RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 BICRALQ6AI39 1079 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 RINT1Q6NUQ1 792 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 SCARA5Q6ZMJ2 495 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 C1orf186Q6ZWK4 172 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 FRA10AC1Q70Z53 315 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 USP37Q86T82 979 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 SYVN1Q86TM6 617 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 LINC00346Q8IVM7 164 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 CCDC103Q8IW40 242 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 GPR65Q8IYL9 337 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 LINC00518Q8N0U6 118 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 WDTC1Q8N5D0 677 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 SNX31Q8N9S9 440 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 KBTBD3Q8NAB2 608 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 RBM15BQ8NDT2 890 aaKnown RBP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 NLGN2Q8NFZ4 835 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 OR6B3Q8NGW1 331 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 IL31RAQ8NI17 732 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 EXOC6Q8TAG9 804 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 BBS10Q8TAM1 723 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 CHURC1Q8WUH1 139 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 WDR60Q8WVS4 1066 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 PRPF31Q8WWY3 499 aaKnown RBP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 NCSTNQ92542 709 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 SPSB4Q96A44 273 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 OTUB2Q96DC9 234 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 CCDC51Q96ER9 411 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 ZDHHC12Q96GR4 267 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 SERAC1Q96JX3 654 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 PHACTR3Q96KR7 559 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 GDAP1L1Q96MZ0 367 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 GCNAQ96QF7 691 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 REEP2Q9BRK0 252 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 CCDC28BQ9BUN5 200 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 EFHD1Q9BUP0 239 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 CACNG6Q9BXT2 260 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 POTEKPQ9BYX7 375 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 IMPG2Q9BZV3 1241 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 TRIM31Q9BZY9 425 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 FAM192AQ9GZU8 254 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 GOLPH3LQ9H4A5 285 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 OSGEPL1Q9H4B0 414 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 ASB8Q9H765 288 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 METTL8Q9H825 291 aaKnown RBP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 EVA1AQ9H8M9 152 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 ZNF287Q9HBT7 754 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 MAGEE1Q9HCI5 957 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 MRPL47Q9HD33 250 aaKnown RBP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 SEPSECSQ9HD40 501 aaKnown RBP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 PALMDQ9NP74 551 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 LTB4R2Q9NPC1 389 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 DMAP1Q9NPF5 467 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 PRMT8Q9NR22 394 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 CYP26B1Q9NR63 512 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 FAM212BQ9NTI7 297 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 PLA2G3Q9NZ20 509 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 SMARCAL1Q9NZC9 954 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 VSX1Q9NZR4 365 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 HACD3Q9P035 362 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 IGSF9Q9P2J2 1179 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 TUBD1Q9UJT1 453 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 TINAGQ9UJW2 476 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 GMEB2Q9UKD1 530 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 INTS6Q9UL03 887 aaKnown RBP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 PCDHA6Q9UN73 950 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 NCKAP1Q9Y2A7 1128 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 MRPS7Q9Y2R9 242 aaKnown RBP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 PLLPQ9Y342 182 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 HBS1LQ9Y450 684 aaKnown RBP3.62□□□□□ -1.83
SF3B1-203ENST00000414174 PCDHA8Q9Y5H6 950 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 NR2E3Q9Y5X4 410 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 NUMBLQ9Y6R0 609 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 RNF215Q9Y6U7 377 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 PARD3Q8TEW0 1356 aa3.62□□□□□ -1.83
SF3B1-203ENST00000414174 KIAA1107Q9UPP5 1409 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 TRBV23OR9-2A0A075B6M9 112 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 A0A088AWK7 358 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 A0A0B4J293 547 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 GABRR3A8MPY1 467 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 H0Y858 1186 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 LGALS8O00214 317 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 ARNTLO00327 626 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 LAD1O00515 517 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 HGSO14964 777 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 DCLK1O15075 740 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 SMAD9O15198 467 aaKnown RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 INPPL1O15357 1258 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 SLC16A6O15403 523 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 SLC16A3O15427 465 aaKnown RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 PRPF4O43172 522 aaKnown RBP eCLIP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 TGM5O43548 720 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 CALUO43852 315 aaPredicted RBP3.61□□□□□ -1.83
SF3B1-203ENST00000414174 PFDN1O60925 122 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 ATP9AO75110 1047 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 DNAJB6O75190 326 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 NDUFS2O75306 463 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 TOM1L1O75674 476 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 GPX5O75715 221 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 PSMD10O75832 226 aa3.61□□□□□ -1.83
SF3B1-203ENST00000414174 ZNF202O95125 648 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms