RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 ADIPOR2Q86V24 386 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 METTL23Q86XA0 190 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 FOXRED2Q8IWF2 684 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 TTC30BQ8N4P2 665 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 GPATCH11Q8N954 259 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 XXYLT1Q8NBI6 393 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 CAMKVQ8NCB2 501 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 SETD6Q8TBK2 473 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 HDAC11Q96DB2 347 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 URB1-AS1Q96HZ7 61 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 TXNDC15Q96J42 360 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 CFAP57Q96MR6 1250 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 DESI2Q9BSY9 194 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 NUP85Q9BW27 656 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 PLAC1Q9HBJ0 212 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 IL36RNQ9UBH0 155 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 DDX25Q9UHL0 483 aaKnown RBP4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 TINAGQ9UJW2 476 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 WBP11Q9Y2W2 641 aaKnown RBP4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 SQORQ9Y6N5 450 aa4.74□□□□□ -1.65
HMGB3P31-201ENST00000413333 FLT1P17948 1338 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 A0A0B4J293 547 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 A0A0U1RQG5 324 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 ARHGEF37A1IGU5 675 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 SLC16A5O15375 505 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 ZBTB43O43298 467 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 NDUFS7O75251 213 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 SLU7O95391 586 aaKnown RBP4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 TGDSO95455 350 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 LCATP04180 440 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 ATP5BP06576 529 aaKnown RBP4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 VDRP11473 427 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 GP5P40197 560 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 APOBEC1P41238 236 aaKnown RBP4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 NUDT6P53370 316 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 SIRPAP78324 504 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 CTF1Q16619 201 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 KRTAP15-1Q3LI76 137 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 PPP6R3Q5H9R7 873 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 KCNT1Q5JUK3 1230 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 PAPPA-AS1Q5QFB9 102 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 DNTTIP2Q5QJE6 756 aaKnown RBP4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 ARMC4Q5T2S8 1044 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 PXDC1Q5TGL8 231 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 KRT39Q6A163 491 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 CAVIN1Q6NZI2 390 aaKnown RBP4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 WDR73Q6P4I2 378 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 PAPD4Q6PIY7 484 aaKnown RBP4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 TRAT1Q6PIZ9 186 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 SUSD1Q6UWL2 747 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 PET117Q6UWS5 81 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 CENPVQ7Z7K6 275 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 SNX32Q86XE0 403 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 IQCA1Q86XH1 822 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 AFAP1Q8N556 730 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 PCDH20Q8N6Y1 951 aaKnown RBP4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 EMC1Q8N766 993 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 PI4KAP1Q8N8J0 262 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 OR10S1Q8NGN2 331 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 TBC1D16Q8TBP0 767 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 PIGOQ8TEQ8 1089 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 OIT3Q8WWZ8 545 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 NXNL1Q96CM4 212 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 DACH2Q96NX9 599 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 CMKLR1Q99788 373 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 THUMPD3Q9BV44 507 aaKnown RBP4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 GPR88Q9GZN0 384 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 SPRTNQ9H040 489 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 FOXP1Q9H334 677 aaPredicted RBP4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 CNOT10Q9H9A5 744 aaKnown RBP4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 C17orf75Q9HAS0 396 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 RASAL2Q9UJF2 1139 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 KLHL20Q9Y2M5 609 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 INSL5Q9Y5Q6 135 aa4.73□□□□□ -1.65
HMGB3P31-201ENST00000413333 ATXN2Q99700 1313 aaKnown RBP4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 A0A1B0GVT2 93 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 TMEM189-UBE2V1I3L0A0 370 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 J3QR06 171 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 SOCS6O14544 535 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 PRAMEF11O60813 436 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 ZNF217O75362 1048 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 CH25HO95992 272 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 PENKP01210 267 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 HRH2P25021 359 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 TLX1P31314 330 aaPredicted RBP4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 GABRA5P31644 462 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 NPY4RP50391 375 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 MXI1P50539 228 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 HNRNPH2P55795 449 aaKnown RBP4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 TAS2R38P59533 333 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 CD81P60033 236 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 PLIN5Q00G26 463 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 UBE2V1Q13404 147 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 ATP13A5Q4VNC0 1218 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 MORN5Q5VZ52 161 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 ZDHHC20Q5W0Z9 365 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 ALS2CLQ60I27 953 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 FRG2Q64ET8 278 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 RGMBQ6NW40 437 aa4.72□□□□□ -1.65
HMGB3P31-201ENST00000413333 DLK2Q6UY11 383 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms