0.23
CHCHD3-202ENST00000423635 TRIM39Q9HCM9 518 aa16.46■□□□□ 0.23
CHCHD3-202ENST00000423635 SLC40A1Q9NP59 571 aa16.46■□□□□ 0.23
CHCHD3-202ENST00000423635 SLAMF7Q9NQ25 335 aa16.46■□□□□ 0.23
CHCHD3-202ENST00000423635 POT1Q9NUX5 634 aa16.46■□□□□ 0.23
CHCHD3-202ENST00000423635 RARRES3Q9UL19 164 aa16.46■□□□□ 0.23
CHCHD3-202ENST00000423635 RPL26L1Q9UNX3 145 aaKnown RBP16.46■□□□□ 0.23
CHCHD3-202ENST00000423635 CHKBQ9Y259 395 aa16.46■□□□□ 0.23
CHCHD3-202ENST00000423635 CHUKO15111 745 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 POU3F2P20265 443 aaPredicted RBP16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 PCK1P35558 622 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 RPS18P62269 152 aaKnown RBP16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 IL10RAQ13651 578 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 BOLA3Q53S33 107 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 CDKAL1Q5VV42 579 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 C1QL3Q5VWW1 255 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 ZNF517Q6ZMY9 492 aaPredicted RBP16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 TRIM48Q8IWZ4 208 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 NEK11Q8NG66 645 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 PNPLA2Q96AD5 504 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 CSPG4P5Q96PW8 444 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 SYT11Q9BT88 431 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 TRIM7Q9C029 511 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 OSGEPL1Q9H4B0 414 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 SLC23A2Q9UGH3 650 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 CBX6O95503 412 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 TPM2P07951 284 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 BRAFP15056 766 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 FOLR1P15328 257 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 ELAVL4P26378 380 aaKnown RBP16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 IL1R2P27930 398 aa16.45■□□□□ 0.22
CHCHD3-202ENST00000423635 SERPINB6P35237 376 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms