RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 HMMRO75330 724 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 NDUFB4O95168 129 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 IPO7O95373 1038 aaKnown RBP5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 VNN2O95498 520 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 FAM90A13PP0C7W8 464 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 FAM90A24PP0C7X0 464 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 CHATP28329 748 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 LINC00205P59089 165 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 SLC15A2Q16348 729 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 EIF2S3LQ2VIR3 472 aaKnown RBP5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 RABL6Q3YEC7 729 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 GKAP1Q5VSY0 366 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 DAB2IPQ5VWQ8 1189 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 AWAT2Q6E213 333 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 TYW3Q6IPR3 259 aaKnown RBP5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 CFAP161Q6P656 301 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 CCDC129Q6ZRS4 1044 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 CENPQQ7L2Z9 268 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 FASTKD5Q7L8L6 764 aaKnown RBP5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 PPP1R42Q7Z4L9 355 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 PCGF5Q86SE9 256 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 AADATQ8N5Z0 425 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 SCCPDHQ8NBX0 429 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 OR14L1PQ8NHC6 308 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 SCARB1Q8WTV0 552 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 SLC41A2Q96JW4 573 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 C1orf74Q96LT6 269 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 CMTM3Q96MX0 182 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 FAM110AQ9BQ89 295 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 DCLK3Q9C098 648 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 KCNN2Q9H2S1 579 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 RWDD1Q9H446 243 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 SLC28A3Q9HAS3 691 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 RANGRFQ9HD47 186 aaPredicted RBP5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 HAUS2Q9NVX0 235 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 IL36RNQ9UBH0 155 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 TBC1D29Q9UFV1 150 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 RCOR1Q9UKL0 485 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 LYVE1Q9Y5Y7 322 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 STON1Q9Y6Q2 735 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 RIC1Q4ADV7 1423 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 A0A1B0GUL6 1792 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 AK9Q5TCS8 1911 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 TAF1P21675 1872 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 ANKRD31Q8N7Z5 1873 aa5.03□□□□□ -1.6
HMGB3P19-201ENST00000403971 SPEF2Q9C093 1822 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 KIF13BQ9NQT8 1826 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 UBN2Q6ZU65 1347 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 IGHV4-28A0A0C4DH34 117 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 FRMD3A2A2Y4 597 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 DYTNA2CJ06 578 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 A6NCN8 305 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 PTGES3LE9PB15 166 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 GTPBP1O00178 669 aaKnown RBP5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 ASAP2O43150 1006 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 HSPA12AO43301 675 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 FTCDO95954 541 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 IGKV2-30P06310 120 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 ZNF182P17025 639 aaPredicted RBP5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 SCP2P22307 547 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 BDNFP23560 247 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 RPL3P39023 403 aaKnown RBP5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 GARSP41250 739 aaKnown RBP5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 MXI1P50539 228 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 NIPAL4Q0D2K0 466 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 Q0VFX4 171 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 NEDD9Q14511 834 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 SHBQ15464 509 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 EFNB3Q15768 340 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 CDONQ4KMG0 1287 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 SLC10A5Q5PT55 438 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 C6orf141Q5SZD1 244 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 CLEC17AQ6ZS10 378 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 DEFB132Q7Z7B7 95 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 AGBL3Q8NEM8 1001 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 SCFD2Q8WU76 684 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 TXNDC15Q96J42 360 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 TIGD1Q96MW7 591 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 TMEM47Q9BQJ4 181 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 NYXQ9GZU5 481 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 DCTPP1Q9H773 170 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 KAT14Q9H8E8 782 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 MRPL44Q9H9J2 332 aaKnown RBP5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 CDC14AQ9UNH5 594 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 GPR34Q9UPC5 381 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 NIP7Q9Y221 180 aaKnown RBP eCLIP5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 CARMIL3Q8ND23 1372 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 RTL9Q8NET4 1388 aa5.02□□□□□ -1.61
HMGB3P19-201ENST00000403971 DLEC1Q9Y238 1755 aa5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 SH3TC1Q8TE82 1336 aa5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 CACNA1SQ13698 1873 aa5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 C1orf226A1L170 272 aa5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 MYO1GB0I1T2 1018 aa5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 INO80B-WBP1J3KQ70 363 aa5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 VCYO14598 125 aa5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 ZIC3O60481 467 aa5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 GJB3O75712 270 aa5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 GPTP24298 496 aa5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 ITGB8P26012 769 aa5.01□□□□□ -1.61
HMGB3P19-201ENST00000403971 HOXD3P31249 432 aaPredicted RBP5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms