RNA–Protein interactions for RNA: ENST00000418646.5

GPCPD1-202, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 4,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-202ENST00000418646 PPP4R1Q8TF05 950 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 TRUB1Q8WWH5 349 aaKnown RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 GFM2Q969S9 779 aaKnown RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 AURKBQ96GD4 344 aaPredicted RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 DHRS1Q96LJ7 313 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 TMEM79Q9BSE2 394 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 GRIP2Q9C0E4 1043 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 PCDHAC1Q9H158 963 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 AGO3Q9H9G7 860 aaKnown RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 ZFYVE28Q9HCC9 887 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 MAGED2Q9UNF1 606 aaPredicted RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 TRPV2Q9Y5S1 764 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 IKBKGQ9Y6K9 419 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 TSPAN11A1L157 253 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 C1orf226A1L170 272 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 TMX2-CTNND1H3BSU7 103 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 PSMD12O00232 456 aaPredicted RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 PDHXO00330 501 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 PPP6CO00743 305 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 SGTAO43765 313 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 KITP10721 976 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 CDH1P12830 882 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 DDX5P17844 614 aaKnown RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 HDCP19113 662 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 HLA-DPA1P20036 260 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 YWHAQP27348 245 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 SHMT2P34897 504 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 SLC15A1P46059 708 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 SLC6A12P48065 614 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 MVDP53602 400 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 SLC5A3P53794 718 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 GP2P55259 537 aaKnown RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 YBEYP58557 167 aaPredicted RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 TPI1P60174 286 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 IFITM3Q01628 133 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 EEF1A2Q05639 463 aaKnown RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 DOC2BQ14184 412 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 RAB39AQ14964 217 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 ZNF829Q3KNS6 432 aaPredicted RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 PPP6R3Q5H9R7 873 aaPredicted RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 RBM48Q5RL73 367 aaKnown RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 SYT6Q5T7P8 510 aaPredicted RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 TMEM150AQ86TG1 271 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 SYVN1Q86TM6 617 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 LACC1Q8IV20 430 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 LRRC56Q8IYG6 542 aaPredicted RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 TERB1Q8NA31 727 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 FBXO22Q8NEZ5 403 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 DNAJB8Q8NHS0 232 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 BRSK1Q8TDC3 778 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 CANT1Q8WVQ1 401 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 HDAC2Q92769 488 aaKnown RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 KCNJ9Q92806 393 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 IGSF8Q969P0 613 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 TESCQ96BS2 214 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 TRMT2BQ96GJ1 504 aaKnown RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 ADI1Q9BV57 179 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 RSPO3Q9BXY4 272 aaPredicted RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 CEP41Q9BYV8 373 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 PAIP1Q9H074 479 aaKnown RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 PREBQ9HCU5 417 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 VCX3AQ9NNX9 186 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 PLCXD1Q9NUJ7 323 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 LHX3Q9UBR4 397 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 EBF1Q9UH73 591 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 SFMBT1Q9UHJ3 866 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 ZNF711Q9Y462 761 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 UGT2A1Q9Y4X1 527 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 PCDHGA4Q9Y5G9 962 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 MYOCOSA0A1B0GUC4 107 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 FAM234BA2RU67 622 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 NEMP2A6NFY4 417 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 FAM220BPB1ANY3 271 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 NOP56O00567 594 aaKnown RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 DUSP11O75319 330 aaKnown RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 RPP40O75818 363 aaKnown RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 FGF1P05230 155 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 KRT19P08727 400 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 USP17L7P0C7H9 530 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 EFNA1P20827 205 aaPredicted RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 MZF1P28698 734 aaPredicted RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 CAPGP40121 348 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 MAP3K7CLP57077 242 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 SESN2P58004 480 aaPredicted RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 PHC1P78364 1004 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 LCP2Q13094 533 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 KEAP1Q14145 624 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 LPIN1Q14693 890 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 TRIP10Q15642 601 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 USP39Q53GS9 565 aaKnown RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 ALFQ53S48 1182 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 CLLU1OSQ5K130 101 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 TMTC4Q5T4D3 741 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 GDF6Q6KF10 455 aaPredicted RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 DCDC5Q6ZRR9 648 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 RAVER1Q8IY67 606 aaKnown RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 TNIP2Q8NFZ5 429 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 GOT1L1Q8NHS2 421 aaPredicted RBP4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 ADAM32Q8TC27 787 aa4.43□□□□□ -1.7
GPCPD1-202ENST00000418646 APH1BQ8WW43 257 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms