RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 DNMT3AQ9Y6K1 912 aaPredicted RBP17.33■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 DCHS1Q96JQ0 3298 aa17.33■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 SPTBN4Q9H254 2564 aa17.33■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 IGLV3-16A0A075B6K0 115 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 FAM237BA0A1B0GVD1 139 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 TRIM38O00635 465 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 TP73O15350 636 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 GRID2O43424 1007 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 KCNJ13O60928 360 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 AVILO75366 819 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 KCNK5O95279 499 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 ANXA6P08133 673 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 GNPDA1P46926 289 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 CLCNKAP51800 687 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 TERF1P54274 439 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 ILF3Q12906 894 aaKnown RBP eCLIP17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 C1orf61Q13536 156 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 TRIP6Q15654 476 aaKnown RBP17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 PROX2Q3B8N5 592 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 KHDC1Q4VXA5 237 aaKnown RBP17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 ZCCHC8Q6NZY4 707 aaKnown RBP17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 OGFOD3Q6PK18 319 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 AFTPHQ6ULP2 937 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 NRROSQ86YC3 692 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 NXPE1Q8N323 547 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 EID2Q8N6I1 236 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 DEFB124Q8NES8 71 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 HDAC10Q969S8 669 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 ZNF514Q96K75 400 aaPredicted RBP17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 SIGLEC10Q96LC7 697 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 CAMK1GQ96NX5 476 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 BOCQ9BWV1 1114 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 GSDMCQ9BYG8 508 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 SUDS3Q9H7L9 328 aaPredicted RBP17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 NCKIPSDQ9NZQ3 722 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 SLC2A6Q9UGQ3 507 aa17.32■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 CCDC162PA2VCL2 907 aa17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 GOLGA8MH3BSY2 632 aa17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 CCL22O00626 93 aa17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 GPR39O43194 453 aa17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 TNFSF14O43557 240 aa17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 SIGLEC6O43699 453 aa17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 LDOC1O95751 146 aaPredicted RBP17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 FOXN2P32314 431 aa17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 DRG2P55039 364 aaKnown RBP17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 CRADDP78560 199 aa17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 CTBSQ01459 385 aa17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 C6orf132Q5T0Z8 1188 aa17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 LYPLAL1Q5VWZ2 237 aa17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 DUPD1Q68J44 220 aa17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 CERS6Q6ZMG9 384 aa17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 TMEM135Q86UB9 458 aa17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 MMGT1Q8N4V1 131 aa17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 OR4L1Q8NH43 312 aa17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 GDAP1Q8TB36 358 aa17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 TTC25Q96NG3 672 aa17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 ZDHHC3Q9NYG2 299 aa17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 WHRNQ9P202 907 aa17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 ZNHIT2Q9UHR6 403 aa17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 CRLS1Q9UJA2 301 aa17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 GPSM3Q9Y4H4 160 aa17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 TDRD6O60522 2096 aaKnown RBP17.31■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 MYLKQ15746 1914 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 DCDC2BA2VCK2 349 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 KLHL33A6NCF5 533 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 KMOO15229 486 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 MTX2O75431 263 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 GOT2P00505 430 aaKnown RBP17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 CELA2BP08218 269 aaPredicted RBP17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 RALBP11234 206 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 MSH3P20585 1137 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 ACRV1P26436 265 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 NMBRP28336 390 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 RPL21P46778 160 aaKnown RBP17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 NOVA1P51513 510 aaKnown RBP17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 ITGA8P53708 1063 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 PRAMEP78395 509 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 GTF2H3Q13889 308 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 ITIH4Q14624 930 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 DNAJC21Q5F1R6 531 aaKnown RBP17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 ZRANB3Q5FWF4 1079 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 ZNF648Q5T619 568 aaPredicted RBP17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 KIAA0930Q6ICG6 404 aaPredicted RBP17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 MARK2Q7KZI7 788 aaKnown RBP17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 TAF8Q7Z7C8 310 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 LRRTM4Q86VH4 590 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 ZNF547Q8IVP9 402 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 RASGEF1AQ8N9B8 481 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 LRRC39Q96DD0 335 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 CNDP2Q96KP4 475 aaKnown RBP17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 COPS8Q99627 209 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 TIMM29Q9BSF4 260 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 NAT9Q9BTE0 207 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 RAB17Q9H0T7 212 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 ARFGAP3Q9NP61 516 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 SAMD15Q9P1V8 674 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 FTSJ1Q9UET6 329 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 ANAPC5Q9UJX4 755 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 DOLKQ9UPQ8 538 aa17.3■□□□□ 0.36
COMMD3-BMI1-201ENST00000417470 UTP11Q9Y3A2 253 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms