RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 SLC25A14O95258 325 aaPredicted RBP12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 VAPBO95292 243 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 IVLP07476 585 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 CELA2BP08218 269 aaPredicted RBP12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 F7P08709 466 aaPredicted RBP12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ZNF8P17098 575 aaPredicted RBP12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PGAM1P18669 254 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ITGALP20701 1170 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 SRP54P61011 504 aaKnown RBP12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 IL9RQ01113 521 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 CACNG1Q06432 222 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 BNIP3Q12983 259 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PTK2BQ14289 1009 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 GPR33Q49SQ1 333 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ZRANB3Q5FWF4 1079 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 UNC5AQ6ZN44 842 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 LDB1Q86U70 411 aaPredicted RBP12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 SERPINA9Q86WD7 417 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ZNF547Q8IVP9 402 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PHACTR4Q8IZ21 702 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 RASGEF1AQ8N9B8 481 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 FBXO36Q8NEA4 188 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 OR4L1Q8NH43 312 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 EDEM2Q9BV94 578 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 GTPBP2Q9BX10 602 aaKnown RBP12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PHACTR1Q9C0D0 580 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 OR2AG1Q9H205 316 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 GAREM1Q9H706 876 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 TRIM39Q9HCM9 518 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 SAYSD1Q9NPB0 183 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 VPS18Q9P253 973 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 KLQ9UEF7 1012 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 SLC30A1Q9Y6M5 507 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 DGKBQ9Y6T7 804 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 FAM169AQ9Y6X4 670 aa12.28□□□□□ -0.44
HLA-DQB1-203ENST00000399082 CHUKO15111 745 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 EIF3HO15372 352 aaKnown RBP eCLIP12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 PIAS2O75928 621 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 C1QAP02745 245 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 SYPP08247 313 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 GIMD1P0DJR0 217 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 MYBL2P10244 700 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 KELP23276 732 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ACRV1P26436 265 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 HTR1BP28222 390 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 EPHA8P29322 1005 aaPredicted RBP12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 HK3P52790 923 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CTSCP53634 463 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 GPX6P59796 221 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 PRAMEP78395 509 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 PPARDQ03181 441 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 PYCR3Q53H96 274 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 LDLRAP1Q5SW96 308 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 TRMT10BQ6PF06 316 aaKnown RBP12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 XKR5Q6UX68 686 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CENPUQ71F23 418 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 MARK2Q7KZI7 788 aaKnown RBP12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 C11orf96Q7Z7L8 435 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ZBED8Q8IZ13 594 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 OR6P1Q8NGX9 317 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CCL4L1Q8NHW4 92 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 IFT81Q8WYA0 676 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 SKA1Q96BD8 255 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 LRRC61Q9BV99 259 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CLPBQ9H078 707 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 TM7SF3Q9NS93 570 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 DNAAF2Q9NVR5 837 aaKnown RBP12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 UCKL1Q9NWZ5 548 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 DNAJC28Q9NX36 388 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 SLC17A6Q9P2U8 582 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ZC3H7BQ9UGR2 993 aaKnown RBP12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CRLS1Q9UJA2 301 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 SUFUQ9UMX1 484 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 PRKAB1Q9Y478 270 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 PLEKHM1Q9Y4G2 1056 aa12.27□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ASCC3Q8N3C0 2202 aaKnown RBP12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ARID1BQ8NFD5 2236 aaPredicted RBP12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 PRR19A6NJB7 356 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CD3EAPO15446 510 aaKnown RBP12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 NUAK1O60285 661 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 OR1I1O60431 355 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 SDC3O75056 442 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 RASGRP1O95267 797 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CER1O95813 267 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 POLBP06746 335 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 JUNDP17535 347 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 DGKAP23743 735 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 PLA2G5P39877 138 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 TMEM115Q12893 351 aaPredicted RBP12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 TCEA2Q15560 299 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 TYSND1Q2T9J0 566 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 ZNF789Q5FWF6 425 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 SPANXN3Q5MJ09 141 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 IL27RAQ6UWB1 636 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 CCDC25Q86WR0 208 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 NRROSQ86YC3 692 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 HID1Q8IV36 788 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 GSPT2Q8IYD1 628 aaKnown RBP12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 SLC25A45Q8N413 288 aa12.26□□□□□ -0.45
HLA-DQB1-203ENST00000399082 OXR1Q8N573 874 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms