RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 NLE1Q9NVX2 485 aaPredicted RBP18.97■□□□□ 0.63
RTN4-207ENST00000402434 NEU2Q9Y3R4 380 aa18.97■□□□□ 0.63
RTN4-207ENST00000402434 PLXNB3Q9ULL4 1909 aa18.97■□□□□ 0.63
RTN4-207ENST00000402434 ZFC3H1O60293 1989 aaKnown RBP18.97■□□□□ 0.63
RTN4-207ENST00000402434 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.97■□□□□ 0.63
RTN4-207ENST00000402434 B4DGG1 531 aa18.97■□□□□ 0.63
RTN4-207ENST00000402434 GAS8O95995 478 aa18.97■□□□□ 0.63
RTN4-207ENST00000402434 CDK16Q00536 496 aa18.97■□□□□ 0.63
RTN4-207ENST00000402434 NFATC2Q13469 925 aa18.97■□□□□ 0.63
RTN4-207ENST00000402434 HLTFQ14527 1009 aaKnown RBP eCLIP18.97■□□□□ 0.631e-8■■□□□ 13
RTN4-207ENST00000402434 C14orf28Q4W4Y0 310 aa18.97■□□□□ 0.63
RTN4-207ENST00000402434 PERM1Q5SV97 790 aa18.97■□□□□ 0.63
RTN4-207ENST00000402434 CERCAMQ5T4B2 595 aa18.97■□□□□ 0.63
RTN4-207ENST00000402434 GPRC6AQ5T6X5 926 aa18.97■□□□□ 0.63
RTN4-207ENST00000402434 PPP1R21Q6ZMI0 780 aa18.97■□□□□ 0.63
RTN4-207ENST00000402434 ZNF547Q8IVP9 402 aa18.97■□□□□ 0.63
RTN4-207ENST00000402434 GDAP1Q8TB36 358 aa18.97■□□□□ 0.63
RTN4-207ENST00000402434 ZDHHC1Q8WTX9 485 aa18.97■□□□□ 0.63
RTN4-207ENST00000402434 STYXQ8WUJ0 223 aa18.97■□□□□ 0.63
RTN4-207ENST00000402434 DNAJC1Q96KC8 554 aaKnown RBP18.97■□□□□ 0.63
RTN4-207ENST00000402434 NAPGQ99747 312 aaPredicted RBP18.97■□□□□ 0.63
RTN4-207ENST00000402434 GOLGA6L10A0A0M3HER8 536 aa18.96■□□□□ 0.63
RTN4-207ENST00000402434 CTAGE9A4FU28 777 aa18.96■□□□□ 0.63
RTN4-207ENST00000402434 KMOO15229 486 aa18.96■□□□□ 0.63
RTN4-207ENST00000402434 FANCGO15287 622 aa18.96■□□□□ 0.63
RTN4-207ENST00000402434 NUDT21O43809 227 aaKnown RBP18.96■□□□□ 0.63
RTN4-207ENST00000402434 PHF2O75151 1096 aa18.96■□□□□ 0.63
RTN4-207ENST00000402434 GLB1P16278 677 aa18.96■□□□□ 0.63
RTN4-207ENST00000402434 FNTAP49354 379 aa18.96■□□□□ 0.63
RTN4-207ENST00000402434 CLCNKAP51800 687 aa18.96■□□□□ 0.63
RTN4-207ENST00000402434 BASP1P80723 227 aaKnown RBP18.96■□□□□ 0.63
RTN4-207ENST00000402434 HES3Q5TGS1 186 aa18.96■□□□□ 0.63
RTN4-207ENST00000402434 LRRTM4Q86VH4 590 aa18.96■□□□□ 0.63
RTN4-207ENST00000402434 CREG2Q8IUH2 290 aa18.96■□□□□ 0.63
RTN4-207ENST00000402434 NAGSQ8N159 534 aa18.96■□□□□ 0.63
RTN4-207ENST00000402434 TTC25Q96NG3 672 aa18.96■□□□□ 0.63
RTN4-207ENST00000402434 RANBP9Q96S59 729 aa18.96■□□□□ 0.63
RTN4-207ENST00000402434 TMEM121BQ9BXQ6 578 aaPredicted RBP18.96■□□□□ 0.63
RTN4-207ENST00000402434 ABCG4Q9H172 646 aa18.96■□□□□ 0.63
RTN4-207ENST00000402434 ASB8Q9H765 288 aa18.96■□□□□ 0.63
RTN4-207ENST00000402434 RIMKLBQ9ULI2 386 aa18.96■□□□□ 0.63
RTN4-207ENST00000402434 SAR1BQ9Y6B6 198 aa18.96■□□□□ 0.63
RTN4-207ENST00000402434 PRR19A6NJB7 356 aa18.95■□□□□ 0.62
RTN4-207ENST00000402434 KRT14P02533 472 aa18.95■□□□□ 0.62
RTN4-207ENST00000402434 ACP5P13686 325 aa18.95■□□□□ 0.62
RTN4-207ENST00000402434 PNLIPP16233 465 aa18.95■□□□□ 0.62
RTN4-207ENST00000402434 TPSB2P20231 275 aa18.95■□□□□ 0.62
RTN4-207ENST00000402434 MAGEA6P43360 314 aa18.95■□□□□ 0.62
RTN4-207ENST00000402434 CLDN6P56747 220 aa18.95■□□□□ 0.62
RTN4-207ENST00000402434 TMPRSS15P98073 1019 aa18.95■□□□□ 0.62
RTN4-207ENST00000402434 LAMB3Q13751 1172 aa18.95■□□□□ 0.62
RTN4-207ENST00000402434 SEPT6Q14141 434 aa18.95■□□□□ 0.62
RTN4-207ENST00000402434 TRIP13Q15645 432 aaPredicted RBP18.95■□□□□ 0.62
RTN4-207ENST00000402434 TPSAB1Q15661 275 aa18.95■□□□□ 0.62
RTN4-207ENST00000402434 SKIDA1Q1XH10 827 aa18.95■□□□□ 0.62
RTN4-207ENST00000402434 GPR33Q49SQ1 333 aa18.95■□□□□ 0.62
RTN4-207ENST00000402434 CDCP2Q5VXM1 449 aa18.95■□□□□ 0.62
RTN4-207ENST00000402434 SNX20Q7Z614 316 aa18.95■□□□□ 0.62
RTN4-207ENST00000402434 DCBLD1Q8N8Z6 715 aa18.95■□□□□ 0.62
RTN4-207ENST00000402434 RASGEF1AQ8N9B8 481 aa18.95■□□□□ 0.62
RTN4-207ENST00000402434 MAPK15Q8TD08 544 aa18.95■□□□□ 0.62
RTN4-207ENST00000402434 CDKN2AIPNLQ96HQ2 116 aa18.95■□□□□ 0.62
RTN4-207ENST00000402434 CCDC3Q9BQI4 270 aa18.95■□□□□ 0.62
RTN4-207ENST00000402434 ZCCHC2Q9C0B9 1178 aaKnown RBP18.95■□□□□ 0.62
RTN4-207ENST00000402434 SLC23A2Q9UGH3 650 aa18.95■□□□□ 0.62
RTN4-207ENST00000402434 RABGEF1Q9UJ41 708 aa18.95■□□□□ 0.62
RTN4-207ENST00000402434 MYLKQ15746 1914 aa18.95■□□□□ 0.62
RTN4-207ENST00000402434 AKAP13Q12802 2813 aa18.94■□□□□ 0.62
RTN4-207ENST00000402434 BPTFQ12830 3046 aa18.94■□□□□ 0.62
RTN4-207ENST00000402434 TRBV5-4A0A0C4DH59 114 aa18.94■□□□□ 0.62
RTN4-207ENST00000402434 HEATR9A2RTY3 570 aa18.94■□□□□ 0.62
RTN4-207ENST00000402434 FAM149AA5PLN7 773 aa18.94■□□□□ 0.62
RTN4-207ENST00000402434 CCL22O00626 93 aa18.94■□□□□ 0.62
RTN4-207ENST00000402434 ECEL1O95672 775 aa18.94■□□□□ 0.62
RTN4-207ENST00000402434 JUPP14923 745 aa18.94■□□□□ 0.62
RTN4-207ENST00000402434 ADRA1DP25100 572 aa18.94■□□□□ 0.62
RTN4-207ENST00000402434 GPS1Q13098 491 aa18.94■□□□□ 0.62
RTN4-207ENST00000402434 KCTD19Q17RG1 926 aaPredicted RBP18.94■□□□□ 0.62
RTN4-207ENST00000402434 CCDC38Q502W7 563 aa18.94■□□□□ 0.62
RTN4-207ENST00000402434 C11orf96Q7Z7L8 435 aa18.94■□□□□ 0.62
RTN4-207ENST00000402434 ARL14Q8N4G2 192 aa18.94■□□□□ 0.62
RTN4-207ENST00000402434 GATA6Q92908 595 aa18.94■□□□□ 0.62
RTN4-207ENST00000402434 CCDC74AQ96AQ1 378 aa18.94■□□□□ 0.62
RTN4-207ENST00000402434 ULK4Q96C45 1275 aa18.94■□□□□ 0.62
RTN4-207ENST00000402434 TIMM29Q9BSF4 260 aa18.94■□□□□ 0.62
RTN4-207ENST00000402434 LRIT1Q9P2V4 623 aa18.94■□□□□ 0.62
RTN4-207ENST00000402434 TBC1D29Q9UFV1 150 aa18.94■□□□□ 0.62
RTN4-207ENST00000402434 KCNK6Q9Y257 313 aa18.94■□□□□ 0.62
RTN4-207ENST00000402434 A6NCN8 305 aa18.93■□□□□ 0.62
RTN4-207ENST00000402434 AP3B1O00203 1094 aa18.93■□□□□ 0.62
RTN4-207ENST00000402434 ZNF7P17097 686 aaPredicted RBP18.93■□□□□ 0.62
RTN4-207ENST00000402434 ITGALP20701 1170 aa18.93■□□□□ 0.62
RTN4-207ENST00000402434 MC4RP32245 332 aa18.93■□□□□ 0.62
RTN4-207ENST00000402434 ACVR1Q04771 509 aa18.93■□□□□ 0.62
RTN4-207ENST00000402434 CAMK2BQ13554 666 aa18.93■□□□□ 0.62
RTN4-207ENST00000402434 GTF2H3Q13889 308 aa18.93■□□□□ 0.62
RTN4-207ENST00000402434 KCNJ11Q14654 390 aa18.93■□□□□ 0.62
RTN4-207ENST00000402434 CRTC3Q6UUV7 619 aa18.93■□□□□ 0.62
RTN4-207ENST00000402434 NLRP9Q7RTR0 991 aa18.93■□□□□ 0.62
RTN4-207ENST00000402434 MARCH9Q86YJ5 346 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms