RNA–Protein interactions for RNA: ENST00000417833.2

TGFBR3-203, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-203ENST00000417833 SPAM1P38567 509 aa13.11□□□□□ -0.31
TGFBR3-203ENST00000417833 OLIG2Q13516 323 aa13.11□□□□□ -0.31
TGFBR3-203ENST00000417833 PPP1R7Q15435 360 aa13.11□□□□□ -0.31
TGFBR3-203ENST00000417833 DEFB133Q30KQ1 61 aa13.11□□□□□ -0.31
TGFBR3-203ENST00000417833 TTC27Q6P3X3 843 aa13.11□□□□□ -0.31
TGFBR3-203ENST00000417833 OGFOD3Q6PK18 319 aa13.11□□□□□ -0.31
TGFBR3-203ENST00000417833 ZCCHC14Q8WYQ9 949 aaKnown RBP13.11□□□□□ -0.31
TGFBR3-203ENST00000417833 TMEM168Q9H0V1 697 aa13.11□□□□□ -0.31
TGFBR3-203ENST00000417833 CARS2Q9HA77 564 aaKnown RBP13.11□□□□□ -0.31
TGFBR3-203ENST00000417833 TRIM39Q9HCM9 518 aa13.11□□□□□ -0.31
TGFBR3-203ENST00000417833 BPIFA1Q9NP55 256 aa13.11□□□□□ -0.31
TGFBR3-203ENST00000417833 SUFUQ9UMX1 484 aa13.11□□□□□ -0.31
TGFBR3-203ENST00000417833 U3KQA8 63 aa13.11□□□□□ -0.31
TGFBR3-203ENST00000417833 ZNF106Q9H2Y7 1883 aaKnown RBP13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 STX7O15400 261 aaKnown RBP13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 LDB2O43679 373 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 DNAJC6O75061 913 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 RFPL3O75679 317 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 SLC25A14O95258 325 aaPredicted RBP13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 GP1BAP07359 652 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 ETS1P14921 441 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 ADCY8P40145 1251 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 KCNJ1P48048 391 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 POLD2P49005 469 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 RPIAP49247 311 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 FOXC1Q12948 553 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 DNAJC3Q13217 504 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 PEX6Q13608 980 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 PTK6Q13882 451 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 LRP8Q14114 963 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 SPARCL1Q14515 664 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 PYCR3Q53H96 274 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 ALS2CLQ60I27 953 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 DUPD1Q68J44 220 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 GSTA5Q7RTV2 222 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 NRROSQ86YC3 692 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 CACTIN-AS1Q8N1I8 211 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 GLIS1Q8NBF1 620 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 BBOF1Q8ND07 529 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 GSDMCQ9BYG8 508 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 EIF2B3Q9NR50 452 aaKnown RBP13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 RAB6BQ9NRW1 208 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 SMOXQ9NWM0 555 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 MOSPD1Q9UJG1 213 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 APPL1Q9UKG1 709 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 DOLKQ9UPQ8 538 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 TMEM98Q9Y2Y6 226 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 ARL5AQ9Y689 179 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 OAS3Q9Y6K5 1087 aaKnown RBP13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 BPTFQ12830 3046 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 NAV2Q8IVL1 2488 aa13.1□□□□□ -0.31
TGFBR3-203ENST00000417833 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 GLYATL1P3A0A0U1RQE8 302 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 EME2A4GXA9 379 aaPredicted RBP13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 AGAP14A8MT82 685 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 H7C0S8 307 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 GAPDHSO14556 408 aaPredicted RBP13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 CHUKO15111 745 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 VEGFDO43915 354 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 NUAK1O60285 661 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 ASMTLO95671 621 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 SLC4A1P02730 911 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 CELA2BP08218 269 aaPredicted RBP13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 ZSCAN5DPP0CG00 497 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 HADHAP40939 763 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 GNPDA1P46926 289 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 ZNF140P52738 457 aaPredicted RBP13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 MRPS25P82663 173 aaKnown RBP13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 DAB2P98082 770 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 CDK16Q00536 496 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 E2F1Q01094 437 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 CDH17Q12864 832 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 ILF3Q12906 894 aaKnown RBP eCLIP13.09□□□□□ -0.312e-9■■■■■ 37
TGFBR3-203ENST00000417833 LAMB3Q13751 1172 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 ITGA9Q13797 1035 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 HLTFQ14527 1009 aaKnown RBP eCLIP13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 NR0B2Q15466 257 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 SMAD1Q15797 465 aaKnown RBP13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 ATP13A5Q4VNC0 1218 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 BEND6Q5SZJ8 279 aaPredicted RBP13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 TAF8Q7Z7C8 310 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 PRUNE1Q86TP1 453 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 TRIM74Q86UV6 250 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 PHYKPLQ8IUZ5 450 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 ARL10Q8N8L6 244 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 PNPLA1Q8N8W4 532 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 GPR156Q8NFN8 814 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 OR4K2Q8NGD2 314 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 OR6C4Q8NGE1 309 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 AENQ8WTP8 325 aaKnown RBP13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 PTCD2Q8WV60 388 aaKnown RBP13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 IFT81Q8WYA0 676 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 OR2M4Q96R27 311 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 TRIM51Q9BSJ1 452 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 ATXN10Q9UBB4 475 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 TMPRSS11EQ9UL52 423 aa13.09□□□□□ -0.31
TGFBR3-203ENST00000417833 ADAMTS20P59510 1910 aa13.08□□□□□ -0.32
TGFBR3-203ENST00000417833 MROH6A6NGR9 719 aa13.08□□□□□ -0.32
TGFBR3-203ENST00000417833 E7EVH7 732 aa13.08□□□□□ -0.32
TGFBR3-203ENST00000417833 AP3B1O00203 1094 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms