RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 VEGFDO43915 354 aa18.61■□□□□ 0.57
TRIM56-202ENST00000412507 PPFIA2O75334 1257 aa18.61■□□□□ 0.57
TRIM56-202ENST00000412507 CDK14O94921 469 aa18.61■□□□□ 0.57
TRIM56-202ENST00000412507 MPOP05164 745 aa18.61■□□□□ 0.57
TRIM56-202ENST00000412507 STIP1P31948 543 aaKnown RBP18.61■□□□□ 0.57
TRIM56-202ENST00000412507 PDX1P52945 283 aa18.61■□□□□ 0.57
TRIM56-202ENST00000412507 BIRC2Q13490 618 aa18.61■□□□□ 0.57
TRIM56-202ENST00000412507 SIX1Q15475 284 aaPredicted RBP18.61■□□□□ 0.57
TRIM56-202ENST00000412507 P3H1Q32P28 736 aa18.61■□□□□ 0.57
TRIM56-202ENST00000412507 PLA2G4EQ3MJ16 856 aa18.61■□□□□ 0.57
TRIM56-202ENST00000412507 CRTC3Q6UUV7 619 aa18.61■□□□□ 0.57
TRIM56-202ENST00000412507 BRSK1Q8TDC3 778 aa18.61■□□□□ 0.57
TRIM56-202ENST00000412507 LRRC40Q9H9A6 602 aa18.61■□□□□ 0.57
TRIM56-202ENST00000412507 ARNT2Q9HBZ2 717 aa18.61■□□□□ 0.57
TRIM56-202ENST00000412507 TBC1D29Q9UFV1 150 aa18.61■□□□□ 0.57
TRIM56-202ENST00000412507 RAXQ9Y2V3 346 aa18.61■□□□□ 0.57
TRIM56-202ENST00000412507 GPR89AB7ZAQ6 455 aa18.6■□□□□ 0.57
TRIM56-202ENST00000412507 D6RAR5 112 aa18.6■□□□□ 0.57
TRIM56-202ENST00000412507 PPM1DO15297 605 aa18.6■□□□□ 0.57
TRIM56-202ENST00000412507 BRINP1O60477 761 aa18.6■□□□□ 0.57
TRIM56-202ENST00000412507 SNX2O60749 519 aa18.6■□□□□ 0.57
TRIM56-202ENST00000412507 KRT37O76014 449 aa18.6■□□□□ 0.57
TRIM56-202ENST00000412507 IFNB1P01574 187 aa18.6■□□□□ 0.57
TRIM56-202ENST00000412507 GPR89BP0CG08 455 aa18.6■□□□□ 0.57
TRIM56-202ENST00000412507 CXCR5P32302 372 aa18.6■□□□□ 0.57
TRIM56-202ENST00000412507 OR1D5P58170 312 aa18.6■□□□□ 0.57
TRIM56-202ENST00000412507 B4GALNT1Q00973 533 aa18.6■□□□□ 0.57
TRIM56-202ENST00000412507 TMEM115Q12893 351 aaPredicted RBP18.6■□□□□ 0.57
TRIM56-202ENST00000412507 ITGA9Q13797 1035 aa18.6■□□□□ 0.57
TRIM56-202ENST00000412507 C3orf38Q5JPI3 329 aa18.6■□□□□ 0.57
TRIM56-202ENST00000412507 B3GNT8Q7Z7M8 397 aa18.6■□□□□ 0.57
TRIM56-202ENST00000412507 PRUNE1Q86TP1 453 aa18.6■□□□□ 0.57
TRIM56-202ENST00000412507 LRRTM4Q86VH4 590 aa18.6■□□□□ 0.57
TRIM56-202ENST00000412507 OR13C4Q8NGS5 318 aa18.6■□□□□ 0.57
TRIM56-202ENST00000412507 KLC4Q9NSK0 619 aa18.6■□□□□ 0.57
TRIM56-202ENST00000412507 SLC23A2Q9UGH3 650 aa18.6■□□□□ 0.57
TRIM56-202ENST00000412507 FKBPLQ9UIM3 349 aa18.6■□□□□ 0.57
TRIM56-202ENST00000412507 KMOO15229 486 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 PSMD3O43242 534 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 B4GAT1O43505 415 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 CEP104O60308 925 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 CRTAMO95727 393 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 AP2A1O95782 977 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 FGGP02679 453 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 ETS1P14921 441 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 ZNF7P17097 686 aaPredicted RBP18.59■□□□□ 0.57
TRIM56-202ENST00000412507 TPH1P17752 444 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 ALDH4A1P30038 563 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 GABREP78334 506 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 TMPRSS15P98073 1019 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 GTF2H3Q13889 308 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 INSCQ1MX18 579 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 ZNF438Q7Z4V0 828 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 ZNF547Q8IVP9 402 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 SFRP1Q8N474 314 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 ZNF398Q8TD17 642 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 SLC37A2Q8TED4 501 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 GRAMD1AQ96CP6 724 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 FOXP3Q9BZS1 431 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 KCNF1Q9H3M0 494 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 OSGEPL1Q9H4B0 414 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 POLR1BQ9H9Y6 1135 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 PIH1D1Q9NWS0 290 aaKnown RBP18.59■□□□□ 0.57
TRIM56-202ENST00000412507 FEZ2Q9UHY8 353 aaPredicted RBP18.59■□□□□ 0.57
TRIM56-202ENST00000412507 SATB2Q9UPW6 733 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 LAMA5O15230 3695 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 ZFHX4Q86UP3 3567 aa18.59■□□□□ 0.57
TRIM56-202ENST00000412507 A0A1W2PNU3 283 aaPredicted RBP18.58■□□□□ 0.56
TRIM56-202ENST00000412507 TLX3O43711 291 aaPredicted RBP18.58■□□□□ 0.56
TRIM56-202ENST00000412507 PRAMEF1O95521 474 aa18.58■□□□□ 0.56
TRIM56-202ENST00000412507 LSSP48449 732 aa18.58■□□□□ 0.56
TRIM56-202ENST00000412507 ZNF140P52738 457 aaPredicted RBP18.58■□□□□ 0.56
TRIM56-202ENST00000412507 PDE1BQ01064 536 aa18.58■□□□□ 0.56
TRIM56-202ENST00000412507 CCNG2Q16589 344 aa18.58■□□□□ 0.56
TRIM56-202ENST00000412507 AMZ1Q400G9 498 aa18.58■□□□□ 0.56
TRIM56-202ENST00000412507 LDLRAP1Q5SW96 308 aa18.58■□□□□ 0.56
TRIM56-202ENST00000412507 GPRC6AQ5T6X5 926 aa18.58■□□□□ 0.56
TRIM56-202ENST00000412507 REXO1L1PQ8IX06 675 aa18.58■□□□□ 0.56
TRIM56-202ENST00000412507 GLIS1Q8NBF1 620 aa18.58■□□□□ 0.56
TRIM56-202ENST00000412507 DDHD1Q8NEL9 900 aa18.58■□□□□ 0.56
TRIM56-202ENST00000412507 TTC25Q96NG3 672 aa18.58■□□□□ 0.56
TRIM56-202ENST00000412507 ASB8Q9H765 288 aa18.58■□□□□ 0.56
TRIM56-202ENST00000412507 ETNK1Q9HBU6 452 aa18.58■□□□□ 0.56
TRIM56-202ENST00000412507 EPB41L5Q9HCM4 733 aa18.58■□□□□ 0.56
TRIM56-202ENST00000412507 PRDM8Q9NQV8 689 aa18.58■□□□□ 0.56
TRIM56-202ENST00000412507 DNAJC16Q9Y2G8 782 aa18.58■□□□□ 0.56
TRIM56-202ENST00000412507 PMS2P1A4D2B8 440 aa18.57■□□□□ 0.56
TRIM56-202ENST00000412507 A6NCN8 305 aa18.57■□□□□ 0.56
TRIM56-202ENST00000412507 CCL22O00626 93 aa18.57■□□□□ 0.56
TRIM56-202ENST00000412507 LDB2O43679 373 aa18.57■□□□□ 0.56
TRIM56-202ENST00000412507 SRP72O76094 671 aaKnown RBP18.57■□□□□ 0.56
TRIM56-202ENST00000412507 F3P13726 295 aa18.57■□□□□ 0.56
TRIM56-202ENST00000412507 ACTN2P35609 894 aa18.57■□□□□ 0.56
TRIM56-202ENST00000412507 FDFT1P37268 417 aa18.57■□□□□ 0.56
TRIM56-202ENST00000412507 CLCNKAP51800 687 aa18.57■□□□□ 0.56
TRIM56-202ENST00000412507 INHBCP55103 352 aa18.57■□□□□ 0.56
TRIM56-202ENST00000412507 XIAPP98170 497 aa18.57■□□□□ 0.56
TRIM56-202ENST00000412507 POU6F1Q14863 301 aa18.57■□□□□ 0.56
TRIM56-202ENST00000412507 NR1D2Q14995 579 aa18.57■□□□□ 0.56
TRIM56-202ENST00000412507 LONRF2Q1L5Z9 754 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms