RNA–Protein interactions for RNA: ENST00000419470.6

SFTPA1-202, Transcript of surfactant protein A1, humanhuman

TSL 1 (best) BASIC

Gene SFTPA1, Length 2,210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-202ENST00000419470 CNDP2Q96KP4 475 aaKnown RBP13.24□□□□□ -0.29
SFTPA1-202ENST00000419470 UHRF1Q96T88 793 aaPredicted RBP13.24□□□□□ -0.29
SFTPA1-202ENST00000419470 MROQ9BYG7 248 aa13.24□□□□□ -0.29
SFTPA1-202ENST00000419470 NDEL1Q9GZM8 345 aa13.24□□□□□ -0.29
SFTPA1-202ENST00000419470 SEMA6AQ9H2E6 1030 aa13.24□□□□□ -0.29
SFTPA1-202ENST00000419470 SFXN1Q9H9B4 322 aa13.24□□□□□ -0.29
SFTPA1-202ENST00000419470 COPG2Q9UBF2 871 aa13.24□□□□□ -0.29
SFTPA1-202ENST00000419470 ZMYM5Q9UJ78 669 aa13.24□□□□□ -0.29
SFTPA1-202ENST00000419470 CORINQ9Y5Q5 1042 aa13.24□□□□□ -0.29
SFTPA1-202ENST00000419470 NOX1Q9Y5S8 564 aa13.24□□□□□ -0.29
SFTPA1-202ENST00000419470 PLOD2O00469 737 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 TRIM38O00635 465 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 CFLARO15519 480 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 ENO3P13929 434 aaPredicted RBP13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 ITGADQ13349 1161 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 RAB39AQ14964 217 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 INSCQ1MX18 579 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 CYP2U1Q7Z449 544 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 CAND1Q86VP6 1230 aaKnown RBP13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 CPXM2Q8N436 756 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 TTC16Q8NEE8 873 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 SH3RF2Q8TEC5 729 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 ACDQ96AP0 544 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 ZSWIM3Q96MP5 696 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 MAGEH1Q9H213 219 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 PRO3102Q9H379 93 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 MRPL40Q9NQ50 206 aaKnown RBP13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 EIF2B3Q9NR50 452 aaKnown RBP13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 TDP1Q9NUW8 608 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 DUS2Q9NX74 493 aaKnown RBP13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 KLHL3Q9UH77 587 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 ERVK-11Q9UQG0 969 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 E2F8A0AVK6 867 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 F5H423 210 aaPredicted RBP13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 J3KR12 359 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 AKAP10O43572 662 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 CEBPBP17676 345 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 MYF6P23409 242 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 ACVRL1P37023 503 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 DPP6P42658 865 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 HNRNPFP52597 415 aaKnown RBP13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 RHDQ02161 417 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 GNA12Q03113 381 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 GRSF1Q12849 480 aaKnown RBP eCLIP13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 NFATC3Q12968 1075 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 PMS2P3Q13401 168 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 ART3Q13508 389 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 ANO4Q32M45 955 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 PPP4R4Q6NUP7 873 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 TRMT10BQ6PF06 316 aaKnown RBP13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 TMEM26Q6ZUK4 368 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 IGFN1Q86VF2 1251 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 CPSF7Q8N684 471 aaKnown RBP13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 RNF148Q8N7C7 305 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 HJURPQ8NCD3 748 aaPredicted RBP13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 LRTOMTQ8WZ04 291 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 TMA16Q96EY4 203 aaKnown RBP13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 SLC29A1Q99808 456 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 EFCAB1Q9HAE3 211 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 DZANK1Q9NVP4 752 aa13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 SUCOQ9UBS9 1254 aaKnown RBP13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 MRPS23Q9Y3D9 190 aaKnown RBP13.23□□□□□ -0.29
SFTPA1-202ENST00000419470 C5orf42Q9H799 3197 aa13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 A0A0D9SEW6 157 aa13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 ILVBLA1L0T0 632 aa13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 CACNG3O60359 315 aa13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 PRAMEF12O95522 483 aa13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 GLP2RO95838 553 aa13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 ALDOAP04075 364 aaKnown RBP13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 ALOX5P09917 674 aa13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 ATXN3P54252 364 aaPredicted RBP13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 ZNF177Q13360 481 aaPredicted RBP13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 LSM12Q3MHD2 195 aaKnown RBP13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 MTX3Q5HYI7 312 aa13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 CXorf57Q6NSI4 855 aaKnown RBP13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 TMEM184AQ6ZMB5 413 aa13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 ZNF534Q76KX8 674 aa13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 ITFG1Q8TB96 612 aa13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 USP33Q8TEY7 942 aa13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 SREK1Q8WXA9 508 aaKnown RBP13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 ING5Q8WYH8 240 aa13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 DUS3LQ96G46 650 aaKnown RBP13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 OR52B2Q96RD2 323 aa13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 ARPC5LQ9BPX5 153 aa13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 TUBA1CQ9BQE3 449 aa13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 IGFLR1Q9H665 355 aa13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 SP110Q9HB58 689 aa13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 DAPK2Q9UIK4 370 aa13.22□□□□□ -0.29
SFTPA1-202ENST00000419470 TPP1O14773 563 aa13.21□□□□□ -0.29
SFTPA1-202ENST00000419470 TBL1XO60907 577 aa13.21□□□□□ -0.29
SFTPA1-202ENST00000419470 HSPA4LO95757 839 aa13.21□□□□□ -0.29
SFTPA1-202ENST00000419470 NFKB1P19838 968 aa13.21□□□□□ -0.29
SFTPA1-202ENST00000419470 CCNA2P20248 432 aa13.21□□□□□ -0.29
SFTPA1-202ENST00000419470 HOXD9P28356 352 aaPredicted RBP13.21□□□□□ -0.29
SFTPA1-202ENST00000419470 PRAMEP78395 509 aa13.21□□□□□ -0.29
SFTPA1-202ENST00000419470 IL10RBQ08334 325 aa13.21□□□□□ -0.29
SFTPA1-202ENST00000419470 ZBTB49Q6ZSB9 765 aa13.21□□□□□ -0.29
SFTPA1-202ENST00000419470 CYS1Q717R9 158 aa13.21□□□□□ -0.29
SFTPA1-202ENST00000419470 PACRGLQ8N7B6 248 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms